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PDB: 820 results

4B3E
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BU of 4b3e by Molmil
Structure of copper-zinc superoxide dismutase complexed with bicarbonate.
Descriptor: CARBONATE ION, COPPER (II) ION, SULFATE ION, ...
Authors:Strange, R.W, Hough, M.A, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2012-07-23
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Evidence for a Copper-Bound Carbonate Intermediate in the Peroxidase and Dismutase Activities of Superoxide Dismutase.
Plos One, 7, 2012
4CBY
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BU of 4cby by Molmil
Design, synthesis, and biological evaluation of potent and selective Class IIa HDAC inhibitors as a potential therapy for Huntington's disease
Descriptor: (1R,2R,3R)-2-[4-(1,3-oxazol-5-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide, HISTONE DEACETYLASE 4, SODIUM ION, ...
Authors:Burli, R.W, Luckhurst, C.A, Aziz, O, Matthews, K.L, Yates, D, Lyons, K.A, Beconi, M, McAllister, G, Breccia, P, Stott, A.J, Penrose, S.D, Wall, M, Lamers, M, Leonard, P, Mueller, I, Richardson, C.M, Jarvis, R, Stones, L, Hughes, S, Wishart, G, Haughan, A.F, O'Connell, C, Mead, T, McNeil, H, Vann, J, Mangette, J, Maillard, M, Beaumont, V, Munoz-Sanjuan, I, Dominguez, C.
Deposit date:2013-10-17
Release date:2013-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Design, synthesis, and biological evaluation of potent and selective class IIa histone deacetylase (HDAC) inhibitors as a potential therapy for Huntington's disease.
J. Med. Chem., 56, 2013
1PZQ
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BU of 1pzq by Molmil
Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS 2 and DEBS 3: The A domain
Descriptor: Erythronolide synthase
Authors:Broadhurst, R.W, Nietlispach, D, Wheatcroft, M.P, Leadlay, P.F, Weissman, K.J.
Deposit date:2003-07-14
Release date:2004-02-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of docking domains in modular polyketide synthases.
Chem.Biol., 10, 2003
4CHC
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BU of 4chc by Molmil
Crystal structure of the N-terminal domain of the PA subunit of Thogoto virus polymerase (form 2)
Descriptor: POLYMERASE ACIDIC PROTEIN
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
4CHE
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BU of 4che by Molmil
Crystal structure of the putative cap-binding domain of the PB2 subunit of Thogoto virus polymerase
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
4CGS
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BU of 4cgs by Molmil
Crystal structure of the N-terminal domain of the PA subunit of Dhori virus polymerase
Descriptor: GLYCEROL, POLYMERASE SUBUNIT PA
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-11-26
Release date:2014-02-05
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
4AUO
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BU of 4auo by Molmil
Crystal structure of MMP-1(E200A) in complex with a triple-helical collagen peptide
Descriptor: CALCIUM ION, INTERSTITIAL COLLAGENASE, TRIPLE-HELICAL COLLAGEN PEPTIDE, ...
Authors:Manka, S.W, Carafoli, F, Visse, R, Bihan, D, Raynal, N, Farndale, R.W, Murphy, G, Enghild, J.J, Hohenester, E, Nagase, H.
Deposit date:2012-05-18
Release date:2012-07-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights Into Triple-Helical Collagen Cleavage by Matrix Metalloproteinase 1
Proc.Natl.Acad.Sci.USA, 109, 2012
4AVQ
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Influenza strain pH1N1 2009 polymerase subunit PA endonuclease
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, POLYMERASE PA
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-05-29
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AWH
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BU of 4awh by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with rUMP
Descriptor: MANGANESE (II) ION, POLYMERASE PA, URIDINE-5'-MONOPHOSPHATE
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-06-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AVL
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BU of 4avl by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with dTMP
Descriptor: MANGANESE (II) ION, POLYMERASE PA, THYMIDINE-5'-PHOSPHATE
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H.J, Ruigrok, R.W.H, Cusack, S.
Deposit date:2012-05-28
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AVG
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BU of 4avg by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with diketo compound 2
Descriptor: (Z)-4-[4-[(4-chlorophenyl)methyl]-1-(cyclohexylmethyl)piperidin-4-yl]-2-oxidanyl-4-oxidanylidene-but-2-enoic acid, MANGANESE (II) ION, POLYMERASE PA
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-05-25
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
1SDU
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BU of 1sdu by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: ACETATE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, SULFATE ION, ...
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
1SDT
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BU of 1sdt by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, protease RETROPEPSIN
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
4A7T
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BU of 4a7t by Molmil
Structure of human I113T SOD1 mutant complexed with isoproteranol in the p21 space group
Descriptor: ACETATE ION, COPPER (II) ION, ISOPRENALINE, ...
Authors:Wright, G.S.A, Kershaw, N.M, Antonyuk, S.V, Strange, R.W, ONeil, P.M, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-11-28
Last modified:2013-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Ligand Binding and Aggregation of Pathogenic Sod1.
Nat.Commun., 4, 2013
4A7Q
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BU of 4a7q by Molmil
Structure of human I113T SOD1 mutant complexed with 4-(4-methyl-1,4- diazepan-1-yl)quinazoline in the p21 space group.
Descriptor: 4-(4-METHYL-1,4-DIAZEPAN-1-YL)QUINAZOLINE, COPPER (II) ION, SULFATE ION, ...
Authors:Wright, G.S.A, Kershaw, N.M, Antonyuk, S.V, Strange, R.W, ONeil, P.M, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-10-24
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:X-Ray Crystallography and Computational Docking for the Detection and Development of Protein-Ligand Interactions.
Curr.Med.Chem., 20, 2013
4B7U
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BU of 4b7u by Molmil
PLASMODIUM FALCIPARUM L-LACTATE DEHYDROGENASE COMPLEXED WITH BICINE
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, BICINE, ...
Authors:Birkinshaw, R.W, Brady, R.L.
Deposit date:2012-08-22
Release date:2012-10-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The Crystal Structure of Plasmodium Falciparum L- Lactate Dehydrogenase in Complex with a Novel Bicine Ligand
To be Published
4CO6
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BU of 4co6 by Molmil
Crystal structure of the Nipah virus RNA free nucleoprotein- phosphoprotein complex
Descriptor: BROMIDE ION, CHLORIDE ION, NUCLEOPROTEIN, ...
Authors:Yabukarksi, F, Lawrence, P, Tarbouriech, N, Bourhis, J.M, Jensen, M.R, Ruigrok, R.W.H, Blackledge, M, Volchkov, V, Jamin, M.
Deposit date:2014-01-27
Release date:2014-08-13
Last modified:2014-09-17
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Structure of Nipah Virus Unassembled Nucleoprotein in Complex with its Viral Chaperone.
Nat.Struct.Mol.Biol., 21, 2014
4A7S
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BU of 4a7s by Molmil
Structure of human I113T SOD1 mutant complexed with 5-Fluorouridine in the p21 space group
Descriptor: 5-FLUOROURIDINE, ACETATE ION, COPPER (II) ION, ...
Authors:Wright, G.S.A, Kershaw, N.M, Antonyuk, S.V, Strange, R.W, ONeil, P.M, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-12-05
Last modified:2013-05-08
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Ligand Binding and Aggregation of Pathogenic Sod1.
Nat.Commun., 4, 2013
1SP2
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BU of 1sp2 by Molmil
NMR STRUCTURE OF A ZINC FINGER DOMAIN FROM TRANSCRIPTION FACTOR SP1F2, MINIMIZED AVERAGE STRUCTURE
Descriptor: SP1F2, ZINC ION
Authors:Narayan, V.A, Kriwacki, R.W, Caradonna, J.P.
Deposit date:1996-11-21
Release date:1997-04-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of zinc finger domains from transcription factor Sp1. Insights into sequence-specific protein-DNA recognition.
J.Biol.Chem., 272, 1997
1SP1
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BU of 1sp1 by Molmil
NMR STRUCTURE OF A ZINC FINGER DOMAIN FROM TRANSCRIPTION FACTOR SP1F3, MINIMIZED AVERAGE STRUCTURE
Descriptor: SP1F3, ZINC ION
Authors:Narayan, V.A, Kriwacki, R.W, Caradonna, J.P.
Deposit date:1996-11-21
Release date:1997-04-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of zinc finger domains from transcription factor Sp1. Insights into sequence-specific protein-DNA recognition.
J.Biol.Chem., 272, 1997
4A7V
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BU of 4a7v by Molmil
Structure of human I113T SOD1 mutant complexed with dopamine in the p21 space group
Descriptor: COPPER (II) ION, L-DOPAMINE, SULFATE ION, ...
Authors:Wright, G.S.A, Antonyuk, S.V, Kershaw, N.M, Strange, R.W, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-11-28
Last modified:2013-05-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Ligand Binding and Aggregation of Pathogenic Sod1.
Nat.Commun., 4, 2013
1SDV
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BU of 1sdv by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, protease RETROPEPSIN
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
1PPO
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BU of 1ppo by Molmil
DETERMINATION OF THE STRUCTURE OF PAPAYA PROTEASE OMEGA
Descriptor: MERCURY (II) ION, PROTEASE OMEGA
Authors:Pickersgill, R.W, Rizkallah, P.J, Harris, G.W, Goodenough, P.W.
Deposit date:1991-07-12
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Determination of the Structure of Papaya Protease Omega
Acta Crystallogr.,Sect.B, 47, 1991
1PMR
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BU of 1pmr by Molmil
LIPOYL DOMAIN FROM THE DIHYDROLIPOYL SUCCINYLTRANSFERASE COMPONENT OF THE 2-OXOGLUTARATE DEHYDROGENASE MULTIENZYME COMPLEX OF ESCHERICHIA COLI, NMR, 25 STRUCTURES
Descriptor: DIHYDROLIPOYL SUCCINYLTRANSFERASE
Authors:Ricaud, P.M, Howard, M.J, Roberts, E.L, Broadhurst, R.W, Perham, R.N.
Deposit date:1997-07-24
Release date:1998-07-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional structure of the lipoyl domain from the dihydrolipoyl succinyltransferase component of the 2-oxoglutarate dehydrogenase multienzyme complex of Escherichia coli.
J.Mol.Biol., 264, 1996
1PPN
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BU of 1ppn by Molmil
STRUCTURE OF MONOCLINIC PAPAIN AT 1.60 ANGSTROMS RESOLUTION
Descriptor: METHANOL, PAPAIN, UNKNOWN LIGAND
Authors:Pickersgill, R.W, Harris, G.W, Garman, E.
Deposit date:1991-10-25
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Monoclinic Papain at 1.60 Angstroms Resolution
Acta Crystallogr.,Sect.B, 48, 1992

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