Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 件

2XU8
DownloadVisualize
BU of 2xu8 by Molmil
Structure of Pa1645
分子名称: PA1645, SULFATE ION
著者Abdelli, W.B, Moynie, L, McMahon, S.A, Liu, H, Alphey, M.S, Naismith, J.H.
登録日2010-10-15
公開日2010-12-29
最終更新日2015-08-19
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery
Acta Crystallogr.,Sect.F, 69, 2013
4NFA
DownloadVisualize
BU of 4nfa by Molmil
Structure of the C-terminal doamin of Knl1
分子名称: CHLORIDE ION, GLYCEROL, Protein CASC5
著者Petrovic, A, Mosalaganti, S, Keller, J, Mattiuzzo, M, Overlack, K, Wohlgemuth, S, Pasqualato, S, Raunser, S, Musacchio, A.
登録日2013-10-31
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Modular Assembly of RWD Domains on the Mis12 Complex Underlies Outer Kinetochore Organization.
Mol.Cell, 53, 2014
109D
DownloadVisualize
BU of 109d by Molmil
VARIABILITY IN DNA MINOR GROOVE WIDTH RECOGNISED BY LIGAND BINDING: THE CRYSTAL STRUCTURE OF A BIS-BENZIMIDAZOLE COMPOUND BOUND TO THE DNA DUPLEX D(CGCGAATTCGCG)2
分子名称: 5-(2-IMIDAZOLINYL)-2-[2-(4-HYDROXYPHENYL)-5-BENZIMIDAZOLYL]BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Czarny, A, Boykin, D.W, Wood, A.A, Nunn, C.M, Neidle, S, Zhao, M, Wilson, W.D.
登録日1995-02-15
公開日1995-05-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Variability in DNA minor groove width recognised by ligand binding: the crystal structure of a bis-benzimidazole compound bound to the DNA duplex d(CGCGAATTCGCG)2.
Nucleic Acids Res., 23, 1995
4NO6
DownloadVisualize
BU of 4no6 by Molmil
yCP in complex with Z-Leu-Leu-Leu-vinylsulfone
分子名称: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(3S)-5-methyl-1-(methylsulfonyl)hexan-3-yl]-L-leucinamide, Probable proteasome subunit alpha type-7, ...
著者Stein, M.L, Cui, H, Beck, P, Dubiella, C, Voss, C, Krueger, A, Schmidt, B, Groll, M.
登録日2013-11-19
公開日2014-02-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Systematic Comparison of Peptidic Proteasome Inhibitors Highlights the alpha-Ketoamide Electrophile as an Auspicious Reversible Lead Motif.
Angew.Chem.Int.Ed.Engl., 53, 2014
4NEH
DownloadVisualize
BU of 4neh by Molmil
An internal ligand-bound, metastable state of a leukocyte integrin, aXb2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Sen, M, Yuki, K, Springer, T.A.
登録日2013-10-29
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7505 Å)
主引用文献An internal ligand-bound, metastable state of a leukocyte integrin, alpha X beta 2.
J.Cell Biol., 203, 2013
1L9C
DownloadVisualize
BU of 1l9c by Molmil
Role of Histidine 269 in Catalysis by Monomeric Sarcosine Oxidase
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric Sarcosine Oxidase, ...
著者Zhao, G, Song, H, Chen, Z.-w, Mathews, F.S, Jorns, M.S.
登録日2002-03-22
公開日2002-08-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
6WBX
DownloadVisualize
BU of 6wbx by Molmil
Single-Particle Cryo-EM Structure of Arabinofuranosyltransferase AftD from Mycobacteria, Mutant R1389S Class 1
分子名称: CALCIUM ION, DUF3367 domain-containing protein
著者Tan, Y.Z, Zhang, L, Rodrigues, J, Zheng, R.B, Giacometti, S.I, Rosario, A.L, Kloss, B, Dandey, V.P, Wei, H, Brunton, R, Raczkowski, A.M, Athayde, D, Catalao, M.J, Pimentel, M, Clarke, O.B, Lowary, T.L, Archer, M, Niederweis, M, Potter, C.S, Carragher, B, Mancia, F.
登録日2020-03-27
公開日2020-05-13
最終更新日2020-06-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM Structures and Regulation of Arabinofuranosyltransferase AftD from Mycobacteria.
Mol.Cell, 78, 2020
7JVM
DownloadVisualize
BU of 7jvm by Molmil
Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitor TNO155
分子名称: (3S,4S)-8-{6-amino-5-[(2-amino-3-chloropyridin-4-yl)sulfanyl]pyrazin-2-yl}-3-methyl-2-oxa-8-azaspiro[4.5]decan-4-amine, PHOSPHATE ION, Tyrosine-protein phosphatase non-receptor type 11
著者Fodor, M, Stams, T.
登録日2020-08-21
公開日2020-09-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.166 Å)
主引用文献Identification of TNO155, an Allosteric SHP2 Inhibitor for the Treatment of Cancer.
J.Med.Chem., 63, 2020
4NMH
DownloadVisualize
BU of 4nmh by Molmil
11-beta-HSD1 in complex with a 3,3-Di-methyl-azetidin-2-one
分子名称: (4S)-4-(2-methoxyphenyl)-3,3-dimethyl-1-[3-(methylsulfonyl)phenyl]azetidin-2-one, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者McCoull, W, Augustin, M, Blake, C, Ertan, A, Kilgour, E.K, Krapp, S, Moore, J.E, Newcombe, N.J, Packer, M.J, Rees, A, Revill, J, Scott, J.S, Selmi, N, Gerhardt, S, Ogg, D.J, Steinbacher, S, Whittamore, P.R.O.
登録日2013-11-15
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Identification and optimisation of 3,3-dimethyl-azetidin-2-ones as potent and selective inhibitors of 11 beta-hydroxysteroid dehydrogenase type 1 (11-beta-HSD1)
TO BE PUBLISHED
4NO8
DownloadVisualize
BU of 4no8 by Molmil
yCP in complex with Z-Leu-Leu-Leu-ketoamide
分子名称: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-2-hydroxy-5-methyl-1-oxo-1-(phenylamino)hexan-3-yl]-L-leucinamide, Probable proteasome subunit alpha type-7, ...
著者Stein, M.L, Cui, H, Beck, P, Dubiella, C, Voss, C, Krueger, A, Schmidt, B, Groll, M.
登録日2013-11-19
公開日2014-02-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Systematic Comparison of Peptidic Proteasome Inhibitors Highlights the alpha-Ketoamide Electrophile as an Auspicious Reversible Lead Motif.
Angew.Chem.Int.Ed.Engl., 53, 2014
4NMY
DownloadVisualize
BU of 4nmy by Molmil
Crystal Structure of the Thiamin-bound form of Substrate-binding Protein of ABC Transporter from Clostridium difficile
分子名称: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, ABC-type transport system, extracellular solute-binding protein
著者Kim, Y, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-11-15
公開日2013-12-04
実験手法X-RAY DIFFRACTION (1.896 Å)
主引用文献Crystal Structure of the Thiamin-bound form of Substrate-binding Protein of ABC Transporter from Clostridium difficile
To be Published
6WBY
DownloadVisualize
BU of 6wby by Molmil
Single-Particle Cryo-EM Structure of Arabinofuranosyltransferase AftD from Mycobacteria, Mutant R1389S Class 2
分子名称: CALCIUM ION, DUF3367 domain-containing protein
著者Tan, Y.Z, Zhang, L, Rodrigues, J, Zheng, R.B, Giacometti, S.I, Rosario, A.L, Kloss, B, Dandey, V.P, Wei, H, Brunton, R, Raczkowski, A.M, Athayde, D, Catalao, M.J, Pimentel, M, Clarke, O.B, Lowary, T.L, Archer, M, Niederweis, M, Potter, C.S, Carragher, B, Mancia, F.
登録日2020-03-27
公開日2020-05-13
最終更新日2020-06-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM Structures and Regulation of Arabinofuranosyltransferase AftD from Mycobacteria.
Mol.Cell, 78, 2020
4NVB
DownloadVisualize
BU of 4nvb by Molmil
Predicting protein conformational response in prospective ligand discovery.
分子名称: 2-AMINO-5-METHYLTHIAZOLE, Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Fischer, M, Fraser, J.S.
登録日2013-12-05
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery.
Nat Chem, 6, 2014
4NVM
DownloadVisualize
BU of 4nvm by Molmil
Predicting protein conformational response in prospective ligand discovery
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-(1H-benzimidazol-1-yl)propanamide, Cytochrome c peroxidase, ...
著者Fischer, M, Fraser, J.S.
登録日2013-12-05
公開日2013-12-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery.
Nat Chem, 6, 2014
4O0O
DownloadVisualize
BU of 4o0o by Molmil
Crystal structure of the complex of type 1 Ribosome inactivating protein from Momordica balsamina with 5-fluorouracil at 2.59 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-FLUOROURACIL, GLYCEROL, ...
著者Yamini, S, Pandey, S, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2013-12-14
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal structure of the complex of type 1 Ribosome inactivating protein from Momordica balsamina with 5-fluorouracil at 2.59 A resolution
To be Published
4NZP
DownloadVisualize
BU of 4nzp by Molmil
The crystal structure of argininosuccinate synthase from Campylobacter jejuni subsp. jejuni NCTC 11168
分子名称: Argininosuccinate synthase
著者Tan, K, Gu, M, Zhang, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-12-12
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.307 Å)
主引用文献The crystal structure of argininosuccinate synthase from Campylobacter jejuni subsp. jejuni NCTC 11168
To be Published
4O0M
DownloadVisualize
BU of 4o0m by Molmil
Crystal structure of T. Elongatus BP-1 Clock Protein KaiC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M.
登録日2013-12-13
公開日2014-05-14
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献An arginine tetrad as mediator of input-dependent and input-independent ATPases in the clock protein KaiC
Acta Crystallogr.,Sect.D, D70, 2014
1L9D
DownloadVisualize
BU of 1l9d by Molmil
Role of Histidine 269 in Catalysis by Monomeric Sarcosine Oxidase
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase, ...
著者Zhao, G, Song, H, Chen, Z.-w, Mathews, F.S, Jorns, M.S.
登録日2002-03-22
公開日2002-08-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
4NBY
DownloadVisualize
BU of 4nby by Molmil
Crystal Structure of TcdA-A2 Bound to Two Molecules of A20.1 VHH
分子名称: A20.1 VHH, Cell wall-binding repeat protein
著者Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E, Klassen, J.S, Ng, K.K.S.
登録日2013-10-23
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
4NC7
DownloadVisualize
BU of 4nc7 by Molmil
N-terminal domain of delta-subunit of RNA polymerase complexed with I3C and nickel ions
分子名称: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, DNA-directed RNA polymerase subunit delta, NICKEL (II) ION
著者Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M.
登録日2013-10-24
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase.
J.Struct.Biol., 187, 2014
4NCZ
DownloadVisualize
BU of 4ncz by Molmil
Spermidine N-acetyltransferase from Vibrio cholerae in complex with 2-[n-cyclohexylamino]ethane sulfonate.
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, SODIUM ION, ...
著者Osipiuk, J, Zhou, M, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-10-25
公開日2013-11-06
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure.
J.Mol.Biol., 427, 2015
4NE4
DownloadVisualize
BU of 4ne4 by Molmil
Crystal structure of ABC transporter substrate binding protein ProX from Agrobacterium tumefaciens cocrystalized with BTB
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ABC transporter, substrate binding protein (Proline/glycine/betaine), ...
著者Tkaczuk, K.L, Nicholls, R, Kagan, O, Chruszcz, M, Domagalski, M.J, Savchenko, A, Joachimiak, A, Murshudov, G, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2013-10-28
公開日2013-11-27
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structure of ABC transporter substrate binding protein ProX from Agrobacterium tumefaciens cocrystalized with BTB
To be Published
4NEG
DownloadVisualize
BU of 4neg by Molmil
The crystal structure of tryptophan synthase subunit beta from Bacillus anthracis str. 'Ames Ancestor'
分子名称: FORMIC ACID, GLYCEROL, SULFATE ION, ...
著者Tan, K, Zhang, R, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-10-29
公開日2013-11-13
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献The crystal structure of tryptophan synthase subunit beta from Bacillus anthracis str. 'Ames Ancestor'
To be Published
4NF9
DownloadVisualize
BU of 4nf9 by Molmil
Structure of the Knl1/Nsl1 complex
分子名称: CHLORIDE ION, Kinetochore-associated protein NSL1 homolog, Protein CASC5
著者Petrovic, A, Mosalaganti, S, Keller, J, Mattiuzzo, M, Overlack, K, Wohlgemuth, S, Pasqualato, S, Raunser, S, Musacchio, A.
登録日2013-10-31
公開日2014-03-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Modular Assembly of RWD Domains on the Mis12 Complex Underlies Outer Kinetochore Organization.
Mol.Cell, 53, 2014
4NEN
DownloadVisualize
BU of 4nen by Molmil
An internal ligand-bound, metastable state of a leukocyte integrin, aXb2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Sen, M, Yuki, K, Springer, T.A.
登録日2013-10-29
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9012 Å)
主引用文献An internal ligand-bound, metastable state of a leukocyte integrin, alpha X beta 2.
J.Cell Biol., 203, 2013

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon