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PDB: 46226 件

2F43
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Rat liver F1-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase alpha chain, ...
著者Chen, C, Saxena, A.K, Simcoke, W.N, Garboczi, D.N, Pedersen, P.L, Ko, Y.H.
登録日2005-11-22
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mitochondrial ATP synthase: Crystal structure of the catalytic F1 unit in a vanadate-induced transition-like state and implications for mechanism.
J.Biol.Chem., 281, 2006
2FCZ
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HIV-1 DIS kissing-loop in complex with ribostamycin
分子名称: HIV-1 DIS RNA, POTASSIUM ION, RIBOSTAMYCIN
著者Ennifar, E, Paillart, J.C, Marquet, R, Dumas, P.
登録日2005-12-13
公開日2006-05-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006
6JAR
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Crystal structure of ABC transporter alpha-glycoside-binding mutant protein R49A in complex with maltose
分子名称: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ...
著者Kanaujia, S.P, Chandravanshi, M, Gogoi, P.
登録日2019-01-24
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Febs J., 287, 2020
1TLB
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Yeast coproporphyrinogen oxidase
分子名称: Coproporphyrinogen III oxidase, SULFATE ION
著者Phillip, J.D, Whitby, F.G, Warby, C.A, Labbe, P, Yang, C, Pflugrath, J.W, Ferrara, J.D, Robinson, H, Kushner, J.P, Hill, C.P.
登録日2004-06-09
公開日2004-07-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the oxygen-dependent coproporphyrinogen oxidase (Hem13p) of Saccharomyces cerevisiae
J.Biol.Chem., 279, 2004
1MW2
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Amylosucrase soaked with 100mM sucrose
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, amylosucrase, ...
著者Skov, L.K, Mirza, O, Sprogoe, D, Dar, I, Remaud-Simeon, M, Albenne, C, Monsan, P, Gajhede, M.
登録日2002-09-27
公開日2002-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Oligosaccharide and Sucrose Complexes of Amylosucrase. STRUCTURAL IMPLICATIONS FOR THE POLYMERASE ACTIVITY
J.BIOL.CHEM., 277, 2002
5WA4
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Pyridine synthase, TbtD, from thiomuracin biosynthesis bound to an N-terminal leader peptide fragment
分子名称: Pyridine synthase TbtD, TbtA 16-mer peptide
著者Cogan, D.P, Nair, S.K.
登録日2017-06-24
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.646 Å)
主引用文献Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4OAK
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Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Alanine-D-Alanine and copper (II)
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, COPPER (II) ION, ...
著者Stogios, P.J, Evdokimova, E, Meziane-Cherif, D, Di Leo, R, Yim, V, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-01-04
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the evolution of vancomycin resistance D,D-peptidases.
Proc.Natl.Acad.Sci.USA, 111, 2014
4BOS
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Structure of OTUD2 OTU domain in complex with Ubiquitin K11-linked peptide
分子名称: MAGNESIUM ION, NITRATE ION, OTUD2, ...
著者Mevissen, T.E.T, Hospenthal, M.K, Geurink, P.P, Elliott, P.R, Akutsu, M, Arnaudo, N, Ekkebus, R, Kulathu, Y, Wauer, T, El Oualid, F, Freund, S.M.V, Ovaa, H, Komander, D.
登録日2013-05-22
公開日2013-07-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Otu Deubiquitinases Reveal Mechanisms of Linkage Specificity and Enable Ubiquitin Chain Restriction Analysis.
Cell(Cambridge,Mass.), 154, 2013
1RHT
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24-MER RNA HAIRPIN COAT PROTEIN BINDING SITE FOR BACTERIOPHAGE R17 (NMR, MINIMIZED AVERAGE STRUCTURE)
分子名称: RNA (5'-R(P*GP*GP*GP*AP*CP*UP*GP*AP*CP*GP*AP*UP*CP*AP*CP*GP*CP*AP*GP*UP*CP*UP*AP*U)-3')
著者Borer, P.N, Lin, Y, Wang, S, Roggenbuck, M.W, Gott, J.M, Uhlenbeck, O.C, Pelczer, I.
登録日1995-03-03
公開日1995-06-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Proton NMR and structural features of a 24-nucleotide RNA hairpin.
Biochemistry, 34, 1995
3WCA
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The complex structure of TcSQS with ligand, FSPP
分子名称: Farnesyltransferase, putative, MAGNESIUM ION, ...
著者Shang, N, Li, Q, Ko, T.P, Chan, H.C, Huang, C.H, Oldfield, E, Guo, R.T.
登録日2013-05-26
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Squalene synthase as a target for Chagas disease therapeutics.
Plos Pathog., 10, 2014
6J9W
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Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with trehalose
分子名称: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ...
著者Kanaujia, S.P, Chandravanshi, M, Gogoi, P.
登録日2019-01-24
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Febs J., 287, 2020
4J2Q
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Crystal structure of C-terminally truncated arrestin reveals mechanism of arrestin activation
分子名称: S-arrestin
著者Kim, Y.J, Scheerer, P, Choe, H.-W.
登録日2013-02-05
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of pre-activated arrestin p44.
Nature, 497, 2013
6JAD
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Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with palatinose
分子名称: ABC transporter, periplasmic substrate-binding protein, CITRIC ACID, ...
著者Kanaujia, S.P, Chandravanshi, M, Gogoi, P.
登録日2019-01-24
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Febs J., 287, 2020
2JYU
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BU of 2jyu by Molmil
Human Granulin C, isomer 2
分子名称: Granulin-5
著者Tolkatchev, D, Wang, P, Chen, Z, Xu, P, Ni, F.
登録日2007-12-19
公開日2008-04-22
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.
Protein Sci., 17, 2008
3TWM
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BU of 3twm by Molmil
Crystal structure of Arabidopsis thaliana FPG
分子名称: 5'-D(*AP*GP*CP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*TP*GP*GP*TP*AP*GP*AP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3', Formamidopyrimidine-DNA glycosylase 1
著者Duclos, S, Aller, P, Wallace, S.S, Doublie, S.
登録日2011-09-22
公開日2012-07-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and biochemical studies of a plant formamidopyrimidine-DNA glycosylase reveal why eukaryotic Fpg glycosylases do not excise 8-oxoguanine.
Dna Repair, 11, 2012
3LGS
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A. thaliana MTA nucleosidase in complex with S-adenosylhomocysteine
分子名称: 1,2-ETHANEDIOL, 5'-methylthioadenosine nucleosidases, ADENINE, ...
著者Siu, K.K.W, Howell, P.L.
登録日2010-01-21
公開日2010-06-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism of substrate specificity in 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases.
J.Struct.Biol., 173, 2011
1MW3
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Amylosucrase soaked with 1M sucrose
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, amylosucrase, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Skov, L.K, Mirza, O, Sprogoe, D, Dar, I, Remaud-Simeon, M, Albenne, C, Monsan, P, Gajhede, M.
登録日2002-09-27
公開日2002-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Oligosaccharide and Sucrose Complexes of Amylosucrase. STRUCTURAL IMPLICATIONS FOR THE POLYMERASE ACTIVITY
J.BIOL.CHEM., 277, 2002
6JAP
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Crystal structure of ABC transporter alpha-glycoside-binding mutant protein R356A in complex with sucrose
分子名称: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ...
著者Kanaujia, S.P, Chandravanshi, M, Gogoi, P.
登録日2019-01-24
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Febs J., 287, 2020
4FIM
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Crystal Structure of C-lobe of Bovine lactoferrin Complexed with celecoxib acid at 1.80 A Resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[5-(4-METHYLPHENYL)-3-(TRIFLUOROMETHYL)-1H-PYRAZOL-1-YL]BENZENESULFONAMIDE, C-terminal peptide from Lactotransferrin, ...
著者Shukla, P.K, Gautam, L, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2012-06-09
公開日2012-06-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of C-lobe of Bovine lactoferrin Complexed with celecoxib acid at 1.80 A Resolution
To be Published
1RH4
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RH4 DESIGNED RIGHT-HANDED COILED COIL TETRAMER
分子名称: ISOPROPYL ALCOHOL, RIGHT-HANDED COILED COIL TETRAMER
著者Harbury, P.B, Plecs, J.J, Tidor, B, Alber, T, Kim, P.S.
登録日1998-10-07
公開日1998-12-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-resolution protein design with backbone freedom.
Science, 282, 1998
2FIM
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Structure of the C-terminal domain of Human Tubby-like protein 1
分子名称: 3-(N,N-DIMETHYLOCTYLAMMONIO)PROPANESULFONATE, SULFATE ION, Tubby related protein 1
著者Hallberg, B.M, Ogg, D, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Graslund, S, Hammarstrom, M, Hogbom, M, Holmberg-Schiavone, L, Kotenyova, T, Kursula, P, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Persson, C.
登録日2005-12-29
公開日2006-02-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the C-terminal domain of Human Tubby-like protein 1
To be published
1N4B
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Solution Structure of the undecamer CGAAAC*TTTCG
分子名称: 5'-D(*CP*GP*AP*AP*AP*CP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*D00*TP*TP*TP*CP*G)-3'
著者Webba da Silva, M, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P.
登録日2002-10-30
公開日2003-11-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of a DNA Duplex Containing Mispair-Aligned N4C-Ethyl-N4C Interstrand Cross-Linked Cytosines
Biochemistry, 41, 2002
6J4F
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Crystal structure of the AtWRKY2 domain
分子名称: DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3'), Probable WRKY transcription factor 2, ...
著者Xu, Y.P, Xu, H, Wang, B, Su, X.D.
登録日2019-01-08
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the AtWRKY2 domain
To Be Published
3LEY
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BU of 3ley by Molmil
2F5 Epitope scaffold elicited anti-HIV-1 monoclonal antibody 6a7 in complex with HIV-1 GP41
分子名称: 6a7 Antibody Heavy Chain, 6a7 Antibody Light Chain, Envelope glycoprotein gp41, ...
著者Ofek, G, Guenaga, F.J, Schief, W.R, Skinner, J, Baker, D, Wyatt, R, Kwong, P.D.
登録日2010-01-15
公開日2010-09-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Elicitation of structure-specific antibodies by epitope scaffolds.
Proc.Natl.Acad.Sci.USA, 107, 2010
3LGQ
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Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite (modified Tyr-303)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Tikhonova, T.V, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
登録日2010-01-21
公開日2011-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity.
Acta Crystallogr.,Sect.D, 68, 2012

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