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PDB: 51630 件
7VKY
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The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with sophorose
分子名称: CALCIUM ION, beta-1,2-glucosyltransferase, beta-D-glucopyranose-(1-2)-alpha-D-glucopyranose, ...
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VL6
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The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with arbutin
分子名称: (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-(4-oxidanylphenoxy)oxane-3,4,5-triol, CALCIUM ION, beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VKZ
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The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with 1-Deoxynojirimycin
分子名称: 1-DEOXYNOJIRIMYCIN, CALCIUM ION, beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VL3
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The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with phenyl alpha-D-glucoside
分子名称: (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-phenoxy-oxane-3,4,5-triol, CALCIUM ION, beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
3E6Y
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Structure of 14-3-3 in complex with the differentiation-inducing agent Cotylenin A
分子名称: 14-3-3-like protein C, CHLORIDE ION, Cotylenin A, ...
著者Ottmann, C, Weyand, M, Wittinghofer, A, Oecking, C.
登録日2008-08-17
公開日2009-03-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A structural rationale for selective stabilization of anti-tumor interactions of 14-3-3 proteins by cotylenin A
J.Mol.Biol., 386, 2009
3EKQ
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Crystal structure of inhibitor saquinavir (SQV) in complex with multi-drug resistant HIV-1 protease (L63P/V82T/I84V) (referred to as ACT in paper)
分子名称: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, PHOSPHATE ION, Protease
著者Prabu-Jeyabalan, M, King, N.M, Schiffer, C.A, Nalivaika, E.
登録日2008-09-19
公開日2009-09-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Extreme Entropy-Enthalpy Compensation in a Drug-Resistant Variant of HIV-1 Protease.
Acs Chem.Biol., 7, 2012
7VL0
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The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with p-nitrophenyl-alpha-D-glucopyranoside
分子名称: 4-nitrophenyl alpha-D-glucopyranoside, Beta-galactosidase, CALCIUM ION
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
3E7N
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Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2
分子名称: 1,2-ETHANEDIOL, D-ribose high-affinity transport system
著者Nocek, B, Maltseva, N, Gu, M, Joachimiak, A, Anderson, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2008-08-18
公開日2008-08-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2
To be Published
3ELI
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Crystal structure of the AHSA1 (SPO3351) protein from Silicibacter pomeroyi, Northeast Structural Genomics Consortium Target SiR160
分子名称: Aha1 domain protein
著者Forouhar, F, Su, M, Seetharaman, J, Janjua, H, Xiao, R, Ciccosanti, C, Foote, E.L, Wang, D, Tong, S, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-09-22
公開日2008-09-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the AHSA1 (SPO3351) protein from Silicibacter pomeroyi, Northeast Structural Genomics Consortium Target SiR160
To be Published
3EM6
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Crystal structure of I50L/A71V mutant of hiv-1 protease in complex with inhibitor darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETATE ION, PHOSPHATE ION, ...
著者Royer, C.J, King, N.M, Prabu-Jeyabalan, M, Ng, C, Nalivaika, E.A, Schiffer, C.A.
登録日2008-09-23
公開日2009-09-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Kinetic and structural studies on atazanavir specific I50L drug-resistant HIV-1 protease mutant.
To be Published
3E4B
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Crystal structure of AlgK from Pseudomonas fluorescens WCS374r
分子名称: AlgK, CHLORIDE ION, GLYCEROL
著者Keiski, C.-L, Harwich, M, Jain, S, Neculai, A.M, Yip, P, Robinson, H, Whitney, J.C, Burrows, L.L, Ohman, D.E, Howell, P.L.
登録日2008-08-11
公開日2009-08-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献AlgK is a TPR-containing protein and the periplasmic component of a novel exopolysaccharide secretin.
Structure, 18, 2010
7VEW
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Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in complex with unsaturated trigalacturonic acid
分子名称: 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Anamizu, K, Takase, R, Hio, M, Watanebe, D, Mikami, B, Hashimoto, W.
登録日2021-09-10
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Substrate size-dependent conformational changes of bacterial pectin-binding protein crucial for chemotaxis and assimilation.
Sci Rep, 12, 2022
7VEQ
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Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in an open conformation
分子名称: GLYCEROL, SPH1118
著者Anamizu, K, Takase, R, Hio, M, Watanebe, D, Mikami, B, Hashimoto, W.
登録日2021-09-10
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献Substrate size-dependent conformational changes of bacterial pectin-binding protein crucial for chemotaxis and assimilation.
Sci Rep, 12, 2022
3E7L
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Crystal structure of sigma54 activator NtrC4's DNA binding domain
分子名称: Transcriptional regulator (NtrC family), ZINC ION
著者Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E.
登録日2008-08-18
公開日2008-11-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.252 Å)
主引用文献Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
7VEV
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Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in complex with MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, SPH1118
著者Anamizu, K, Takase, R, Hio, M, Watanebe, D, Mikami, B, Hashimoto, W.
登録日2021-09-10
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Substrate size-dependent conformational changes of bacterial pectin-binding protein crucial for chemotaxis and assimilation.
Sci Rep, 12, 2022
7VET
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Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in a closed conformation
分子名称: SPH1118
著者Anamizu, K, Takase, R, Hio, M, Watanebe, D, Mikami, B, Hashimoto, W.
登録日2021-09-10
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Substrate size-dependent conformational changes of bacterial pectin-binding protein crucial for chemotaxis and assimilation.
Sci Rep, 12, 2022
3ELL
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BU of 3ell by Molmil
Structure of the hemophore from Pseudomonas aeruginosa (HasAp)
分子名称: HasAp (Heme acquisition protein HasAp), PROTOPORPHYRIN IX CONTAINING FE
著者Schonbrunn, E, Rivera, M.
登録日2008-09-22
公開日2009-01-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of the hemophore HasAp from Pseudomonas aeruginosa: NMR spectroscopy reveals protein-protein interactions between Holo-HasAp and hemoglobin.
Biochemistry, 48, 2009
3EOX
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BU of 3eox by Molmil
High quality structure of cleaved PAI-1-stab
分子名称: Plasminogen activator inhibitor 1
著者Dewilde, M, Declerck, P.J, Rabijns, A, Strelkov, S.V.
登録日2008-09-29
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献High quality structure of cleaved PAI-1-stab.
J.Struct.Biol., 165, 2009
7VER
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Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in a full open conformation
分子名称: GLYCEROL, SPH1118
著者Anamizu, K, Takase, R, Hio, M, Watanebe, D, Mikami, B, Hashimoto, W.
登録日2021-09-10
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Substrate size-dependent conformational changes of bacterial pectin-binding protein crucial for chemotaxis and assimilation.
Sci Rep, 12, 2022
3EPM
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BU of 3epm by Molmil
Crystal structure of Caulobacter crescentus ThiC
分子名称: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, SULFATE ION, Thiamine biosynthesis protein thiC, ...
著者Li, S, Chatterjee, A, Zhang, Y, Grove, T.L, Lee, M, Krebs, C, Booker, S.J, Begley, T.P, Ealick, S.E.
登録日2008-09-29
公開日2008-10-28
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.793 Å)
主引用文献Reconstitution of ThiC in thiamine pyrimidine biosynthesis expands the radical SAM superfamily
Nat.Chem.Biol., 4, 2008
7VEU
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Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in complex with galacturonic acid
分子名称: GLYCEROL, SPH1118, alpha-D-galactopyranuronic acid
著者Anamizu, K, Takase, R, Hio, M, Watanebe, D, Mikami, B, Hashimoto, W.
登録日2021-09-10
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.736 Å)
主引用文献Substrate size-dependent conformational changes of bacterial pectin-binding protein crucial for chemotaxis and assimilation.
Sci Rep, 12, 2022
3EEQ
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Crystal structure of a putative cobalamin biosynthesis protein G homolog from Sulfolobus solfataricus
分子名称: SULFATE ION, putative Cobalamin biosynthesis protein G homolog
著者Bonanno, J.B, Gilmore, M, Bain, K.T, Chang, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-09-05
公開日2008-09-30
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a putative cobalamin biosynthesis protein G homolog from Sulfolobus solfataricus
To be Published
7VN8
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Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning GTCACGTGAC
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*GP*TP*CP*AP*CP*GP*TP*GP*AP*CP*AP*AP*A)-3'), Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1, ...
著者Nosaki, S, Tanokura, M, Miyakawa, T.
登録日2021-10-10
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Brassinosteroid-induced gene repression requires specific and tight promoter binding of BIL1/BZR1 via DNA shape readout.
Nat.Plants, 8, 2022
7VN7
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Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning GACACGTGTC
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*GP*AP*CP*AP*CP*GP*TP*GP*TP*CP*AP*AP*A)-3'), Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1, ...
著者Nosaki, S, Tanokura, M, Miyakawa, T.
登録日2021-10-10
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Brassinosteroid-induced gene repression requires specific and tight promoter binding of BIL1/BZR1 via DNA shape readout.
Nat.Plants, 8, 2022
3EC5
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The crystal structure of Thioflavin-T (ThT) binding OspA mutant
分子名称: Outer Surface Protein A, TETRAETHYLENE GLYCOL
著者Biancalana, M, Makabe, K, Koide, A, Koide, S.
登録日2008-08-28
公開日2009-02-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular mechanism of thioflavin-T binding to the surface of beta-rich peptide self-assemblies
J.Mol.Biol., 385, 2009

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