Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 46226 件

4N7K
DownloadVisualize
BU of 4n7k by Molmil
Zinc Substituted Reaction Center of the Rhodobacter sphaeroides
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CARDIOLIPIN, FE (III) ION, ...
著者Hardjasa, A, Murphy, M.E.P.
登録日2013-10-15
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural and kinetic properties of Rhodobacter sphaeroides photosynthetic reaction centers containing exclusively Zn-coordinated bacteriochlorophyll as bacteriochlorin cofactors.
Biochim.Biophys.Acta, 1837, 2013
2AIB
DownloadVisualize
BU of 2aib by Molmil
beta-cinnamomin in complex with ergosterol
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-elicitin cinnamomin, ERGOSTEROL, ...
著者Rodrigues, M.L, Archer, M, Martel, P, Miranda, S, Thomaz, M, Enguita, F.J, Baptista, R.P, Melo, E.P, Sousa, N, Cravador, A, Carrondo, M.A.
登録日2005-07-29
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structures of the free and sterol-bound forms of beta-cinnamomin
Biochim.Biophys.Acta, 1764, 2006
3E8E
DownloadVisualize
BU of 3e8e by Molmil
Crystal structures of the kinase domain of PKA in complex with ATP-competitive inhibitors
分子名称: 4-[2-(4-amino-2,5-dihydro-1,2,5-oxadiazol-3-yl)-6-{[(1S)-3-amino-1-phenylpropyl]oxy}-1-ethyl-1H-imidazo[4,5-c]pyridin-4-yl]-2-methylbut-3-yn-2-ol, PKI inhibitor peptide, cAMP-dependent protein kinase catalytic subunit alpha
著者Concha, N.O, Elkins, P.A, Smallwood, A, Ward, P.
登録日2008-08-19
公開日2008-11-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Aminofurazans as potent inhibitors of AKT kinase
Bioorg.Med.Chem.Lett., 19, 2009
2KUZ
DownloadVisualize
BU of 2kuz by Molmil
2-Aminopurine incorporation perturbs the dynamics and structure of DNA
分子名称: DNA (5'-D(*CP*GP*AP*CP*GP*TP*TP*TP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*AP*AP*AP*CP*GP*TP*CP*G)-3')
著者Dallmann, A, Dehmel, L, Peters, T, Muegge, C, Griesinger, C.P, Tuma, J, Ernsting, N.P.
登録日2010-03-03
公開日2010-07-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献2-aminopurine incorporation perturbs the dynamics and structure of DNA.
Angew.Chem.Int.Ed.Engl., 49, 2010
1RNC
DownloadVisualize
BU of 1rnc by Molmil
NEWLY OBSERVED BINDING MODE IN PANCREATIC RIBONUCLEASE
分子名称: GUANOSINE-5'-MONOPHOSPHATE, RIBONUCLEASE A, SULFATE ION
著者Aguilar, C.F, Thomas, P.J, Mills, A, Moss, D.S, Palmer, R.A.
登録日1991-10-21
公開日1994-01-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Newly observed binding mode in pancreatic ribonuclease.
J.Mol.Biol., 224, 1992
2KDL
DownloadVisualize
BU of 2kdl by Molmil
NMR structures of GA95 and GB95, two designed proteins with 95% sequence identity but different folds and functions
分子名称: designed protein
著者He, Y, Alexander, P, Chen, Y, Bryan, P, Orban, J.
登録日2009-01-12
公開日2009-12-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A minimal sequence code for switching protein structure and function.
Proc.Natl.Acad.Sci.USA, 106, 2009
4EXM
DownloadVisualize
BU of 4exm by Molmil
The crystal structure of an engineered phage lysin containing the binding domain of pesticin and the killing domain of T4-lysozyme
分子名称: Pesticin, Lysozyme Chimera
著者Seddiki, N, Noinaj, N, Fairman, J.W, Lukacik, P, Barnard, T.J, Buchanan, S.K.
登録日2012-04-30
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural engineering of a phage lysin that targets Gram-negative pathogens.
Proc.Natl.Acad.Sci.USA, 109, 2012
4OE1
DownloadVisualize
BU of 4oe1 by Molmil
Crystal structure of the pentatricopeptide repeat protein PPR10 (C256S/C430S/C449S) in complex with an 18-nt PSAJ rna element
分子名称: Chloroplast pentatricopeptide repeat protein 10, PHOSPHATE ION, psaJ RNA
著者Li, Q, Yan, C, Wu, J, Yin, P, Yan, N.
登録日2014-01-11
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Examination of the dimerization states of the single-stranded RNA recognition protein pentatricopeptide repeat 10 (PPR10).
J.Biol.Chem., 289, 2014
1V4E
DownloadVisualize
BU of 1v4e by Molmil
Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima
分子名称: SULFATE ION, octoprenyl-diphosphate synthase
著者Guo, R.T, Kuo, C.J, Chou, C.C, Ko, T.P, Shr, H.L, Liang, P.H, Wang, A.H.-J.
登録日2003-11-13
公開日2004-03-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima and Mechanism of Product Chain Length Determination
J.Biol.Chem., 279, 2004
2KYD
DownloadVisualize
BU of 2kyd by Molmil
RDC and RCSA refinement of an A-form RNA: Improvements in Major Groove Width
分子名称: RNA (5'-R(*CP*UP*AP*GP*UP*UP*AP*GP*CP*UP*AP*AP*CP*UP*AP*G)-3')
著者Tolbert, B.S, Summers, M.F, Miyazaki, Y, Barton, S, Kinde, B, Stark, P, Singh, R, Bax, A, Case, D.
登録日2010-05-24
公開日2010-07-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Major groove width variations in RNA structures determined by NMR and impact of 13C residual chemical shift anisotropy and 1H-13C residual dipolar coupling on refinement.
J.Biomol.Nmr, 47, 2010
3EMC
DownloadVisualize
BU of 3emc by Molmil
Crystal structure of XynB, an intracellular xylanase from Paenibacillus barcinonensis
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Endo-1,4-beta-xylanase
著者Sanz-Aparicio, J, Isorna, P, Gonzalez, B.
登録日2008-09-24
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the specificity of Xyn10B from Paenibacillus barcinonensis and its improved stability by forced protein evolution.
J.Biol.Chem., 285, 2010
2QB5
DownloadVisualize
BU of 2qb5 by Molmil
Crystal Structure of Human Inositol 1,3,4-Trisphosphate 5/6-Kinase (ITPK1) in Complex with ADP and Mn2+
分子名称: ADENOSINE-5'-DIPHOSPHATE, Inositol-tetrakisphosphate 1-kinase, MANGANESE (II) ION, ...
著者Chamberlain, P.P, Lesley, S.A, Spraggon, G.
登録日2007-06-15
公開日2007-07-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Integration of inositol phosphate signaling pathways via human ITPK1.
J.Biol.Chem., 282, 2007
1N0X
DownloadVisualize
BU of 1n0x by Molmil
Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, B2.1 peptide, GLYCEROL, ...
著者Saphire, E.O, Montero, M, Menendez, A, Irving, M.B, Zwick, M.B, Parren, P.W.H.I, Burton, D.R, Scott, J.K, Wilson, I.A.
登録日2002-10-15
公開日2004-04-13
最終更新日2017-06-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
To be Published
1RQH
DownloadVisualize
BU of 1rqh by Molmil
Propionibacterium shermanii transcarboxylase 5S subunit bound to pyruvic acid
分子名称: COBALT (II) ION, PYRUVIC ACID, transcarboxylase 5S subunit
著者Hall, P.R, Zheng, R, Antony, L, Pusztai-Carey, M, Carey, P.R, Yee, V.C.
登録日2003-12-05
公開日2004-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit.
Embo J., 23, 2004
3H8N
DownloadVisualize
BU of 3h8n by Molmil
Crystal Structure Analysis of KIR2DS4
分子名称: Killer cell immunoglobulin-like receptor 2DS4
著者Graef, T, Bushnell, D.A, Parham, P.
登録日2009-04-29
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献KIR2DS4 is a product of gene conversion with KIR3DL2 that introduced specificity for HLA-A*11 while diminishing avidity for HLA-C.
J.Exp.Med., 206, 2009
1N5M
DownloadVisualize
BU of 1n5m by Molmil
Crystal structure of the mouse acetylcholinesterase-gallamine complex
分子名称: 2,2',2"-[1,2,3-BENZENE-TRIYLTRIS(OXY)]TRIS[N,N,N-TRIETHYLETHANAMINIUM], 2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, ...
著者Bourne, Y, Taylor, P, Radic, Z, Marchot, P.
登録日2002-11-06
公開日2003-02-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into ligand interactions at the acetylcholinesterase peripheral anionic site
EMBO J., 22, 2003
4OM0
DownloadVisualize
BU of 4om0 by Molmil
Crystal structure of antibody VRC07-G54Y in complex with clade A/E 93TH057 HIV-1 gp120 core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2014-01-25
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.289 Å)
主引用文献Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014
1MX1
DownloadVisualize
BU of 1mx1 by Molmil
Crystal Structure of Human Liver Carboxylesterase in complex with tacrine
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid, ...
著者Bencharit, S, Morton, C.L, Hyatt, J.L, Kuhn, P, Danks, M.K, Potter, P.M, Redinbo, M.R.
登録日2002-10-01
公開日2003-04-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Human Carboxylesterase 1 Complexed with the Alzheimer's Drug Tacrine: From Binding Promiscuity to Selective Inhibition
CHEM.BIOL., 10, 2003
1N5Z
DownloadVisualize
BU of 1n5z by Molmil
Complex structure of Pex13p SH3 domain with a peptide of Pex14p
分子名称: 14-mer peptide from Peroxisomal membrane protein PEX14, Peroxisomal membrane protein PAS20
著者Douangamath, A, Filipp, F.V, Klein, A.T.J, Barnett, P, Zou, P, Voorn-Brouwer, T, Vega, M.C, Mayans, O.M, Sattler, M, Distel, B, Wilmanns, M.
登録日2002-11-08
公開日2002-12-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Topography for Independent Binding of alpha-Helical and PPII-Helical Ligands to a Peroxisomal SH3 Domain
MOL.CELL, 10, 2002
3CWH
DownloadVisualize
BU of 3cwh by Molmil
D-xylose Isomerase in complex with linear product, per-deuterated xylulose
分子名称: D-XYLULOSE, HYDROXIDE ION, MAGNESIUM ION, ...
著者Kovalevsky, A.Y, Langan, P, Glusker, J.P.
登録日2008-04-21
公開日2008-08-05
最終更新日2023-08-30
実験手法NEUTRON DIFFRACTION (2.2 Å)
主引用文献Hydrogen location in stages of an enzyme-catalyzed reaction: time-of-flight neutron structure of D-xylose isomerase with bound D-xylulose
Biochemistry, 47, 2008
1N1N
DownloadVisualize
BU of 1n1n by Molmil
Structure of Mispairing of the Deoxycytosine with Deoxyadenosine 5' to the 8,9-Dihydro-8-(N7-guanyl)-9-Hydroxy-Aflatoxin B1 Adduct
分子名称: 5'-D(*AP*CP*AP*TP*CP*GP*AP*TP*CP*T)-3', 5'-D(*AP*GP*AP*TP*CP*AP*AP*TP*GP*T)-3', 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1
著者Stone, M.P, Giri, I.
登録日2002-10-18
公開日2003-10-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Wobble dC.dA pairing 5' to the cationic guanine N7 8,9-dihydro-8-(N7-guanyl)-9-hydroxyaflatoxin B1 adduct: implications for nontargeted AFB1 mutagenesis.
Biochemistry, 42, 2003
3HC6
DownloadVisualize
BU of 3hc6 by Molmil
FXR with SRC1 and GSK088
分子名称: 3-[(5-{[3-(2,6-dichlorophenyl)-5-(1-methylethyl)isoxazol-4-yl]methoxy}-1H-indol-1-yl)methyl]benzoic acid, Bile acid receptor, Nuclear receptor coactivator 1, ...
著者Williams, S.P, Madauss, K.P.
登録日2009-05-05
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献FXR agonist activity of conformationally constrained analogs of GW 4064.
Bioorg.Med.Chem.Lett., 19, 2009
3QI2
DownloadVisualize
BU of 3qi2 by Molmil
A Galpha P-loop mutation prevents transition to the activated state: G42R bound to RGS14 GoLoco
分子名称: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者Bosch, D.E, Willard, F.S, Kimple, A.J, Miley, M.J, Siderovski, D.P.
登録日2011-01-26
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.797 Å)
主引用文献A P-loop Mutation in Galpha Subunits Prevents Transition to the Active State: Implications for G-protein Signaling in Fungal Pathogenesis
Plos Pathog., 8, 2012
3GRS
DownloadVisualize
BU of 3grs by Molmil
REFINED STRUCTURE OF GLUTATHIONE REDUCTASE AT 1.54 ANGSTROMS RESOLUTION
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE REDUCTASE, PHOSPHATE ION
著者Schulz, G.E, Karplus, P.A.
登録日1988-02-05
公開日1988-04-16
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Refined structure of glutathione reductase at 1.54 A resolution.
J.Mol.Biol., 195, 1987
3QE2
DownloadVisualize
BU of 3qe2 by Molmil
Crystal Structure of Human NADPH-Cytochrome P450 Reductase
分子名称: CALCIUM ION, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Xia, C, Marohnic, C, Panda, S.P, Masters, B.S, Kim, J.-J.P.
登録日2011-01-19
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for human NADPH-cytochrome P450 oxidoreductase deficiency.
Proc.Natl.Acad.Sci.USA, 108, 2011

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon