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PDB: 51630 results

4P7L
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Structure of Escherichia coli PgaB C-terminal domain, P212121 crystal form
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase
Authors:Little, D.J, Li, G, Ing, C, DiFrancesco, B, Bamford, N.C, Robinson, H, Nitz, M, Pomes, R, Howell, P.L.
Deposit date:2014-03-27
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Modification and periplasmic translocation of the biofilm exopolysaccharide poly-beta-1,6-N-acetyl-D-glucosamine.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PKM
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Crystal Structure of Bacillus thuringiensis Cry51Aa1 Protoxin at 1.65 Angstroms Resolution
Descriptor: Cry51Aa1, GLYCEROL, GLYCINE, ...
Authors:Xu, C, Chinte, U, Chen, L, Yao, Q, Zhou, D, Meng, Y, Li, L, Rose, J, Bi, L.J, Yu, Z, Sun, M, Wang, B.C.
Deposit date:2014-05-15
Release date:2015-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Cry51Aa1: A potential novel insecticidal aerolysin-type beta-pore-forming toxin from Bacillus thuringiensis.
Biochem.Biophys.Res.Commun., 462, 2015
4PJ2
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Crystal structure of Aeromonas hydrophila PliI in complex with Meretrix lusoria lysozyme
Descriptor: GLYCEROL, Lysozyme, MAGNESIUM ION, ...
Authors:Leysen, S, Van Herreweghe, J.M, Yoneda, K, Ogata, M, Usui, T, Michiels, C.W, Araki, T, Strelkov, S.V.
Deposit date:2014-05-10
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The structure of the proteinaceous inhibitor PliI from Aeromonas hydrophila in complex with its target lysozyme.
Acta Crystallogr.,Sect.D, 71, 2015
4PJV
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Structure of PARP2 catalytic domain bound to inhibitor BMN 673
Descriptor: (8S,9R)-5-fluoro-8-(4-fluorophenyl)-9-(1-methyl-1H-1,2,4-triazol-5-yl)-2,7,8,9-tetrahydro-3H-pyrido[4,3,2-de]phthalazin-3-one, GLYCEROL, Poly [ADP-ribose] polymerase 2
Authors:Aoyagi-Scharber, M, Gardberg, A.S, Edwards, T.L.
Deposit date:2014-05-12
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the inhibition of poly(ADP-ribose) polymerases 1 and 2 by BMN 673, a potent inhibitor derived from dihydropyridophthalazinone.
Acta Crystallogr.,Sect.F, 70, 2014
4PNF
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Glutathione S-Transferase from Drosophila melanogaster - isozyme E6
Descriptor: GLUTATHIONE, RE21095p
Authors:Scian, M, Le Trong, I, Mannervik, B, Atkins, W.M, Stenkamp, R.E.
Deposit date:2014-05-23
Release date:2015-05-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Comparison of epsilon- and delta-class glutathione S-transferases: the crystal structures of the glutathione S-transferases DmGSTE6 and DmGSTE7 from Drosophila melanogaster.
Acta Crystallogr.,Sect.D, 71, 2015
4PNC
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BU of 4pnc by Molmil
E. COLI METHIONINE AMINOPEPTIDASE IN COMPLEX WITH INHIBITOR 7-METHOXY-2-METHYLEN-3,4-DIHYDRONAPHTHALEN-1(2H)-ONE
Descriptor: (2S)-7-methoxy-2-methyl-3,4-dihydronaphthalen-1(2H)-one, COBALT (II) ION, Methionine aminopeptidase, ...
Authors:Scheidig, A.J, Altmeyer, M, Klein, C.D.
Deposit date:2014-05-23
Release date:2014-07-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Beta-aminoketones as prodrugs for selective irreversible inhibitors of type-1 methionine aminopeptidases.
Bioorg.Med.Chem.Lett., 24, 2014
4PPK
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Crystal structure of eCGP123 T69V variant at pH 7.5
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015
6MTY
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Crystal structure of a human anti-ZIKV-DENV neutralizing antibody MZ4 isolated following ZPIV vaccination
Descriptor: MZ4 Heavy Chain, MZ4 Light Chain
Authors:Sankhala, R.S, Dussupt, V, Donofrio, G, Choe, M, Modjarrad, K, Michael, N.L, Krebs, S.J, Joyce, M.G.
Deposit date:2018-10-22
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.951 Å)
Cite:Potent Zika and dengue cross-neutralizing antibodies induced by Zika vaccination in a dengue-experienced donor.
Nat Med, 26, 2020
4PA5
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BU of 4pa5 by Molmil
Tgl - a bacterial spore coat transglutaminase - cystamine complex
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-ETHANETHIOL, CITRATE ANION, ...
Authors:Brito, J.A, Placido, D, Fernandes, C.G, Lousa, D, Isidro, A, Soares, C.M, Pohl, J, Carrondo, M.A, Henriques, A.O, Archer, M.
Deposit date:2014-04-07
Release date:2015-09-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural and Functional Characterization of an Ancient Bacterial Transglutaminase Sheds Light on the Minimal Requirements for Protein Cross-Linking.
Biochemistry, 54, 2015
4P8S
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Crystal structure of Nogo-receptor-2
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Semavina, M, Saha, N, Kolev, M.V, Giger, R.J, Himanen, J.P, Nikolov, D.B.
Deposit date:2014-04-01
Release date:2014-04-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Nogo-receptor-2.
Protein Sci., 2011
4PB3
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D-threo-3-hydroxyaspartate dehydratase H351A mutant
Descriptor: D-threo-3-hydroxyaspartate dehydratase, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Yasutake, Y, Matsumoto, Y, Wada, M.
Deposit date:2014-04-11
Release date:2015-03-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate.
Appl.Microbiol.Biotechnol., 99, 2015
4PE6
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BU of 4pe6 by Molmil
Crystal structure of ABC transporter solute binding protein from Thermobispora bispora DSM 43833
Descriptor: (2R,3S)-2,3,4-trihydroxybutanoic acid, Putative ABC transporter
Authors:Chang, C, Li, H, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-22
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of ABC transporter solute binding protein from Thermobispora bispora DSM 43833
to be published
8AO1
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BU of 8ao1 by Molmil
solution structure of nanoFAST fluorogen-activating protein in the apo state
Descriptor: nanoFAST
Authors:Lushpa, V.A, Goncharuk, M.V, Goncharuk, S.A, Baranov, M.S, Mineev, K.S.
Deposit date:2022-08-08
Release date:2022-11-23
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Spatial Structure of NanoFAST in the Apo State and in Complex with its Fluorogen HBR-DOM2.
Int J Mol Sci, 23, 2022
8AO0
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BU of 8ao0 by Molmil
Solution structure of nanoFAST/HBR-DOM2 complex
Descriptor: (5~{Z})-5-[(2,5-dimethoxy-4-oxidanyl-phenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one, Photoactive yellow protein
Authors:Lushpa, V.A, Goncharuk, M.V, Goncharuk, S.A, Baleeva, N.S, Baranov, M.S, Mineev, K.S.
Deposit date:2022-08-08
Release date:2022-11-23
Method:SOLUTION NMR
Cite:Spatial Structure of NanoFAST in the Apo State and in Complex with its Fluorogen HBR-DOM2.
Int J Mol Sci, 23, 2022
1NZM
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BU of 1nzm by Molmil
NMR structure of the parallel-stranded DNA quadruplex d(TTAGGGT)4 complexed with the telomerase inhibitor RHPS4
Descriptor: 3,11-DIFLUORO-6,8,13-TRIMETHYL-8H-QUINO[4,3,2-KL]ACRIDIN-13-IUM, 5'-D(*TP*TP*AP*GP*GP*GP*T)-3', POTASSIUM ION
Authors:Gavathiotis, E, Heald, R.A, Stevens, M.F.G, Searle, M.S.
Deposit date:2003-02-18
Release date:2003-11-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Drug Recognition and Stabilisation of the Parallel-stranded DNA Quadruplex d(TTAGGGT)4 Containing the Human Telomeric Repeat
J.Mol.Biol., 334, 2003
4PSU
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Crystal structure of alpha/beta hydrolase from Rhodopseudomonas palustris CGA009
Descriptor: Alpha/beta hydrolase, DODECAETHYLENE GLYCOL
Authors:Nocek, B, Hajighasemi, M, Xu, X, Cui, H, Savchenko, A, Yakunin, A.
Deposit date:2014-03-07
Release date:2015-03-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of alpha/beta hydrolase from Rhodopseudomonas palustris CGA009
TO BE PUBLISHED
6MST
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BU of 6mst by Molmil
Cryo-EM structure of human AA amyloid fibril
Descriptor: Serum amyloid A-1 protein
Authors:Loerch, S, Rennegarbe, M, Liberta, F, Grigorieff, N, Fandrich, M, Schmidt, M.
Deposit date:2018-10-18
Release date:2019-03-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM fibril structures from systemic AA amyloidosis reveal the species complementarity of pathological amyloids.
Nat Commun, 10, 2019
4P7I
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BU of 4p7i by Molmil
Crystal structure of the Merlin FERM/DCAF1 complex
Descriptor: GLYCEROL, Merlin, Protein VPRBP
Authors:Wei, Z, Li, Y, Zhang, M.
Deposit date:2014-03-27
Release date:2014-04-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of the binding of Merlin FERM domain to the E3 ubiquitin ligase substrate adaptor DCAF1.
J.Biol.Chem., 289, 2014
4P7W
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BU of 4p7w by Molmil
L-proline-bound L-proline cis-4-hydroxylase
Descriptor: 2-OXOGLUTARIC ACID, COBALT (II) ION, L-proline cis-4-hydroxylase, ...
Authors:Shomura, Y, Koketsu, K, Moriwaki, K, Hayashi, M, Mitsuhashi, S, Hara, R, Kino, K, Higuchi, Y.
Deposit date:2014-03-28
Release date:2014-09-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Refined Regio- and Stereoselective Hydroxylation of l-Pipecolic Acid by Protein Engineering of l-Proline cis-4-Hydroxylase Based on the X-ray Crystal Structure.
Acs Synth Biol, 4, 2015
3UWO
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BU of 3uwo by Molmil
Structure Guided Development of Novel Thymidine Mimetics targeting Pseudomonas aeruginosa Thymidylate Kinase: from Hit to Lead Generation
Descriptor: 3-(1-methyl-2-oxo-2,3-dihydro-1H-imidazo[4,5-b]pyridin-6-yl)benzamide, Thymidylate kinase
Authors:Choi, J.Y, Plummer, M.S, Starr, J, Desbonnet, C.R, Soutter, H.H, Chang, J, Miller, J.R, Dillman, K, Miller, A.A, Roush, W.R.
Deposit date:2011-12-02
Release date:2012-02-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure guided development of novel thymidine mimetics targeting Pseudomonas aeruginosa thymidylate kinase: from hit to lead generation.
J.Med.Chem., 55, 2012
4PAG
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BU of 4pag by Molmil
ABC transporter solute binding protein from Sulfurospirillum deleyianum DSM 6946
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, HISTIDINE, ...
Authors:Chang, C, Endres, M, Li, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-08
Release date:2014-04-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Crystal structure of ABC transporter solute binding protein from Sulfurospirillum deleyianum DSM 6946
To Be Published
4PB4
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BU of 4pb4 by Molmil
D-threo-3-hydroxyaspartate dehydratase H351A mutant complexed with 2-amino maleic acid
Descriptor: 2-amino maleic acid, D-threo-3-hydroxyaspartate dehydratase, MAGNESIUM ION, ...
Authors:Yasutake, Y, Matsumoto, Y, Wada, M.
Deposit date:2014-04-11
Release date:2015-03-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate.
Appl.Microbiol.Biotechnol., 99, 2015
4PJT
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BU of 4pjt by Molmil
Structure of PARP1 catalytic domain bound to inhibitor BMN 673
Descriptor: (8S,9R)-5-fluoro-8-(4-fluorophenyl)-9-(1-methyl-1H-1,2,4-triazol-5-yl)-2,7,8,9-tetrahydro-3H-pyrido[4,3,2-de]phthalazin-3-one, GLYCEROL, Poly [ADP-ribose] polymerase 1, ...
Authors:Aoyagi-Scharber, M, Gardberg, A.S, Arakaki, T.L.
Deposit date:2014-05-12
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for the inhibition of poly(ADP-ribose) polymerases 1 and 2 by BMN 673, a potent inhibitor derived from dihydropyridophthalazinone.
Acta Crystallogr.,Sect.F, 70, 2014
4P4L
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Crystal Structure of Mycobacterium tuberculosis Shikimate Dehydrogenase
Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, SULFATE ION, Shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase)
Authors:Lalgondar, M, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2014-03-12
Release date:2015-03-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.009 Å)
Cite:Structure of Mycobacterium tuberculosis Shikimate Dehydrogenase
To Be Published
4PMO
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Crystal structure of the Mycobacterium tuberculosis Tat-secreted protein Rv2525c, monoclinic crystal form I
Descriptor: FORMIC ACID, GLYCEROL, SODIUM ION, ...
Authors:Bellinzoni, M, Haouz, A, Shepard, W, Alzari, P.M.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural studies suggest a peptidoglycan hydrolase function for the Mycobacterium tuberculosis Tat-secreted protein Rv2525c.
J.Struct.Biol., 188, 2014

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