Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 results

4OJV
DownloadVisualize
BU of 4ojv by Molmil
Crystal structure of unliganded yeast PDE1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3',5'-cyclic-nucleotide phosphodiesterase 1, SULFATE ION, ...
Authors:Tian, Y, Cui, W, Huang, M, Robinson, H, Wan, Y, Wang, Y, Ke, H.
Deposit date:2014-01-21
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Dual specificity and novel structural folding of yeast phosphodiesterase-1 for hydrolysis of second messengers cyclic adenosine and guanosine 3',5'-monophosphate.
Biochemistry, 53, 2014
4OP5
DownloadVisualize
BU of 4op5 by Molmil
Crystal structure of stabilized TEM-1 beta-lactamase variant v.13 carrying R164S mutation
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Extended spectrum beta-lactamase TEM-63, ...
Authors:Dellus-Gur, E, Elias, M, Fraser, J.S, Tawfik, D.S.
Deposit date:2014-02-05
Release date:2015-05-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Negative Epistasis and Evolvability in TEM-1 beta-Lactamase--The Thin Line between an Enzyme's Conformational Freedom and Disorder.
J. Mol. Biol., 427, 2015
4OLL
DownloadVisualize
BU of 4oll by Molmil
cAMP-binding acyltransferase from Mycobacterium smegmatis
Descriptor: Acetyltransferase Pat, CALCIUM ION, MERCURY (II) ION
Authors:Podobnik, M, Rebolj, K, Visweswariah, S.S.
Deposit date:2014-01-24
Release date:2014-04-30
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Allostery and Conformational Dynamics in cAMP-binding Acyltransferases.
J.Biol.Chem., 289, 2014
4OQH
DownloadVisualize
BU of 4oqh by Molmil
Crystal structure of stabilized TEM-1 beta-lactamase variant v.13 carrying R164S mutation in complex with boron-based inhibitor EC25
Descriptor: 1,2-ETHANEDIOL, 3-[(2R)-2-{[(2R)-2-amino-2-phenylacetyl]amino}-2-(dihydroxyboranyl)ethyl]benzoic acid, CALCIUM ION, ...
Authors:Dellus-Gur, E, Elias, M, Fraser, J.S, Tawfik, D.S.
Deposit date:2014-02-09
Release date:2015-05-20
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Negative Epistasis and Evolvability in TEM-1 beta-Lactamase--The Thin Line between an Enzyme's Conformational Freedom and Disorder.
J. Mol. Biol., 427, 2015
4OMH
DownloadVisualize
BU of 4omh by Molmil
Crystal structure of the bacterial diterpene cyclase COTB2 variant F149L
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Geranylgeranyl diphosphate cyclase, SODIUM ION
Authors:Janke, R, Goerner, C, Hirte, M, Brueck, T, Loll, B.
Deposit date:2014-01-27
Release date:2014-06-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:The first structure of a bacterial diterpene cyclase: CotB2.
Acta Crystallogr.,Sect.D, 70, 2014
2Z82
DownloadVisualize
BU of 2z82 by Molmil
Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide
Descriptor: (2R)-3-{[(2R)-2-AMINO-3-HYDROXYPROPYL]THIO}PROPANE-1,2-DIYL DIHEXADECANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lee, J.O, Jin, M.S, Kim, S.E, Heo, J.Y.
Deposit date:2007-08-30
Release date:2007-10-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the TLR1-TLR2 Heterodimer Induced by Binding of a Tri-Acylated Lipopeptide
Cell(Cambridge,Mass.), 130, 2007
4OQZ
DownloadVisualize
BU of 4oqz by Molmil
Streptomyces aurantiacus imine reductase
Descriptor: Putative oxidoreductase YfjR
Authors:Schneider, L.K, Huber, T, Gerhardt, S, Muller, M, Einsle, O.
Deposit date:2014-02-10
Release date:2014-10-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Direct Reductive Amination of Ketones: Structure and Activity of S-Selective Imine Reductases from Streptomyces.
CHEMCATCHEM, 2014
4N85
DownloadVisualize
BU of 4n85 by Molmil
Crystal structure of human transthyretin
Descriptor: CALCIUM ION, Transthyretin
Authors:Yokoyama, T, Kosaka, Y, Mizuguchi, M.
Deposit date:2013-10-17
Release date:2014-02-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of human transthyretin complexed with glabridin
J.Med.Chem., 57, 2014
4N9E
DownloadVisualize
BU of 4n9e by Molmil
Fragment-based Design of 3-Aminopyridine-derived Amides as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)
Descriptor: 1,2-ETHANEDIOL, 1-[(1-benzoylpiperidin-4-yl)methyl]-N-(pyridin-3-yl)-1H-benzimidazole-5-carboxamide, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ...
Authors:Dragovich, P.S, Zhao, G, Baumeister, T, Bravo, B, Giannetti, A.M, Ho, Y, Hua, R, Li, G, Liang, X, O'Brien, T, Skelton, N.J, Wang, C, Zhao, Q, Oh, A, Wang, W, Wang, Y, Xiao, Y, Yuen, P, Zak, M, Zheng, X.
Deposit date:2013-10-20
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Fragment-based design of 3-aminopyridine-derived amides as potent inhibitors of human nicotinamide phosphoribosyltransferase (NAMPT).
Bioorg.Med.Chem.Lett., 24, 2014
3PW9
DownloadVisualize
BU of 3pw9 by Molmil
Structural and functional Analysis of Arabidopsis thaliana thylakoid lumen protein AtTLP18.3
Descriptor: CALCIUM ION, GLYCEROL, SERINE, ...
Authors:Wu, H.Y, Liu, M.S, Lin, T.P, Cheng, Y.S.
Deposit date:2010-12-08
Release date:2011-10-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional assays of AtTLP18.3 identify its novel acid phosphatase activity in thylakoid lumen
Plant Physiol., 157, 2011
4NAR
DownloadVisualize
BU of 4nar by Molmil
Crystal Structure of the Q9WYS3 protein from Thermotoga maritima. Northeast Structural Genomics Consortium Target VR152
Descriptor: ACETATE ION, Putative uronate isomerase, SULFATE ION
Authors:Vorobiev, S, Lew, S, Seetharaman, J, Chi, Y, Xiao, R, Maglaqui, M, Lee, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-10-22
Release date:2013-11-06
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Crystal Structure of the Q9WYS3 protein from Thermotoga maritima.
To be Published
4NBN
DownloadVisualize
BU of 4nbn by Molmil
Tailoring Small Molecules for an Allosteric Site on Procaspase-6
Descriptor: 2,2'-[pyrimidine-4,6-diylbis(iminomethanediyl)]diphenol, Caspase-6, PHOSPHATE ION
Authors:Murray, J.M, Steffek, M.
Deposit date:2013-10-23
Release date:2013-12-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Tailoring small molecules for an allosteric site on procaspase-6.
Chemmedchem, 9, 2014
6VR0
DownloadVisualize
BU of 6vr0 by Molmil
Agrobacterium Tumefaciens ADP-glucose pyrophosphorylase W106A
Descriptor: GLYCEROL, Glucose-1-phosphate adenylyltransferase, SULFATE ION
Authors:Mascarenhas, R.N, Liu, D, Ballicora, M, Iglesias, A, Asencion, M, Figueroa, C.
Deposit date:2020-02-06
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Agrobacterium Tumefaciens ADP-glucose pyrophosphorylase W106A
To Be Published
4MZW
DownloadVisualize
BU of 4mzw by Molmil
CRYSTAL STRUCTURE OF NU-CLASS GLUTATHIONE TRANSFERASE YGHU FROM Streptococcus sanguinis SK36, COMPLEX WITH GLUTATHIONE DISULFIDE, TARGET EFI-507286
Descriptor: ACETATE ION, Glutathione S-Transferase, OXIDIZED GLUTATHIONE DISULFIDE
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-09-30
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Glutathione S-Transferase Yghu (Target Efi-507286)
To be Published
4N06
DownloadVisualize
BU of 4n06 by Molmil
Crystal structure of Cas1 from Archaeoglobus fulgidus and its nucleolytic activity
Descriptor: CRISPR-associated endonuclease Cas1 1
Authors:Kim, T.Y, Shin, M, Yen, L.H.T, Kim, J.S.
Deposit date:2013-10-01
Release date:2014-01-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Cas1 from Archaeoglobus fulgidus and characterization of its nucleolytic activity
Biochem.Biophys.Res.Commun., 441, 2013
4N5D
DownloadVisualize
BU of 4n5d by Molmil
Tailoring Small Molecules for an Allosteric Site on Procaspase-6: Cpd1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-amino-2,8-dimethylpyrido[2,3-d]pyrimidin-7(8H)-one, Caspase-6, ...
Authors:Murray, J.M, Steffek, M.
Deposit date:2013-10-09
Release date:2013-12-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Tailoring small molecules for an allosteric site on procaspase-6.
Chemmedchem, 9, 2014
4N2K
DownloadVisualize
BU of 4n2k by Molmil
Crystal structure of Protein Arginine Deiminase 2 (Q350A, 0 mM Ca2+)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Slade, D.J, Zhang, X, Fang, P, Dreyton, C.J, Zhang, Y, Gross, M.L, Guo, M, Coonrod, S.A, Thompson, P.R.
Deposit date:2013-10-05
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design.
Acs Chem.Biol., 10, 2015
2XU6
DownloadVisualize
BU of 2xu6 by Molmil
MDV1 coiled coil domain
Descriptor: MDV1 COILED COIL
Authors:Koirala, S, Bui, H.T, Schubert, H.L, Eckert, D.M, Hill, C.P, Kay, M.S, Shaw, J.M.
Deposit date:2010-10-14
Release date:2010-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Architecture of a Dynamin Adaptor: Implications for Assembly of Mitochondrial Fission Complexes
J.Cell Biol., 191, 2010
4N86
DownloadVisualize
BU of 4n86 by Molmil
Crystal structure of human transthyretin complexed with glabridin
Descriptor: 4-[(3R)-8,8-dimethyl-3,4-dihydro-2H,8H-pyrano[2,3-f]chromen-3-yl]benzene-1,3-diol, CALCIUM ION, Transthyretin
Authors:Yokoyama, T, Kosaka, Y, Mizuguchi, M.
Deposit date:2013-10-17
Release date:2014-02-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Crystal structures of human transthyretin complexed with glabridin
J.Med.Chem., 57, 2014
6B6F
DownloadVisualize
BU of 6b6f by Molmil
Beta-Lactamase, mixed with Ceftriaxone, needles crystal form, 2sec
Descriptor: Beta-lactamase, Ceftriaxone
Authors:Pandey, S, Schmidt, M.
Deposit date:2017-10-01
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.
BMC Biol., 16, 2018
4NEY
DownloadVisualize
BU of 4ney by Molmil
Crystal Structure of an engineered protein with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR277
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Engineered protein OR277, tetrabutylphosphonium
Authors:Guan, R, Lin, Y.-R, Koga, N, Koga, R, Castellanos, J, Seetharaman, J, Maglaqui, M, Sahdev, S, Mao, L, Xiao, R, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-10-30
Release date:2014-01-15
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Northeast Structural Genomics Consortium Target OR277
To be published
6MTX
DownloadVisualize
BU of 6mtx by Molmil
Crystal structure of a human anti-ZIKV-DENV neutralizing antibody MZ1 isolated following ZPIV vaccination
Descriptor: GLYCEROL, MZ1 Heavy Chain, MZ1 Light Chain
Authors:Sankhala, R.S, Dussupt, V, Donofrio, G, Choe, M, Modjarrad, K, Michael, N.L, Krebs, S.J, Joyce, M.G.
Deposit date:2018-10-22
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Potent Zika and dengue cross-neutralizing antibodies induced by Zika vaccination in a dengue-experienced donor.
Nat Med, 26, 2020
4NC0
DownloadVisualize
BU of 4nc0 by Molmil
Crystal Structure of TcdA-A2 Bound to A26.8 VHH
Descriptor: A26.8 VHH, Cell wall-binding repeat protein
Authors:Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E.N, Klassen, J.S, Ng, K.K.S.
Deposit date:2013-10-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
4NC8
DownloadVisualize
BU of 4nc8 by Molmil
N-terminal domain of delta-subunit of RNA polymerase complexed with nickel ions
Descriptor: DNA-directed RNA polymerase subunit delta, NICKEL (II) ION
Authors:Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M.
Deposit date:2013-10-24
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase.
J.Struct.Biol., 187, 2014
2XU8
DownloadVisualize
BU of 2xu8 by Molmil
Structure of Pa1645
Descriptor: PA1645, SULFATE ION
Authors:Abdelli, W.B, Moynie, L, McMahon, S.A, Liu, H, Alphey, M.S, Naismith, J.H.
Deposit date:2010-10-15
Release date:2010-12-29
Last modified:2015-08-19
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery
Acta Crystallogr.,Sect.F, 69, 2013

224201

數據於2024-08-28公開中

PDB statisticsPDBj update infoContact PDBjnumon