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PDB: 46226 件

6M5N
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Apo-Form Structure of Borneol Dehydrogenase
分子名称: ACETATE ION, Borneol dehydrogenase, SULFATE ION
著者Khine, A.A, Huang, K.F, Ko, T.P, Chen, H.P.
登録日2020-03-11
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural characterization of borneol dehydrogenase from Pseudomonas sp. TCU-HL1
Acta Crystallogr.,Sect.F, 76, 2020
4U98
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Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway (AppCp complex)
分子名称: MAGNESIUM ION, Maltokinase, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Fraga, J, Empadinhas, N, Pereira, P.J.B, Macedo-Ribeiro, S.
登録日2014-08-05
公開日2015-02-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway.
Sci Rep, 5, 2015
4LSV
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Crystal structure of broadly and potently neutralizing antibody 3BNC117 in complex with HIV-1 clade C C1086 gp120
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEAVY CHAIN OF ANTIBODY 3BNC117, IMIDAZOLE, ...
著者Zhou, T, Moquin, S, Kwong, P.D.
登録日2013-07-23
公開日2013-08-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
1V4K
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Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima S77F mutant
分子名称: SULFATE ION, octoprenyl-diphosphate synthase
著者Guo, R.T, Kuo, C.J, Chou, C.C, Ko, T.P, Shr, H.L, Liang, P.H, Wang, A.H.-J.
登録日2003-11-14
公開日2004-03-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima and Mechanism of Product Chain Length Determination
J.Biol.Chem., 279, 2004
4IBG
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Ebola virus VP35 bound to small molecule
分子名称: GLYCEROL, PHOSPHATE ION, Polymerase cofactor VP35, ...
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
7D4J
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ddATP complex of cyclic trinucleotide synthase CdnD
分子名称: 2',3'-dideoxyadenosine triphosphate, Cyclic AMP-AMP-GMP synthase, MAGNESIUM ION
著者Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
登録日2020-09-24
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
1G09
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CARBONMONOXY LIGANDED BOVINE HEMOGLOBIN PH 7.2
分子名称: CARBON MONOXIDE, HEMOGLOBIN ALPHA CHAIN, HEMOGLOBIN BETA CHAIN, ...
著者Mueser, T.C, Rogers, P.H, Arnone, A.
登録日2000-10-05
公開日2000-12-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Interface sliding as illustrated by the multiple quaternary structures of liganded hemoglobin.
Biochemistry, 39, 2000
5L6E
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Crystal structure of the human METTL3-METTL14 complex bound to SAM
分子名称: ACETATE ION, MAGNESIUM ION, N6-adenosine-methyltransferase 70 kDa subunit, ...
著者Sledz, P, Jinek, M.
登録日2016-05-29
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structural insights into the molecular mechanism of the m(6)A writer complex.
Elife, 5, 2016
7D48
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apo-form cyclic trinucleotide synthase CdnD
分子名称: Cyclic AMP-AMP-GMP synthase, SODIUM ION
著者Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
登録日2020-09-23
公開日2021-03-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
6MB9
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Ternary (neomycin/CoA) structure of AAC-IIIb
分子名称: Aac(3)-IIIb protein, COENZYME A, NEOMYCIN, ...
著者Cuneo, M.J, Kumar, P.
登録日2018-08-29
公開日2018-11-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
4ZN8
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Using molecular dynamics simulations to predict domain swapping of computationally designed protein variants
分子名称: POTASSIUM ION, computationally modified engrailed homeodomain
著者Huang, P.-S, Thomas, L.M, Mayo, S.L.
登録日2015-05-04
公開日2015-05-27
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants.
J.Mol.Biol., 427, 2015
5O1O
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Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain with proline bound.
分子名称: 1,2-ETHANEDIOL, Alpha-aminoadipic semialdehyde synthase, mitochondrial, ...
著者Kopec, J, Rembeza, E, Pena, I.A, Mathea, S, Velupillai, S, Strain-Damerell, C, Goubin, S, Kupinska, K, Talon, R, Collins, P, Krojer, T, Burgess-Brown, N, Arrowsmith, C, Edwards, A, Bountra, C, von Delft, F, Arruda, P, Yue, W.W.
登録日2017-05-18
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain with proline bound.
To Be Published
5O2G
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Crystal structure determination from picosecond infrared laser ablated protein crystals by serial synchrotron crystallography
分子名称: Fluoroacetate dehalogenase
著者Schulz, E.C, Kaub, J, Busse, F, Mehrabi, P, Mueller-Werkmeiser, H, Pai, E.F, Robertson, W.D, Miller, R.J.D.
登録日2017-05-20
公開日2018-05-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure determination from picosecond infrared laser ablated protein crystals by serial synchrotron crystallography
To Be Published
6MC2
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Crystal structure of a tetrameric DNA fold-back quadruplex
分子名称: DNA (5'-D(*CP*GP*TP*AP*AP*GP*GP*CP*G)-3'), MAGNESIUM ION
著者Chu, B, Paukstelis, P.J.
登録日2018-08-30
公開日2018-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Crystal Structure of a Tetrameric DNA Fold-Back Quadruplex.
J. Am. Chem. Soc., 140, 2018
7EBI
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Chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitotetraose.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2021-03-09
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
5VF2
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scFv 2D10 re-refined as a complex with trehalose replacing the original alpha-1,6-mannobiose
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, UNKNOWN ATOM OR ION, ...
著者Porebski, P.J, Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
登録日2017-04-06
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
2HJM
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BU of 2hjm by Molmil
Crystal structure of a singleton protein PF1176 from P. furiosus
分子名称: Hypothetical protein PF1176
著者Chen, L.Q, Liu, Z.-J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2006-06-30
公開日2007-07-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a singleton protein PF1176 from P. furiosus
To be Published
1GAJ
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BU of 1gaj by Molmil
CRYSTAL STRUCTURE OF A NUCLEOTIDE-FREE ATP-BINDING CASSETTE FROM AN ABC TRANSPORTER
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, HIGH-AFFINITY BRANCHED CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN, ...
著者Karpowich, N, Yuan, Y.-R, Dai, P.L, Martsinkevich, O, Millen, L, Thomas, P.J, Hunt, J.F.
登録日2000-11-30
公開日2001-07-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the MJ1267 ATP binding cassette reveal an induced-fit effect at the ATPase active site of an ABC transporter.
Structure, 9, 2001
2VJA
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Torpedo Californica Acetylcholinesterase In Complex With A Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N- Trimethylpentanaminium - Orthorhombic space group - Dataset A at 100K
分子名称: (4R)-4-HYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
著者Colletier, J.P, Bourgeois, D, Fournier, D, Silman, I, Sussman, J.L, Weik, M.
登録日2007-12-09
公開日2008-07-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Shoot-and-Trap: Use of Specific X-Ray Damage to Study Structural Protein Dynamics by Temperature-Controlled Cryo-Crystallography.
Proc.Natl.Acad.Sci.USA, 105, 2008
4I3F
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Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
著者Stogios, P.J, Xu, X, Dong, A, Cui, H, Alcaide, M, Tornes, J, Gertler, C, Yakimov, M.M, Golyshin, P.N, Ferrer, M, Savchenko, A.
登録日2012-11-26
公開日2013-06-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the alpha / beta hydrolase family.
Biochem.J., 454, 2013
2VL4
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Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
分子名称: (2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
著者Tailford, L.E, Offen, W.A, Smith, N.L, Dumon, C, Moreland, C, Gratien, J, Heck, M.P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
登録日2008-01-08
公開日2008-04-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
7MXB
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Crystal structure of the S/T protein kinase PknG from Corynebacterium glutamicum in complex with AMP-PNP
分子名称: MAGNESIUM ION, MAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE, Serine/threonine protein kinases
著者Lisa, M.N, Alzari, P.M.
登録日2021-05-18
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Tetratricopeptide Repeat Scaffold Couples Signal Detection to OdhI Phosphorylation in Metabolic Control by the Protein Kinase PknG.
Mbio, 12, 2021
7MXJ
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Crystal structure of the S/T protein kinase PknG from Corynebacterium glutamicum (residues 130-433) in complex with AMP-PNP, isoform 1
分子名称: MAGNESIUM ION, MAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE, Serine/threonine protein kinases
著者Lisa, M.N, Alzari, P.M.
登録日2021-05-19
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献A Tetratricopeptide Repeat Scaffold Couples Signal Detection to OdhI Phosphorylation in Metabolic Control by the Protein Kinase PknG.
Mbio, 12, 2021
4OLJ
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Crystal structure of Arg119Gln mutant of Peptidyl-tRNA Hydrolase from Acinetobacter Baumannii at 1.49 A resolution
分子名称: GLYCEROL, L(+)-TARTARIC ACID, Peptidyl-tRNA hydrolase
著者Sikarwar, J, Dube, D, Kaushik, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2014-01-24
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Crystal structure of Arg119Gln mutant of Peptidyl-tRNA hydrolase from Acinetobacter Baumannii at 1.49 A resolution
to be published
2HKF
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Crystal structure of the Complex Fab M75- Peptide
分子名称: Carbonic anhydrase 9, Immunoglobulin Heavy chain Fab fragment, Immunoglobulin Light chain Fab fragment
著者Kral, V, Mader, P, Stouracova, R, Fabry, M, Horejsi, M, Brynda, J.
登録日2006-07-04
公開日2007-11-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Stabilization of antibody structure upon association to a human carbonic anhydrase IX epitope studied by X-ray crystallography, microcalorimetry, and molecular dynamics simulations.
Proteins, 71, 2008

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