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PDB: 46226 results

2WR1
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structure of influenza H2 hemagglutinin with human receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, ...
Authors:Liu, J, Stevens, D.J, Haire, L.F, Walker, P.A, Coombs, P.J, Russell, R.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2009-08-29
Release date:2009-09-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957.
Proc.Natl.Acad.Sci.USA, 106, 2009
2WO0
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BU of 2wo0 by Molmil
EDTA treated E. coli copper amine oxidase
Descriptor: COPPER (II) ION, PRIMARY AMINE OXIDASE, SODIUM ION
Authors:Smith, M.A, Pirrat, P, Pearson, A.R, Knowles, P.F, Phillips, S.E.V, McPherson, M.J.
Deposit date:2009-07-21
Release date:2010-05-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Exploring the Roles of the Metal Ions in Escherichia Coli Copper Amine Oxidase.
Biochemistry, 49, 2010
6Y83
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BU of 6y83 by Molmil
Capsid structure of Leishmania RNA virus 1
Descriptor: Capsid protein
Authors:Prochazkova, M, Fuzik, T, Grybtchuk, D, Falginella, F, Podesvova, L, Yurchenko, V, Vacha, R, Plevka, P.
Deposit date:2020-03-03
Release date:2020-11-11
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Capsid Structure of Leishmania RNA Virus 1.
J.Virol., 95, 2021
4XW5
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BU of 4xw5 by Molmil
X-ray structure of PKAc with ATP, CP20, calcium ions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A.
Deposit date:2015-01-28
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT.
J.Biol.Chem., 290, 2015
8FOU
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Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-tube
Descriptor: Virion-associated protein
Authors:Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
Deposit date:2023-01-03
Release date:2024-01-17
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
5J93
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Five minutes iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
Descriptor: CHLORIDE ION, FE (II) ION, Ferritin, ...
Authors:Pozzi, C, Di Pisa, F, Mangani, S, Bernacchioni, C, Turano, P.
Deposit date:2016-04-08
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Ferroxidase Activity in Eukaryotic Ferritin is Controlled by Accessory-Iron-Binding Sites in the Catalytic Cavity.
Chemistry, 22, 2016
6Y9Y
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BU of 6y9y by Molmil
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-7,13)
Descriptor: Gag-Pol polyprotein, Peptidyl-prolyl cis-trans isomerase A
Authors:Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P.
Deposit date:2020-03-10
Release date:2020-08-19
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A.
Nat.Struct.Mol.Biol., 27, 2020
8FOY
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BU of 8foy by Molmil
Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-sheath
Descriptor: Tail sheath protein
Authors:Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
Deposit date:2023-01-03
Release date:2024-01-17
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
5LLU
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BU of 5llu by Molmil
Structure of the thermostabilized EAAT1 cryst-II mutant in complex with L-ASP
Descriptor: ASPARTIC ACID, Excitatory amino acid transporter 1,Neutral amino acid transporter B(0),Excitatory amino acid transporter 1, SODIUM ION
Authors:Canul-Tec, J, Assal, R, Legrand, P, Reyes, N.
Deposit date:2016-07-28
Release date:2017-04-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Structure and allosteric inhibition of excitatory amino acid transporter 1.
Nature, 544, 2017
8AYR
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BU of 8ayr by Molmil
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Descriptor: CALCIUM ION, Coagulation factor 5/8 type domain protein
Authors:Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P.
Deposit date:2022-09-02
Release date:2023-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria.
Nat Commun, 14, 2023
6FW7
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BU of 6fw7 by Molmil
Crystal structure of L-tryptophan oxidase VioA from Chromobacterium violaceum in complex with 4-Fluoro-L-Tryptophan
Descriptor: 4-FLUOROTRYPTOPHANE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent L-tryptophan oxidase VioA, ...
Authors:Lai, H.E, Morgan, M, Moore, S, Freemont, P.
Deposit date:2018-03-05
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:A GenoChemetic strategy for derivatization of the violacein natural product scaffold
Biorxiv, 2019
8QKK
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BU of 8qkk by Molmil
Cryo-EM structure of MmpL3 from Mycobacterium smegmatis reconstituted into peptidiscs
Descriptor: Trehalose monomycolate exporter MmpL3
Authors:Couston, J, Guo, Z, Wang, K, Gourdon, P.E, Blaise, M.
Deposit date:2023-09-15
Release date:2023-11-15
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Cryo-EM structure of the trehalose monomycolate transporter, MmpL3, reconstituted into peptidiscs.
Curr Res Struct Biol, 6, 2023
6A3N
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BU of 6a3n by Molmil
Crystal structure of the PDE9 catalytic domain in complex with inhibitor 2
Descriptor: 1-cyclopentyl-6-({(2R)-1-[(3S)-3-fluoropyrrolidin-1-yl]-1-oxopropan-2-yl}amino)-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Wu, Y.N, Zhou, Q, Chen, Y.P, Luo, H.B.
Deposit date:2018-06-15
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Inhibitors against Phosphodiesterase-9, a Novel Target for the Treatment of Vascular Dementia.
J. Med. Chem., 62, 2019
8FMP
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BU of 8fmp by Molmil
Complex structure of K210 deletion Troponin complex with pamidronate
Descriptor: CALCIUM ION, Troponin C, slow skeletal and cardiac muscles, ...
Authors:Wang, P, Ahmed, M, Sadek, H.
Deposit date:2022-12-24
Release date:2024-01-31
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Structural and Phenotypic Correction of K210del Genetic Cardiomyopathy by an FDA Approved drug
To Be Published
6YCD
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BU of 6ycd by Molmil
Structure the ananain protease from Ananas comosus covalently bound to the TLCK inhibitor
Descriptor: Ananain, GLYCEROL, N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide, ...
Authors:Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
Deposit date:2020-03-18
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
8FMM
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BU of 8fmm by Molmil
Complex structure of wild type Troponin complex
Descriptor: CALCIUM ION, Troponin C, slow skeletal and cardiac muscles, ...
Authors:Wang, P, Ahmed, M, Sadek, H.
Deposit date:2022-12-23
Release date:2024-01-31
Method:X-RAY DIFFRACTION (3.112 Å)
Cite:Structural and Phenotypic Correction of K210del Genetic Cardiomyopathy by an FDA Approved drug
To Be Published
4HMB
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BU of 4hmb by Molmil
Crystal Structure of the complex of group II phospholipase A2 with a 3-{3-[(Dimethylamino)methyl]-1H-indol-7-yl}propan-1-ol at 2.21 A Resolution
Descriptor: 3-{3-[(DIMETHYLAMINO)METHYL]-1H-INDOL-7-YL}PROPAN-1-OL, Phospholipase A2 VRV-PL-VIIIa
Authors:Shukla, P.K, Haridas, M, Chandra, D.N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-10-18
Release date:2012-11-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of the complex of group II phospholipase A2 with a 3-{3-[(Dimethylamino)methyl]-1H-indol-7-yl}propan-1-ol at 2.21 A Resolution
To be Published
6G7E
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BU of 6g7e by Molmil
Crystal structure of Chaetomium thermophilum Mot1 (E1434Q, 1837-1886 deletion mutant)
Descriptor: Helicase-like protein
Authors:Butryn, A, Hopfner, K.-P.
Deposit date:2018-04-05
Release date:2018-10-17
Method:X-RAY DIFFRACTION (3.2129 Å)
Cite:Crystal structure of the full Swi2/Snf2 remodeler Mot1 in the resting state.
Elife, 7, 2018
5X2K
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BU of 5x2k by Molmil
Crystal structure of EGFR 696-1022 T790M in complex with WZ4003
Descriptor: Epidermal growth factor receptor, N-{3-[(5-chloro-2-{[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}prop-2-enamide
Authors:Zhu, S.J, Zhao, P, Yun, C.H.
Deposit date:2017-02-01
Release date:2018-02-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Structural insights into drug development strategy targeting EGFR T790M/C797S.
Oncotarget, 9, 2018
4V2F
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BU of 4v2f by Molmil
Tetracycline repressor TetR(D), unliganded
Descriptor: TETRACYCLINE REPRESSOR PROTEIN CLASS D
Authors:Werten, S, Orth, P, Saenger, W, Hinrichs, W.
Deposit date:2014-10-09
Release date:2014-12-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition.
Biochemistry, 53, 2014
5IU8
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BU of 5iu8 by Molmil
Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with compound 12f at 2.0A resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-(furan-2-yl)-N~5~-[2-(4-methylpiperazin-1-yl)ethyl][1,2,4]triazolo[1,5-a][1,3,5]triazine-5,7-diamine, ...
Authors:Segala, E, Guo, D, Cheng, R.K.Y, Bortolato, A, Deflorian, F, Dore, A.S, Errey, J.C, Heitman, L.H, Ijzerman, A.P, Marshall, F.H, Cooke, R.M.
Deposit date:2016-03-17
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Controlling the Dissociation of Ligands from the Adenosine A2A Receptor through Modulation of Salt Bridge Strength.
J.Med.Chem., 59, 2016
5W88
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BU of 5w88 by Molmil
NMR structure of the N-domain of troponin C bound to switch region of troponin I and 3-methyldiphenylamine (peptide mode)
Descriptor: 3-methyl-N-phenylaniline, Troponin C, Troponin I
Authors:Cai, F, Hwang, P.M, Sykes, B.D.
Deposit date:2017-06-21
Release date:2017-07-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures reveal details of small molecule binding to cardiac troponin.
J. Mol. Cell. Cardiol., 101, 2016
5WCL
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BU of 5wcl by Molmil
NMR structure of the N-domain of troponin C bound to switch region of troponin I and 3-methyldiphenylamine (solvent exposed mode)
Descriptor: 3-methyl-N-phenylaniline, Troponin C, slow skeletal and cardiac muscles,Troponin I, ...
Authors:Cai, F, Hwang, P.M, Sykes, B.D.
Deposit date:2017-06-30
Release date:2017-07-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures reveal details of small molecule binding to cardiac troponin.
J. Mol. Cell. Cardiol., 101, 2016
5WXE
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BU of 5wxe by Molmil
Highly disulfide-constrained antifeedant jasmintides from Jasminum sambac flowers
Descriptor: jasmintide js3
Authors:Kumari, G, Wong, K.H, Serra, A, Shin, J, Yoon, H.S, Sze, S.K, James, P.T.
Deposit date:2017-01-07
Release date:2018-01-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Highly disulfide-constrained antifeedant jasmintides from Jasminum sambac flowers
To Be Published
5LVU
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BU of 5lvu by Molmil
XiaF (apo) from Streptomyces sp.
Descriptor: SULFATE ION, XiaF protein
Authors:Kugel, S, Baunach, M, Baer, P, Ishida-Ito, M, Sundaram, S, Xu, Z, Groll, M, Hertweck, C.
Deposit date:2016-09-14
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cryptic indole hydroxylation by a non-canonical terpenoid cyclase parallels bacterial xenobiotic detoxification.
Nat Commun, 8, 2017

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