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PDB: 379 results

8JWI
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Cryo-EM structure of the outward-facing Plasmodium falciparum multidrug resistance protein 1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-29
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JWF
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Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 with H1 helix in complex with MFQ
Descriptor: Mefloquine, Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-29
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JVH
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Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 in the apo state with H1 helix
Descriptor: Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-28
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
4EXH
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The crystal structure of xmrv protease complexed with acetyl-pepstatin
Descriptor: ACETYL-PEPSTATIN, FORMIC ACID, Putative gag-pro-pol polyprotein
Authors:Li, M, Wlodawer, A.
Deposit date:2012-04-30
Release date:2012-08-01
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibition of XMRV and HIV-1 proteases by pepstatin A and acetyl-pepstatin.
Febs J., 279, 2012
2H2K
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BU of 2h2k by Molmil
Crystal Structure Analysis of Human S100A13
Descriptor: CALCIUM ION, Protein S100-A13
Authors:Li, M, Zhang, P.F, Zhang, J.P, Chang, W.R.
Deposit date:2006-05-19
Release date:2007-05-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure study on human S100A13 at 2.0 A resolution
Biochem.Biophys.Res.Commun., 356, 2007
8W2R
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BU of 8w2r by Molmil
HIV-1 P5-IN intasome core
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (5'-D(*AP*CP*TP*GP*CP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*CP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*GP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*GP*CP*A)-3'), ...
Authors:Li, M, Craigie, R.
Deposit date:2024-02-21
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:HIV-1 Integrase Assembles Multiple Species of Stable Synaptic Complex Intasomes That Are Active for Concerted DNA Integration In vitro.
J.Mol.Biol., 436, 2024
8W09
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HIV-1 wild-type intasome core
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, Integrase, MAGNESIUM ION, ...
Authors:Li, M, Craigie, R.
Deposit date:2024-02-13
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:HIV-1 Integrase Assembles Multiple Species of Stable Synaptic Complex Intasomes That Are Active for Concerted DNA Integration In vitro.
J.Mol.Biol., 436, 2024
8W34
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HIV-1 intasome core assembled with wild-type integrase, 1F
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (5'-D(*AP*CP*TP*GP*CP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*CP*CP*AP*C)-3'), DNA (5'-D(P*GP*TP*GP*GP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*GP*CP*A)-3'), ...
Authors:Li, M, Craigie, R.
Deposit date:2024-02-21
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:HIV-1 Integrase Assembles Multiple Species of Stable Synaptic Complex Intasomes That Are Active for Concerted DNA Integration In vitro.
J.Mol.Biol., 436, 2024
6KHX
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BU of 6khx by Molmil
Crystal structure of Prx from Akkermansia muciniphila
Descriptor: CALCIUM ION, Peroxiredoxin
Authors:Li, M, Wang, J, Xu, W, Wang, Y, Zhang, M, Wang, M.
Deposit date:2019-07-16
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of Akkermansia muciniphila peroxiredoxin reveals a novel regulatory mechanism of typical 2-Cys Prxs by a distinct loop.
Febs Lett., 594, 2020
2JV5
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Nogo54
Descriptor: Reticulon-4
Authors:Li, M, Song, J.
Deposit date:2007-09-12
Release date:2008-09-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure-based design of buffer-soluble Nogo54: a molecular mimic of Nogo-66 to inhibit CNS neuron regeneration
To be Published
2C72
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Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Descriptor: AMINE OXIDASE (FLAVIN-CONTAINING) B, FLAVIN-ADENINE DINUCLEOTIDE, N-PROPARGYL-1(S)-AMINOINDAN
Authors:Li, M, Binda, C, Mattevi, A, Edmondson, D.E.
Deposit date:2005-11-17
Release date:2006-04-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Biochemistry, 45, 2006
2C73
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Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Descriptor: AMINE OXIDASE (FLAVIN-CONTAINING) B, FLAVIN-ADENINE DINUCLEOTIDE, N-PROPARGYL-1(S)-AMINOINDAN
Authors:Li, M, Binda, C, Mattevi, A, Edmondson, D.E.
Deposit date:2005-11-17
Release date:2006-04-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Biochemistry, 45, 2006
2C70
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Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Descriptor: AMINE OXIDASE (FLAVIN-CONTAINING) B, FLAVIN-ADENINE DINUCLEOTIDE, P-NITRO-BENZYLAMINE
Authors:Li, M, Binda, C, Mattevi, A, Edmondson, D.E.
Deposit date:2005-11-17
Release date:2006-04-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Biochemistry, 45, 2006
2C76
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BU of 2c76 by Molmil
Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Descriptor: AMINE OXIDASE (FLAVIN-CONTAINING) B, FLAVIN-ADENINE DINUCLEOTIDE, N-PROPARGYL-1(S)-AMINOINDAN
Authors:Li, M, Binda, C, Mattevi, A, Edmondson, D.E.
Deposit date:2005-11-17
Release date:2006-04-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Biochemistry, 45, 2006
2C75
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BU of 2c75 by Molmil
Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Descriptor: AMINE OXIDASE (FLAVIN-CONTAINING) B, FLAVIN-ADENINE DINUCLEOTIDE, N-PROPARGYL-1(S)-AMINOINDAN
Authors:Li, M, Binda, C, Mattevi, A, Edmondson, D.E.
Deposit date:2005-11-17
Release date:2006-04-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Functional Role of the Aromatic Cage in Human Monoamine Oxidase B: Structures and Catalytic Properties of Tyr435 Mutant Proteins
Biochemistry, 45, 2006
4KHT
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BU of 4kht by Molmil
Triple helix bundle of GP41 complexed with fab 8066
Descriptor: 8066 heavy chain, 8066 light chain, Gp41 helix
Authors:Li, M, Gustchina, A, Wlodawer, A.
Deposit date:2013-05-01
Release date:2014-03-12
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.817 Å)
Cite:Complexes of neutralizing and non-neutralizing affinity matured Fabs with a mimetic of the internal trimeric coiled-coil of HIV-1 gp41.
Plos One, 8, 2013
4KHX
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BU of 4khx by Molmil
Crystal structure of gp41 helix complexed with antibody 8062
Descriptor: 8062 heavy chain, 8062 light chain, gp41 helix
Authors:Li, M, Gustchina, A, Wlodawer, A.
Deposit date:2013-05-01
Release date:2014-03-12
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.921 Å)
Cite:Complexes of neutralizing and non-neutralizing affinity matured Fabs with a mimetic of the internal trimeric coiled-coil of HIV-1 gp41.
Plos One, 8, 2013
8ITS
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BU of 8its by Molmil
Crystal structure of DUF-3268 k-junction
Descriptor: MAGNESIUM ION, RNA (46-MER)
Authors:Li, M, Lilley, D.M.J, Huang, L.
Deposit date:2023-03-22
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of DUF-3268 k-junction
To Be Published
3SLZ
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BU of 3slz by Molmil
The crystal structure of XMRV protease complexed with TL-3
Descriptor: FORMIC ACID, SODIUM ION, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate, ...
Authors:Li, M, Gustchina, A, Wlodawer, A.
Deposit date:2011-06-27
Release date:2011-10-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and biochemical characterization of the inhibitor complexes of xenotropic murine leukemia virus-related virus protease.
Febs J., 278, 2011
3SM2
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BU of 3sm2 by Molmil
The crystal structure of XMRV protease complexed with Amprenavir
Descriptor: gag-pro-pol polyprotein, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Li, M, Gustchina, A, Wlodawer, A.
Deposit date:2011-06-27
Release date:2011-10-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical characterization of the inhibitor complexes of xenotropic murine leukemia virus-related virus protease.
Febs J., 278, 2011
3RQ9
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BU of 3rq9 by Molmil
Structure of Tsi2, a Tse2-immunity protein from Pseudomonas aeruginosa
Descriptor: Type VI secretion immunity protein
Authors:Li, M, Le Trong, I, Stenkamp, R.E, Mougous, J.D.
Deposit date:2011-04-27
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis for Type VI Secretion Effector Recognition by a Cognate Immunity Protein.
Plos Pathog., 8, 2012
3SM1
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BU of 3sm1 by Molmil
The crystal structure of XMRV protease complexed with pepstatin A
Descriptor: FORMIC ACID, Pepstatin A, gag-pro-pol polyprotein
Authors:Li, M, Gustchina, A, Wlodawer, A.
Deposit date:2011-06-27
Release date:2011-10-12
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and biochemical characterization of the inhibitor complexes of xenotropic murine leukemia virus-related virus protease.
Febs J., 278, 2011
6JIX
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BU of 6jix by Molmil
The cyrstal structure of taurine:2-oxoglutarate aminotransferase from Bifidobacterium kashiwanohense, in complex with PLP and glutamate
Descriptor: GLUTAMIC ACID, PYRIDOXAL-5'-PHOSPHATE, taurine:2-oxoglutarate aminotransferase
Authors:Li, M, Lin, L, Zhang, Y, Yuchi, Z.
Deposit date:2019-02-23
Release date:2020-01-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.647 Å)
Cite:Biochemical and structural investigation of taurine:2-oxoglutarate aminotransferase fromBifidobacterium kashiwanohense.
Biochem.J., 476, 2019
7X81
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The crystal structure of PloI4-C16M/D46A/I137V in complex with exo-2+2 adduct
Descriptor: (4S,4aS,6aR,8R,9R,11E,12aR,14aS,17E,18aR,18bR)-9-ethyl-4,8,19-trihydroxy-11,12a,13,18a-tetramethyl-2,3,4,4a,6a,7,8,9,10,12a,13,14,18a,18b-tetradecahydro-14a,17-(metheno)cyclobuta[b]naphtho[2,1-j][1]azacyclotetradecine-16,18(1H,15H)-dione, PloI4
Authors:Li, M, Pan, L.F.
Deposit date:2022-03-10
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023
7X86
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The crystal structure of PloI4-F124L in complex with endo-4+2 adduct
Descriptor: (4S,4aS,6aR,8R,9R,10aS,13S,14aS,18aR,18bR,E)-9-ethyl-4,8,19-trihydroxy-10a,12,13,18a-tetramethyl-2,3,4,4a,6a,7,8,9,10,10a,13,14,18a,18b-tetradecahydro-14a,17-(metheno)benzo[b]naphtho[2,1-h][1]azacyclododecine-16,18(1H,15H)-dione, PloI4
Authors:Li, M, Pan, L.F.
Deposit date:2022-03-11
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:A cyclase that catalyses competing 2 + 2 and 4 + 2 cycloadditions.
Nat.Chem., 15, 2023

225399

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