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PDB: 51630 results

3MFY
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Structural characterization of the subunit A mutant F236A of the A-ATP synthase from Pyrococcus horikoshii
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Balakrishna, A.M, Kumar, A, Manimekali, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2010-04-05
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The critical roles of residues P235 and F236 of subunit A of the motor protein A-ATP synthase in P-loop formation and nucleotide binding.
J.Mol.Biol., 401, 2010
3B7H
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Crystal structure of the prophage Lp1 protein 11
Descriptor: Prophage Lp1 protein 11
Authors:Zhang, R, Zhou, M, Keigher, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-10-30
Release date:2007-12-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the prophage Lp1 protein 11.
To be Published
7TZ7
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PI3K alpha in complex with an inhibitor
Descriptor: (4S,5R)-3-[2'-amino-2-(morpholin-4-yl)-4'-(trifluoromethyl)[4,5'-bipyrimidin]-6-yl]-4-(hydroxymethyl)-5-methyl-1,3-oxazolidin-2-one, Isoform 3 of Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Knapp, M.S, Tang, J.
Deposit date:2022-02-15
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Identification of NVP-CLR457 as an Orally Bioavailable Non-CNS-Penetrant pan-Class IA Phosphoinositol-3-Kinase Inhibitor.
J.Med.Chem., 65, 2022
3BA6
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Structure of the Ca2E1P phosphoenzyme intermediate of the SERCA Ca2+-ATPase
Descriptor: AMP PHOSPHORAMIDATE, CALCIUM ION, POTASSIUM ION, ...
Authors:Picard, M, Winther, A.M.L, Olesen, C, Gyrup, C, Morth, J.P, Oxvig, C, Moller, J.V, Nissen, P.
Deposit date:2007-11-07
Release date:2007-12-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structural basis of calcium transport by the calcium pump.
Nature, 450, 2007
3BGE
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Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae
Descriptor: Predicted ATPase, SULFATE ION
Authors:Ramagopal, U.A, Patskovsky, Y, Bonanno, J.B, Meyer, A.J, Toro, R, Freeman, J, Adams, J, Koss, J, Maletic, M, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-26
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae.
To be Published
3BIK
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Crystal Structure of the PD-1/PD-L1 Complex
Descriptor: GLYCEROL, Programmed cell death 1 ligand 1, Programmed cell death protein 1
Authors:Lin, D.Y, Tanaka, Y, Iwasaki, M, Gittis, A.G, Su, H.P, Mikami, B, Okazaki, T, Honjo, T, Minato, N, Garboczi, D.N.
Deposit date:2007-11-30
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The PD-1/PD-L1 complex resembles the antigen-binding Fv domains of antibodies and T cell receptors.
Proc.Natl.Acad.Sci.Usa, 105, 2008
7WGQ
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X-ray structure of human PPAR gamma ligand binding domain-pemafibrate co-crystals obtained by co-crystallization
Descriptor: (2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid, 15-meric peptide from Nuclear receptor coactivator 1, Isoform 1 of Peroxisome proliferator-activated receptor gamma
Authors:Kamata, S, Honda, A, Akahane, M, Machida, Y, Uchii, K, Shiiyama, Y, Masuda, R, Oyama, T, Ishii, I.
Deposit date:2021-12-28
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Functional and Structural Insights into Human PPAR alpha / delta / gamma Subtype Selectivity of Bezafibrate, Fenofibric Acid, and Pemafibrate.
Int J Mol Sci, 23, 2022
7WGO
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X-ray structure of human PPAR gamma ligand binding domain-bezafibrate co-rystals obtained by co-crystallization
Descriptor: 15-meric peptide from Nuclear receptor coactivator 1, 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, Isoform 1 of Peroxisome proliferator-activated receptor gamma
Authors:Kamata, S, Honda, A, Akahane, M, Machida, Y, Uchii, K, Shiiyama, Y, Masuda, R, Oyama, T, Ishii, I.
Deposit date:2021-12-28
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Functional and Structural Insights into Human PPAR alpha / delta / gamma Subtype Selectivity of Bezafibrate, Fenofibric Acid, and Pemafibrate.
Int J Mol Sci, 23, 2022
7WGN
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X-ray structure of human PPAR delta ligand binding domain-pemafibrate co-crystals obtained by co-crystallization
Descriptor: (2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid, Peroxisome proliferator-activated receptor delta, octyl beta-D-glucopyranoside
Authors:Kamata, S, Honda, A, Akahane, M, Machida, Y, Uchii, K, Shiiyama, Y, Masuda, R, Oyama, T, Ishii, I.
Deposit date:2021-12-28
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.813 Å)
Cite:Functional and Structural Insights into Human PPAR alpha / delta / gamma Subtype Selectivity of Bezafibrate, Fenofibric Acid, and Pemafibrate.
Int J Mol Sci, 23, 2022
7WGP
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BU of 7wgp by Molmil
X-ray structure of human PPAR gamma ligand binding domain-fenofibric acid co-crystals obtained by co-crystallization
Descriptor: 15-meric peptide from Nuclear receptor coactivator 1, 2-[4-(4-chlorobenzene-1-carbonyl)phenoxy]-2-methylpropanoic acid, Isoform 1 of Peroxisome proliferator-activated receptor gamma
Authors:Kamata, S, Honda, A, Akahane, M, Machida, Y, Uchii, K, Shiiyama, Y, Masuda, R, Oyama, T, Ishii, I.
Deposit date:2021-12-28
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Functional and Structural Insights into Human PPAR alpha / delta / gamma Subtype Selectivity of Bezafibrate, Fenofibric Acid, and Pemafibrate.
Int J Mol Sci, 23, 2022
3BFH
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BU of 3bfh by Molmil
Crystal structure of a pheromone binding protein from Apis mellifera in complex with hexadecanoic acid
Descriptor: CHLORIDE ION, PALMITIC ACID, Pheromone-binding protein ASP1
Authors:Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
Deposit date:2007-11-21
Release date:2008-06-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the honey bee PBP pheromone and pH-induced conformational change
J.Mol.Biol., 380, 2008
7W4P
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BU of 7w4p by Molmil
The structure of KATP H175K mutant in closed state
Descriptor: 6-chloranyl-~{N}-(1-methylcyclopropyl)-1,1-bis(oxidanylidene)-4~{H}-thieno[3,2-e][1,2,4]thiadiazin-3-amine, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Chen, L, Wang, M.
Deposit date:2021-11-28
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural insights into the mechanism of pancreatic K ATP channel regulation by nucleotides.
Nat Commun, 13, 2022
3B85
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Crystal structure of predicted phosphate starvation-induced ATPase PhoH2 from Corynebacterium glutamicum
Descriptor: Phosphate starvation-inducible protein, SULFATE ION
Authors:Cuff, M.E, Wu, R, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-10-31
Release date:2007-12-18
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A structure of predicted phosphate starvation-induced ATPase PhoH2 from Corynebacterium glutamicum.
TO BE PUBLISHED
3B0N
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BU of 3b0n by Molmil
Q448K mutant of assimilatory nitrite reductase (Nii3) from tobbaco leaf
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
Authors:Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
Deposit date:2011-06-10
Release date:2012-02-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-function relationship of assimilatory nitrite reductases from the leaf and root of tobacco based on high resolution structures
Protein Sci., 21, 2012
3B2C
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Crystal structure of the collagen triple helix model [{PRO-HYP(R)-GLY}4-{HYP(S)-Pro-GLY}2-{PRO-HYP(R)-GLY}4]3
Descriptor: Collagen-like peptide
Authors:Motooka, D, Kawahara, K, Nakamura, S, Doi, M, Nishi, Y, Nishiuchi, Y, Nakazawa, T, Yoshida, T, Ohkubo, T, Kobayashi, Y, Kang, Y.K, Uchiyama, S.
Deposit date:2011-07-26
Release date:2012-04-04
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-pro-gly units
Biopolymers, 98, 2011
7W4O
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The structure of KATP H175K mutant in pre-open state
Descriptor: 6-chloranyl-~{N}-(1-methylcyclopropyl)-1,1-bis(oxidanylidene)-4~{H}-thieno[3,2-e][1,2,4]thiadiazin-3-amine, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Chen, L, Wang, M.
Deposit date:2021-11-28
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural insights into the mechanism of pancreatic K ATP channel regulation by nucleotides.
Nat Commun, 13, 2022
3BHO
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Crystal Structure of the 25kDa Subunit of Human Cleavage factor Im with Ap4A
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Cleavage and polyadenylation specificity factor subunit 5
Authors:Coseno, M, Doublie, S.
Deposit date:2007-11-28
Release date:2008-02-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the 25 kDa subunit of human cleavage factor Im.
Nucleic Acids Res., 36, 2008
3BID
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BU of 3bid by Molmil
Crystal structure of the NMB1088 protein from Neisseria meningitidis. Northeast Structural Genomics Consortium target MR91
Descriptor: UPF0339 protein NMB1088
Authors:Forouhar, F, Neely, H, Seetharaman, J, Mao, L, Fang, Y, Xiao, R, Owen, L.A, Maglaqui, M, Cunningham, K, Baran, M.C, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-11-30
Release date:2007-12-18
Last modified:2020-01-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the NMB1088 protein from Neisseria meningitidis.
To be Published
3BJD
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Crystal structure of putative 3-oxoacyl-(acyl-carrier-protein) synthase from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, NICKEL (II) ION, Putative 3-oxoacyl-(acyl-carrier-protein) synthase
Authors:Osipiuk, J, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-12-03
Release date:2007-12-11
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of putative 3-oxoacyl-(acyl-carrier-protein) synthase from Pseudomonas aeruginosa.
To be Published
3B6Y
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BU of 3b6y by Molmil
Crystal Structure of the Second HIN-200 Domain of Interferon-Inducible Protein 16
Descriptor: Gamma-interferon-inducible protein Ifi-16, SULFATE ION
Authors:Liao, J.C.C, Lam, R, Ravichandran, M, Duan, S, Tempel, W, Chirgadze, N.Y, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-10-29
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure Analysis of the Second HIN Domain of IFI16.
To be Published
3B7R
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BU of 3b7r by Molmil
Leukotriene A4 Hydrolase Complexed with Inhibitor RB3040
Descriptor: IMIDAZOLE, Leukotriene A-4 hydrolase, N-[3-[(1-AMINOETHYL)(HYDROXY)PHOSPHORYL]-2-(1,1'-BIPHENYL-4-YLMETHYL)PROPANOYL]ALANINE, ...
Authors:Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
Deposit date:2007-10-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.811 Å)
Cite:Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008
3B2K
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Iodide derivative of human LFABP
Descriptor: Fatty acid-binding protein, liver, IODIDE ION, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
7UE1
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BU of 7ue1 by Molmil
HIV-1 Integrase Catalytic Core Domain Mutant (KGD) in Complex with Inhibitor GRL-142
Descriptor: (3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(3,5-difluorophenyl)-3-hydroxybutan-2-yl]carbamate, Integrase, SULFATE ION
Authors:Aoki, M, Aoki-Ogata, H, Bulut, H, Hayashi, H, Davis, D, Hasegawa, K, Yarchoan, R, Ghosh, A.K, Pau, A.K, Mitsuya, H.
Deposit date:2022-03-21
Release date:2023-03-22
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:GRL-142 binds to and impairs HIV-1 integrase nuclear localization signal and potently suppresses highly INSTI-resistant HIV-1 variants.
Sci Adv, 9, 2023
3B96
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Structural Basis for Substrate Fatty-Acyl Chain Specificity: Crystal Structure of Human Very-Long-Chain Acyl-CoA Dehydrogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, TETRADECANOYL-COA, Very long-chain specific acyl-CoA dehydrogenase
Authors:McAndrew, R.P, Wang, Y, Mohsen, A.W, He, M, Vockley, J, Kim, J.J.
Deposit date:2007-11-02
Release date:2008-02-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural basis for substrate fatty acyl chain specificity: crystal structure of human very-long-chain acyl-CoA dehydrogenase.
J.Biol.Chem., 283, 2008
7UEP
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PANK3 complex structure with compound PZ-3860
Descriptor: 1,2-ETHANEDIOL, 1-[(2R)-4-(6-chloropyridazin-3-yl)-2-methylpiperazin-1-yl]-2-(4-cyclopropylphenyl)ethan-1-one, MAGNESIUM ION, ...
Authors:White, S.W, Yun, M, Lee, R.E.
Deposit date:2022-03-22
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of hPANK Activators with Improved Pharmacological Properties
To Be Published

224201

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