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PDB: 46226 results

2JI1
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BU of 2ji1 by Molmil
X-ray structure of wild-type superoxide reductase from Desulfoarculus baarsii
Descriptor: CALCIUM ION, Desulfoferrodoxin, FE (II) ION, ...
Authors:Katona, G, Carpentier, P, Niviere, V, Amara, P, Adam, V, Ohana, J, Tsanov, N, Bourgeois, D.
Deposit date:2007-02-24
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Raman-assisted crystallography reveals end-on peroxide intermediates in a nonheme iron enzyme.
Science, 316, 2007
379D
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BU of 379d by Molmil
THE STRUCTURAL BASIS OF HAMMERHEAD RIBOZYME SELF-CLEAVAGE
Descriptor: COBALT (II) ION, RNA (5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP*A P*GP*UP*CP*AP*CP*CP*AP*C)-3'), RNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3')
Authors:Murray, J.B, Terwey, D.P, Maloney, L, Karpeisky, A, Usman, N, Beigelman, L, Scott, W.G.
Deposit date:1998-02-05
Release date:1998-02-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structural basis of hammerhead ribozyme self-cleavage.
Cell(Cambridge,Mass.), 92, 1998
8K4Y
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BU of 8k4y by Molmil
Structure of a triple-helix region of human ReCol 3 from Trautec
Descriptor: SULFATE ION, triple-helix region of human ReCol 3
Authors:Chu, Y, Zhai, Y, Fan, X, Li, J, Wang, L, Fu, S, Feng, P, Qian, S.
Deposit date:2023-07-20
Release date:2023-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a triple-helix region of human ReCol 3 from Trautec.
To Be Published
8K4X
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BU of 8k4x by Molmil
Structure of a triple-helix region of human Collagen type XVII from Trautec
Descriptor: triple-helix region of human Collagen type XVII
Authors:Chu, Y, Zhai, Y, Fan, X, Li, J, Wang, L, Fu, S, Feng, P, Qian, S.
Deposit date:2023-07-20
Release date:2023-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a triple-helix region of human Collagen type XVII from Trautec.
To Be Published
7Q5C
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BU of 7q5c by Molmil
Crystal structure of OmpG in space group 96
Descriptor: Outer membrane porin G, SODIUM ION, TETRAETHYLENE GLYCOL, ...
Authors:Nguyen, T.T.M, Khan, A.R, Barringer, R, McManus, J.J, Race, P.R.
Deposit date:2021-11-03
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.717 Å)
Cite:Experimental phase diagrams to optimise OmpG
To Be Published
2NQX
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BU of 2nqx by Molmil
Crystal Structure of bovine lactoperoxidase with iodide ions at 2.9A resolution
Descriptor: 1-(OXIDOSULFANYL)METHANAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Singh, A.K, Kaur, P, Singh, N, Bhushan, A, Sharma, S, Singh, T.P.
Deposit date:2006-11-01
Release date:2006-11-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure of bovine lactoperoxidase with iodide ions at 2.9A resolution
To be Published
6WPB
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BU of 6wpb by Molmil
NMR Structure of HSP1-NH2 antimicrobial peptide in presence of SDS-d25 micelles
Descriptor: HSP1-NH2
Authors:Verly, R.M, Gomes, I.P.
Deposit date:2020-04-27
Release date:2020-09-02
Last modified:2020-09-16
Method:SOLUTION NMR
Cite:Membrane interactions of the anuran antimicrobial peptide HSP1-NH2: Different aspects of the association to anionic and zwitterionic biomimetic systems.
Biochim Biophys Acta Biomembr, 1863, 2020
2JMG
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BU of 2jmg by Molmil
Solution structure of V7R mutant of HIV-1 myristoylated matrix protein
Descriptor: Gag polyprotein, MYRISTIC ACID
Authors:Saad, J.S, Loeliger, E, Luncsford, P, Liriano, M, Tai, J, Kim, A, Miller, J, Joshi, A, Freed, E.O, Summers, M.F.
Deposit date:2006-11-11
Release date:2007-02-06
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Point mutations in the HIV-1 matrix protein turn off the myristyl switch.
J.Mol.Biol., 366, 2007
2JI2
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BU of 2ji2 by Molmil
X-ray structure of E114A mutant of superoxide reductase from Desulfoarculus baarsii in the native, reduced form
Descriptor: CALCIUM ION, Desulfoferrodoxin, FE (II) ION, ...
Authors:Katona, G, Carpentier, P, Niviere, V, Amara, P, Adam, V, Ohana, J, Tsanov, N, Bourgeois, D.
Deposit date:2007-02-24
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Raman-assisted crystallography reveals end-on peroxide intermediates in a nonheme iron enzyme.
Science, 316, 2007
2UWE
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BU of 2uwe by Molmil
Large CDR3a loop alteration as a function of MHC mutation
Descriptor: AHIII TCR ALPHA CHAIN, AHIII TCR BETA CHAIN, BETA-2-MICROGLOBULIN, ...
Authors:Miller, P.J, Pazy, Y, Conti, B, Riddle, D, Biddison, W.E, Appella, E, Collins, E.J.
Deposit date:2007-03-20
Release date:2007-09-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Single Mhc Mutation Eliminates Enthalpy Associated with T Cell Receptor Binding.
J.Mol.Biol., 373, 2007
4HUR
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BU of 4hur by Molmil
Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with acetyl coenzyme A
Descriptor: 1,2-ETHANEDIOL, ACETYL COENZYME *A, CHLORIDE ION, ...
Authors:Stogios, P.J, Minasov, G, Evdokimova, E, Wawrzak, Z, Yim, V, Krishnamoorthy, M, Di Leo, R, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-11-03
Release date:2012-11-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Potential for Reduction of Streptogramin A Resistance Revealed by Structural Analysis of Acetyltransferase VatA.
Antimicrob.Agents Chemother., 58, 2014
6WPD
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BU of 6wpd by Molmil
NMR Structure of HSP1-NH2 antimicrobial peptide in presence of DPC-d38 micelles
Descriptor: HSP1-NH2
Authors:Verly, R.M, Gomes, I.P.
Deposit date:2020-04-27
Release date:2020-09-02
Last modified:2020-09-16
Method:SOLUTION NMR
Cite:Membrane interactions of the anuran antimicrobial peptide HSP1-NH2: Different aspects of the association to anionic and zwitterionic biomimetic systems.
Biochim Biophys Acta Biomembr, 1863, 2020
2JLQ
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BU of 2jlq by Molmil
Dengue virus 4 NS3 helicase structure, apo enzyme.
Descriptor: CHLORIDE ION, GLYCEROL, SERINE PROTEASE SUBUNIT NS3
Authors:Luo, D.H, Xu, T, Watson, R.P, Becker, D.S, Sampath, A, Jahnke, W, Yeong, S.S, Wang, C.H, Lim, S.P, Vasudevan, S.G, Lescar, J.
Deposit date:2008-09-15
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Insights Into RNA Unwinding and ATP Hydrolysis by the Flavivirus Ns3 Protein.
Embo J., 27, 2008
6PTT
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BU of 6ptt by Molmil
Soluble model of Arabidopsis thaliana CuA (Tt3LAt)
Descriptor: Cytochrome c oxidase subunit 2, DINUCLEAR COPPER ION
Authors:Lisa, M.N, Giannini, E, Llases, M.E, Alzari, P.M, Vila, A.J.
Deposit date:2019-07-16
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Unexpected electron spin density on the axial methionine ligand in CuAsuggests its involvement in electron pathways.
Chem.Commun.(Camb.), 56, 2020
1L3L
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BU of 1l3l by Molmil
Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA
Descriptor: 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE, 5'-D(*GP*AP*TP*GP*TP*GP*CP*AP*GP*AP*TP*CP*TP*GP*CP*AP*CP*AP*TP*C)-3', Transcriptional activator protein traR
Authors:Zhang, R, Pappas, T, Brace, J.L, Miller, P.C, Oulmassov, T, Molyneaux, J.M, Anderson, J.C, Bashkin, J.K, Winans, S.C, Joachimiak, A.
Deposit date:2002-02-27
Release date:2002-07-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA.
Nature, 417, 2002
4EPI
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BU of 4epi by Molmil
The crystal structure of pesticin-T4 lysozyme hybrid stabilized by engineered disulfide bonds
Descriptor: Pesticin, Lysozyme Chimera, SODIUM ION, ...
Authors:Seddiki, N, Fairman, J.W, Noinaj, N, Lukacik, P, Barnard, T, Buchanan, S.K.
Deposit date:2012-04-17
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural engineering of a phage lysin that targets Gram-negative pathogens.
Proc.Natl.Acad.Sci.USA, 109, 2012
7F03
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BU of 7f03 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with ANP
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
7F04
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BU of 7f04 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with Heme and ATP.
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, ADENOSINE-5'-TRIPHOSPHATE, Cytochrome c biogenesis ATP-binding export protein CcmA, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
2EA0
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BU of 2ea0 by Molmil
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli in complex with AP-site containing DNA substrate
Descriptor: 5'-D(P*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3', 5'-D(P*GP*GP*CP*TP*TP*CP*AP*TP*CP*CP*TP*G)-3', Endonuclease VIII, ...
Authors:Golan, G, Zharov, D.O, Grollman, A.P, Shoham, G.
Deposit date:2007-01-29
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Active site plasticity of endonuclease VIII: Conformational changes compensating for different substrate and mutations of critical residues
To be Published
6A3W
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BU of 6a3w by Molmil
Complex structure of 4-1BB and utomilumab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor receptor superfamily member 9, utomilumab VH, ...
Authors:Li, Y, Tan, S, Zhang, C, Chai, Y, Qi, J, Tien, P, Gao, S, Gao, G.F.
Deposit date:2018-06-17
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Limited Cross-Linking of 4-1BB by 4-1BB Ligand and the Agonist Monoclonal Antibody Utomilumab.
Cell Rep, 25, 2018
4IXZ
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BU of 4ixz by Molmil
Native structure of cystathionine gamma lyase (XometC) from xanthomonas oryzae pv. oryzae at pH 9.0
Descriptor: BETA-MERCAPTOETHANOL, BICARBONATE ION, Cystathionine gamma-lyase-like protein, ...
Authors:Ngo, H.P.T, Kim, J.K, Kang, L.W.
Deposit date:2013-01-28
Release date:2014-01-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:PLP undergoes conformational changes during the course of an enzymatic reaction.
Acta Crystallogr.,Sect.D, 70, 2014
1G2J
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BU of 1g2j by Molmil
RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE
Descriptor: 5'-R(*CP*CP*CP*(PYY)P*GP*GP*GP*G)-3', CALCIUM ION
Authors:Minasov, G, Matulic-Adamic, J, Wilds, C.J, Haeberli, P, Usman, N, Beigelman, L, Egli, M.
Deposit date:2000-10-20
Release date:2000-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of an RNA duplex containing phenyl-ribonucleotides, hydrophobic isosteres of the natural pyrimidines.
RNA, 6, 2000
3FCO
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BU of 3fco by Molmil
Crystal Structure of 11beta-Hydroxysteroid Dehydrogenase 1 (11b-HSD1) in Complex with Benzamide Inhibitor
Descriptor: Corticosteroid 11-beta-dehydrogenase isozyme 1, N-cyclopropyl-N-(cis-4-cyclopropyl-4-hydroxycyclohexyl)-4-[(1S)-2,2,2-trifluoro-1-hydroxy-1-methylethyl]benzamide, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wang, Z, Sudom, A, Walker, N.P.
Deposit date:2008-11-21
Release date:2009-12-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Optimization of novel di-substituted cyclohexylbenzamide derivatives as potent 11 beta-HSD1 inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
8OFS
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BU of 8ofs by Molmil
Human adenovirus type 30 fiber-knob protein complexed with sialic acid
Descriptor: Fiber, N-acetyl-beta-neuraminic acid
Authors:Rizkallah, P.J, Parker, A.L, Mundy, R.M, Baker, A.T.
Deposit date:2023-03-16
Release date:2023-09-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus.
Npj Viruses, 1, 2023
2WXJ
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BU of 2wxj by Molmil
The crystal structure of the murine class IA PI 3-kinase p110delta in complex with INK654.
Descriptor: N-[6-(4-amino-1-{[2-(4-methylpiperazin-1-yl)quinolin-3-yl]methyl}-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-1,3-benzothiazol-2-yl]acetamide, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT DELTA ISOFORM
Authors:Berndt, A, Miller, S, Williams, O, Lee, D.D, Houseman, B.T, Pacold, J.I, Gorrec, F, Hon, W.-C, Liu, Y, Rommel, C, Gaillard, P, Ruckle, T, Schwarz, M.K, Shokat, K.M, Shaw, J.P, Williams, R.L.
Deposit date:2009-11-09
Release date:2010-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The P110D Structure: Mechanisms for Selectivity and Potency of New Pi(3)K Inhibitors
Nat.Chem.Biol., 6, 2010

225399

數據於2024-09-25公開中

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