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PDB: 180 results

2V33
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BU of 2v33 by Molmil
High resolution crystal structure of domain III of E1 fusion glycoprotein of Semliki Forest Virus
Descriptor: E1 ENVELOPE GLYCOPROTEIN, NITRATE ION
Authors:Vaney, M.C, Rey, F.A.
Deposit date:2007-06-11
Release date:2008-07-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:High Resolution Structure of Domain III from Class II Fusion Protein of Semliki Forest Virus
To be Published
6ESC
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BU of 6esc by Molmil
Crystal structure of Pseudorabies virus glycoprotein B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein B, GLYCEROL
Authors:Backovic, M, Vaney, M.C, Rey, F.A, Haouz, A.
Deposit date:2017-10-20
Release date:2017-11-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-Function Dissection of Pseudorabies Virus Glycoprotein B Fusion Loops.
J.Virol., 92, 2018
6EGU
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BU of 6egu by Molmil
Structure of RVFV envelope protein Gc in postfusion conformation in complex with 1,2-dipropionyl-sn-glycero-3-phosphocholine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, RVFV ENVELOPE PROTEIN GC, [(2R)-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-2-propanoyloxy-propyl] propanoate, ...
Authors:Guardado-Calvo, P, Rey, F.A.
Deposit date:2017-09-12
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A glycerophospholipid-specific pocket in the RVFV class II fusion protein drives target membrane insertion.
Science, 358, 2017
3DS1
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BU of 3ds1 by Molmil
HIV-1 capsid C-terminal domain mutant (E187A) in complex with an inhibitor of particle assembly (CAI)
Descriptor: HIV-1 CAPSID PROTEIN, Peptide Inhibitor of capsid assembly
Authors:Vaney, M.-C, Igonet, S, Rey, F.A.
Deposit date:2008-07-11
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
3DPH
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BU of 3dph by Molmil
HIV-1 capsid C-terminal domain mutant (L211S)
Descriptor: HIV-1 CAPSID PROTEIN
Authors:Igonet, S, Vaney, M.C, Rey, F.A.
Deposit date:2008-07-08
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
3DS3
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BU of 3ds3 by Molmil
HIV-1 capsid C-terminal domain mutant (Y169A) in complex with an inhibitor of particle assembly (CAI)
Descriptor: HIV-1 CAPSID PROTEIN, Peptide inhibitor of capsid assembly
Authors:Igonet, S, Vaney, M.C, Rey, F.A.
Deposit date:2008-07-11
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
3DS4
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BU of 3ds4 by Molmil
HIV-1 capsid C-terminal domain mutant (L211S) in complex with an inhibitor of particle assembly (CAI)
Descriptor: HIV-1 CAPSID PROTEIN, Peptide inhibitor of capsid assembly
Authors:Igonet, S, Vaney, M.C, Rey, F.A.
Deposit date:2008-07-11
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
1WCD
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BU of 1wcd by Molmil
Crystal structure of IBDV T1 virus-like particle reveals a missing link in icosahedral viruses evolution
Descriptor: MAJOR STRUCTURAL PROTEIN VP2
Authors:Coulibaly, F, Chevalier, C, Gutsche, I, Pous, J, Bressanelli, S, Navaza, J, Delmas, B, Rey, F.A.
Deposit date:2004-11-12
Release date:2005-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Birnavirus Crystal Structure Reveals Structural Relationships Among Icosahedral Viruses.
Cell(Cambridge,Mass.), 120, 2005
4UT6
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BU of 4ut6 by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 B7
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 B7, ...
Authors:Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4UTA
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BU of 4uta by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C8
Descriptor: BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 HEAVY CHAIN, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 LIGHT CHAIN, ENVELOPE GLYCOPROTEIN E, ...
Authors:Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4UT9
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BU of 4ut9 by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein dimer in complex with the ScFv fragment of the broadly neutralizing human antibody EDE1 C10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C10, ENVELOPE GLYCOPROTEIN E
Authors:Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4UTC
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BU of 4utc by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN E, ...
Authors:Kikuti, C, Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
3MKO
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BU of 3mko by Molmil
Crystal Structure of the Lymphocytic Choriomeningitis Virus Membrane Fusion Glycoprotein GP2 in its Postfusion Conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Glycoprotein C, ...
Authors:Igonet, S, Vaney, M.C, Rey, F.A.
Deposit date:2010-04-15
Release date:2011-04-20
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structure of the arenavirus glycoprotein GP2 in its postfusion hairpin conformation
Proc.Natl.Acad.Sci.USA, 108, 2011
3NFK
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BU of 3nfk by Molmil
Crystal structure of the PTPN4 PDZ domain complexed with the C-terminus of a rabies virus G protein
Descriptor: GLYCEROL, Glycoprotein G, Tyrosine-protein phosphatase non-receptor type 4
Authors:Babault, N, Cordier, F, Lafage, M, Cockburn, J, Haouz, A, Rey, F.A, Delepierre, M, Buc, H, Lafon, M, Wolff, N.
Deposit date:2010-06-10
Release date:2011-08-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Peptides Targeting the PDZ Domain of PTPN4 Are Efficient Inducers of Glioblastoma Cell Death.
Structure, 19, 2011
3NFL
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BU of 3nfl by Molmil
Crystal structure of the PTPN4 PDZ domain complexed with the C-terminus of the GluN2A NMDA receptor subunit
Descriptor: Glutamate [NMDA] receptor subunit epsilon-1, Tyrosine-protein phosphatase non-receptor type 4
Authors:Babault, N, Cordier, F, Lafage, M, Cockburn, J, Haouz, A, Rey, F.A, Delepierre, M, Buc, H, Lafon, M, Wolff, N.
Deposit date:2010-06-10
Release date:2011-08-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Peptides Targeting the PDZ Domain of PTPN4 Are Efficient Inducers of Glioblastoma Cell Death.
Structure, 19, 2011
3UAJ
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BU of 3uaj by Molmil
Crystal structure of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain, monoclonal antibody 5H2, ...
Authors:Cockburn, J.J.B, Stura, E.A, Navarro-Sanchez, M.E, Rey, F.A.
Deposit date:2011-10-21
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.232 Å)
Cite:Structural insights into the neutralization mechanism of a higher primate antibody against dengue virus.
Embo J., 31, 2012
3UC0
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BU of 3uc0 by Molmil
Crystal structure of domain I of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
Descriptor: GLYCEROL, Heavy chain, monoclonal antibody 5H2, ...
Authors:Cockburn, J.J.B, Stura, E.A, Navarro-Sanchez, M.E, Rey, F.A.
Deposit date:2011-10-25
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural insights into the neutralization mechanism of a higher primate antibody against dengue virus.
Embo J., 31, 2012
3UYP
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BU of 3uyp by Molmil
Crystal structure of the dengue virus serotype 4 envelope protein domain III in complex with the variable domains of Mab 4E11
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Envelope protein, GLYCEROL, ...
Authors:Cockburn, J.J.B, Navarro Sanchez, M.E, Fretes, N, Urvoas, A, Staropoli, I, Kikuti, C.M, Coffey, L.L, Arenzana Seisdedos, F, Bedouelle, H, Rey, F.A.
Deposit date:2011-12-06
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of dengue virus broad cross-neutralization by a monoclonal antibody.
Structure, 20, 2012
3UZE
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BU of 3uze by Molmil
Crystal structure of the dengue virus serotype 3 envelope protein domain III in complex with the variable domains of Mab 4E11
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Envelope protein, ...
Authors:Cockburn, J.J.B, Navarro Sanchez, M.E, Fretes, N, Urvoas, A, Staropoli, I, Kikuti, C.M, Coffey, L.L, Arenzana Seisdedos, F, Bedouelle, H, Rey, F.A.
Deposit date:2011-12-07
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Mechanism of dengue virus broad cross-neutralization by a monoclonal antibody.
Structure, 20, 2012
3UZV
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BU of 3uzv by Molmil
Crystal structure of the dengue virus serotype 2 envelope protein domain III in complex with the variable domains of Mab 4E11
Descriptor: ETHANOL, anti-dengue Mab 4E11, envelope protein
Authors:Cockburn, J.J.B, Navarro Sanchez, M.E, Fretes, N, Urvoas, A, Staropoli, I, Kikuti, C.M, Coffey, L.L, Arenzana Seisdedos, F, Bedouelle, H, Rey, F.A.
Deposit date:2011-12-07
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of dengue virus broad cross-neutralization by a monoclonal antibody.
Structure, 20, 2012
3UZQ
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BU of 3uzq by Molmil
Crystal structure of the dengue virus serotype 1 envelope protein domain III in complex with the variable domains of Mab 4E11
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Cockburn, J.J.B, Navarro Sanchez, M.E, Fretes, N, Urvoas, A, Staropoli, I, Kikuti, C.M, Coffey, L.L, Arenzana Seisdedos, F, Bedouelle, H, Rey, F.A.
Deposit date:2011-12-07
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanism of dengue virus broad cross-neutralization by a monoclonal antibody.
Structure, 20, 2012
5N0A
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BU of 5n0a by Molmil
Crystal structure of A259C covalently linked dengue 2 virus envelope glycoprotein dimer in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11
Descriptor: BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11 HEAVY CHAIN, Envelope Glycoprotein E, ...
Authors:Vaney, M.C, Rouvinski, A, Guardado-Calvo, P, Sharma, A, Rey, F.A.
Deposit date:2017-02-02
Release date:2017-06-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Covalently linked dengue virus envelope glycoprotein dimers reduce exposure of the immunodominant fusion loop epitope.
Nat Commun, 8, 2017
7Q3Q
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BU of 7q3q by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with the neutralizing nanobody VHH-12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Fernandez, I, Pederzoli, R, Rey, F.A.
Deposit date:2021-10-28
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:NANOBODIES AGAINST SARS-COV-2 NEUTRALIZE VARIANTS OF CONCERN AND EXPLORE CONFORMATIONAL DIFFERENCES ON THE SPIKE PROTEIN
To Be Published
7Q3R
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BU of 7q3r by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with the neutralizing nanobodies VHH-F04 and VHH-G09
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Spike glycoprotein, ...
Authors:Fernandez, I, Pederzoli, R, Rey, F.A.
Deposit date:2021-10-28
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:NANOBODIES AGAINST SARS-COV-2 NEUTRALIZE VARIANTS OF CONCERN AND EXPLORE CONFORMATIONAL DIFFERENCES ON THE SPIKE PROTEIN
To Be Published
8OFN
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BU of 8ofn by Molmil
Structure of the yellow fever virus (Asibi strain) dimeric envelope protein
Descriptor: Envelope glycoprotein, SULFATE ION
Authors:Covernton, E, Vaney, M.C, Barba-Spaeth, G, Rey, F.A.
Deposit date:2023-03-16
Release date:2023-08-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:New insight into flavivirus maturation from structure/function studies of the yellow fever virus envelope protein complex.
Mbio, 14, 2023

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