Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 件

3BCG
DownloadVisualize
BU of 3bcg by Molmil
Conformational changes of the AcrR regulator reveal a mechanism of induction
分子名称: HTH-type transcriptional regulator acrR
著者Gu, R, Li, M, Su, C.C, Long, F, Yang, F, McDermott, G, Yu, E.Y.
登録日2007-11-12
公開日2008-02-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Conformational change of the AcrR regulator reveals a possible mechanism of induction.
Acta Crystallogr.,Sect.F, 64, 2008
7XPE
DownloadVisualize
BU of 7xpe by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 8.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7X81
DownloadVisualize
BU of 7x81 by Molmil
The crystal structure of PloI4-C16M/D46A/I137V in complex with exo-2+2 adduct
分子名称: (4S,4aS,6aR,8R,9R,11E,12aR,14aS,17E,18aR,18bR)-9-ethyl-4,8,19-trihydroxy-11,12a,13,18a-tetramethyl-2,3,4,4a,6a,7,8,9,10,12a,13,14,18a,18b-tetradecahydro-14a,17-(metheno)cyclobuta[b]naphtho[2,1-j][1]azacyclotetradecine-16,18(1H,15H)-dione, PloI4
著者Li, M, Pan, L.F.
登録日2022-03-10
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
3BFK
DownloadVisualize
BU of 3bfk by Molmil
Crystal structure of Plasmodium falciparum Rab11a in complex with GDP
分子名称: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, Small GTPase Rab11
著者Pizarro, J.C, Sukumar, D, Hassanali, A, Lin, L, Wernimont, A.K, Lew, J, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2007-11-21
公開日2007-12-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Plasmodium falciparum Rab11a in complex with GDP.
To be Published
7XGZ
DownloadVisualize
BU of 7xgz by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-04-07
公開日2023-02-08
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions
Nat Commun, 14, 2023
7XPA
DownloadVisualize
BU of 7xpa by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPD
DownloadVisualize
BU of 7xpd by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPF
DownloadVisualize
BU of 7xpf by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 8.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPB
DownloadVisualize
BU of 7xpb by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPG
DownloadVisualize
BU of 7xpg by Molmil
Cryo-EM structure of the T=3 lake sinai virus 1 (delta-N48) virus-like capsid at pH 6.5
分子名称: Capsid protein alpha, RNA (5'-R(P*UP*G)-3')
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XHR
DownloadVisualize
BU of 7xhr by Molmil
Crystal structure of Wild Type Cypovirus Polyhedra produced by cell-free protein synthesis
分子名称: ACETYL GROUP, CHLORIDE ION, Polyhedrin
著者Abe, S, Tanaka, J, Kojima, M, Hirata, K, Yamashita, K, Ueno, T.
登録日2022-04-10
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Cell-free protein crystallization for nanocrystal structure determination.
Sci Rep, 12, 2022
7X80
DownloadVisualize
BU of 7x80 by Molmil
The crystal structure of PloI4-C16M/D46A/I137V
分子名称: GLYCEROL, PloI4
著者Li, M, Pan, L.F.
登録日2022-03-10
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
3BEZ
DownloadVisualize
BU of 3bez by Molmil
Crystal structure of Escherichia coli Signal peptide peptidase (SppA), SeMet crystals
分子名称: Protease 4
著者Paetzel, M.
登録日2007-11-20
公開日2007-12-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Crystal structure of a bacterial signal Peptide peptidase.
J.Mol.Biol., 376, 2008
7X86
DownloadVisualize
BU of 7x86 by Molmil
The crystal structure of PloI4-F124L in complex with endo-4+2 adduct
分子名称: (4S,4aS,6aR,8R,9R,10aS,13S,14aS,18aR,18bR,E)-9-ethyl-4,8,19-trihydroxy-10a,12,13,18a-tetramethyl-2,3,4,4a,6a,7,8,9,10,10a,13,14,18a,18b-tetradecahydro-14a,17-(metheno)benzo[b]naphtho[2,1-h][1]azacyclododecine-16,18(1H,15H)-dione, PloI4
著者Li, M, Pan, L.F.
登録日2022-03-11
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
7X7Z
DownloadVisualize
BU of 7x7z by Molmil
The crystal structure of 2+2/4+2 cyclase PloI4
分子名称: PloI4
著者Li, M, Pan, L.F.
登録日2022-03-10
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
7XH2
DownloadVisualize
BU of 7xh2 by Molmil
Dihydrofolate Reductase-like Protein SacH in safracin biosynthesis
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Uncharacterized protein sfcH
著者Ma, X, Shao, N, Ma, M, Tang, G.
登録日2022-04-07
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Dihydrofolate reductase-like protein inactivates hemiaminal pharmacophore for self-resistance in safracin biosynthesis.
Acta Pharm Sin B, 13, 2023
7WWY
DownloadVisualize
BU of 7wwy by Molmil
M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Narikiyo, S, Furukawa, Y, Akutsu, M.
登録日2022-02-14
公開日2023-02-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
3B1W
DownloadVisualize
BU of 3b1w by Molmil
Crystal structure of an S. thermophilus NFeoB E67A mutant bound to GDP
分子名称: Ferrous iron uptake transporter protein B, GUANOSINE-5'-DIPHOSPHATE
著者Ash, M.R, Maher, M.J, Guss, J.M, Jormakka, M.
登録日2011-07-15
公開日2011-11-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A suite of Switch I and Switch II mutant structures from the G-protein domain of FeoB
Acta Crystallogr.,Sect.D, 67, 2011
7WWT
DownloadVisualize
BU of 7wwt by Molmil
Cu/Zn-superoxide dismutase from dog (Canis familiaris)
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Narikiyo, S, Furukawa, Y, Akutsu, M.
登録日2022-02-14
公開日2023-02-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
7WX0
DownloadVisualize
BU of 7wx0 by Molmil
E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Narikiyo, S, Furukawa, Y, Akutsu, M.
登録日2022-02-14
公開日2023-02-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
3AYJ
DownloadVisualize
BU of 3ayj by Molmil
X-ray crystal structures of L-phenylalanine oxidase (deaminating and decaboxylating) from Pseudomonas sp. P501. Structures of the enzyme-ligand complex and catalytic mechanism
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, PHENYLALANINE, ...
著者Ida, K, Suguro, M, Suzuki, H.
登録日2011-05-07
公開日2011-08-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High resolution X-ray crystal structures of L-phenylalanine oxidase (deaminating and decarboxylating) from Pseudomonas sp. P-501. Structures of the enzyme-ligand complex and catalytic mechanism
J.Biochem., 150, 2011
3B7U
DownloadVisualize
BU of 3b7u by Molmil
Leukotriene A4 Hydrolase Complexed with KELatorphan
分子名称: ACETIC ACID, IMIDAZOLE, Leukotriene A-4 hydrolase, ...
著者Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
登録日2007-10-31
公開日2008-09-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008
7WX1
DownloadVisualize
BU of 7wx1 by Molmil
E40K/M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Narikiyo, S, Furukawa, Y, Akutsu, M.
登録日2022-02-14
公開日2023-02-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
6MT2
DownloadVisualize
BU of 6mt2 by Molmil
Crystal structure of Inorganic Pyrophosphatase from Medicago truncatula (I23 crystal form)
分子名称: Soluble inorganic pyrophosphatase
著者Ruszkowski, M, Grzechowiak, M, Dauter, Z.
登録日2018-10-18
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Crystal structures of plant inorganic pyrophosphatase, an enzyme with a moonlighting autoproteolytic activity.
Biochem.J., 476, 2019
7XH4
DownloadVisualize
BU of 7xh4 by Molmil
Dihydrofolate Reductase-like Protein SacH in safracin biosynthesis complex with safracin A
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Safracin A, Uncharacterized protein sfcH
著者Ma, X, Shao, N, Zhang, Y, Yang, D, Ma, M, Tang, G.
登録日2022-04-07
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Dihydrofolate reductase-like protein inactivates hemiaminal pharmacophore for self-resistance in safracin biosynthesis.
Acta Pharm Sin B, 13, 2023

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon