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PDB: 122 results

6V34
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BU of 6v34 by Molmil
Crystal structure of BRAF V600E oncogenic mutant in complex with TAK-580
Descriptor: 6-amino-5-chloro-N-[(1R)-1-(5-{[5-chloro-4-(trifluoromethyl)pyridin-2-yl]carbamoyl}-1,3-thiazol-2-yl)ethyl]pyrimidine-4-carboxamide, Serine/threonine-protein kinase B-raf
Authors:Gonzalez Del-Pino, G, Li, K, Eck, M.J.
Deposit date:2019-11-25
Release date:2020-12-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of BRAF V600E oncogenic mutant in complex with TAK-580
To Be Published
8GO3
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BU of 8go3 by Molmil
Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, Cytochrome bo(3) ubiquinol oxidase subunit 1, ...
Authors:Cao, H.Y, Li, K, Li, C.Y.
Deposit date:2022-08-24
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
To Be Published
5K3H
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BU of 5k3h by Molmil
Crystals structure of Acyl-CoA oxidase-1 in Caenorhabditis elegans, Apo form-II
Descriptor: Acyl-coenzyme A oxidase
Authors:Zhang, X, Li, K, Jones, R.A, Bruner, S.D, Butcher, R.A.
Deposit date:2016-05-19
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K3J
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BU of 5k3j by Molmil
Crystals structure of Acyl-CoA oxidase-2 in Caenorhabditis elegans bound with FAD, ascaroside-CoA, and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Acyl-coenzyme A oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Zhang, X, Li, K, Jones, R.A, Bruner, S.D, Butcher, R.A.
Deposit date:2016-05-19
Release date:2016-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EG8
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BU of 5eg8 by Molmil
The cap binding site of influenza virus protein PB2 as a drug target
Descriptor: Polymerase basic protein 2, THIOCYANATE ION
Authors:Liu, Y, Zheng, X, Severin, C, Rocha de Moura, T, Li, K, Luo, M.
Deposit date:2015-10-26
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The cap-binding site of influenza virus protein PB2 as a drug target.
Acta Crystallogr D Struct Biol, 72, 2016
5EG7
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BU of 5eg7 by Molmil
The cap binding site of influenza virus protein PB2 as a drug target
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, GLYCEROL, Polymerase basic protein 2
Authors:Severin, C, Rocha de Moura, T, Liu, Y, Li, K, Zheng, X, Luo, M.
Deposit date:2015-10-26
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The cap-binding site of influenza virus protein PB2 as a drug target.
Acta Crystallogr D Struct Biol, 72, 2016
4ZYO
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BU of 4zyo by Molmil
Crystal Structure of Human Integral Membrane Stearoyl-CoA Desaturase with Substrate
Descriptor: Acyl-CoA desaturase, DODECYL-BETA-D-MALTOSIDE, STEAROYL-COENZYME A, ...
Authors:Wang, H, Klein, M.G, Lane, W, Snell, G, Levin, I, Li, K, Zou, H, Sang, B.-C.
Deposit date:2015-05-21
Release date:2015-06-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of human stearoyl-coenzyme A desaturase in complex with substrate.
Nat.Struct.Mol.Biol., 22, 2015
7KLP
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BU of 7klp by Molmil
Crystal structure of a three-tetrad, parallel, K+ stabilized human telomeric G-quadruplex
Descriptor: HEXAETHYLENE GLYCOL, POTASSIUM ION, telomeric DNA
Authors:Yatsunyk, L.A, Li, K.S, Chen, E.V.
Deposit date:2020-10-30
Release date:2020-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Water spines and networks in G-quadruplex structures.
Nucleic Acids Res., 49, 2021
3UTC
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BU of 3utc by Molmil
Ec_IspH in complex with (E)-4-hydroxybut-3-enyl diphosphate
Descriptor: (3E)-4-hydroxybut-3-en-1-yl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Span, I, Wang, K, Wang, W, Zhang, Y, Bacher, A, Eisenreich, W, Li, K, Schulz, C, Oldfield, E, Groll, M.
Deposit date:2011-11-25
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of acetylene hydratase activity of the iron-sulphur protein IspH.
Nat Commun, 3, 2012
6NYB
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BU of 6nyb by Molmil
Structure of a MAPK pathway complex
Descriptor: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Park, E, Rawson, S, Li, K, Jeon, H, Eck, M.J.
Deposit date:2019-02-11
Release date:2019-10-09
Last modified:2020-04-22
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.
Nature, 575, 2019
3HAG
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BU of 3hag by Molmil
Crystal structure of the Hepatitis E Virus-like Particle
Descriptor: Capsid protein
Authors:Guu, T.S.Y, Liu, Z, Ye, Q, Mata, D.A, Li, K, Yin, C, Zhang, J, Tao, Y.J.
Deposit date:2009-05-01
Release date:2009-09-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the hepatitis E virus-like particle suggests mechanisms for virus assembly and receptor binding.
Proc.Natl.Acad.Sci.USA, 106, 2009
8JJR
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BU of 8jjr by Molmil
Cryo-EM structure of Symbiodinium photosystem I
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Zhao, L.S, Wang, N, Li, K, Zhang, Y.Z, Liu, L.N.
Deposit date:2023-05-31
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Architecture of symbiotic dinoflagellate photosystem I-light-harvesting supercomplex in Symbiodinium.
Nat Commun, 15, 2024
3JBM
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BU of 3jbm by Molmil
Electron cryo-microscopy of a virus-like particle of orange-spotted grouper nervous necrosis virus
Descriptor: virus-like particle of orange-spotted grouper nervous necrosis virus
Authors:Xie, J, Li, K, Gao, Y, Huang, R, Lai, Y, Shi, Y, Yang, S, Zhu, G, Zhang, Q, He, J.
Deposit date:2015-09-06
Release date:2016-10-19
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural analysis and insertion study reveal the ideal sites for surface displaying foreign peptides on a betanodavirus-like particle
Vet. Res., 47, 2016
3MIL
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BU of 3mil by Molmil
Crystal structure of isoamyl acetate-hydrolyzing esterase from Saccharomyces cerevisiae
Descriptor: GLYCEROL, Isoamyl acetate-hydrolyzing esterase
Authors:Ma, J, Lu, Q, Yuan, Y, Li, K, Ge, H, Go, Y, Niu, L, Teng, M.
Deposit date:2010-04-11
Release date:2010-11-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of isoamyl acetate-hydrolyzing esterase from Saccharomyces cerevisiae reveals a novel active site architecture and the basis of substrate specificity
Proteins, 79, 2011
8CXF
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BU of 8cxf by Molmil
Crystal structure of an i-motif from the HRAS promoter region
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, HRAS DNA
Authors:Yatsunyk, L.A, Li, K.S.
Deposit date:2022-05-20
Release date:2023-05-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal Structure of an i-Motif from the HRAS Oncogene Promoter.
Angew.Chem.Int.Ed.Engl., 62, 2023
8DHC
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BU of 8dhc by Molmil
Crystal structure of an i-motif from the HRAS promoter region
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, HRAS DNA
Authors:Yatsunyk, L.A, Li, K.S.
Deposit date:2022-06-27
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal Structure of an i-Motif from the HRAS Oncogene Promoter.
Angew.Chem.Int.Ed.Engl., 62, 2023
4EA1
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BU of 4ea1 by Molmil
Co-crystal structure of dehydrosqualene synthase (Crtm) from S. aureus with SQ-109
Descriptor: Dehydrosqualene synthase, N-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-N'-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-2-yl]ethane-1,2-diamine
Authors:Lin, F.-Y, Li, K, Liu, Y.-L, Oldfield, E.
Deposit date:2012-03-21
Release date:2012-04-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Head-to-Head Prenyl Tranferases: Anti-Infective Drug Targets.
J.Med.Chem., 55, 2012
4EA2
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BU of 4ea2 by Molmil
Crystal structure of dehydrosqualene synthase (Crtm) aureus complexed with SQ-109
Descriptor: Dehydrosqualene synthase, MAGNESIUM ION, N-[(2Z)-3,7-dimethylocta-2,6-dien-1-yl]-N'-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-2-yl]ethane-1,2-diamine, ...
Authors:Lin, F.-Y, Li, K, Liu, Y.-L, Oldfield, E.
Deposit date:2012-03-21
Release date:2012-04-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Head-to-Head Prenyl Tranferases: Anti-Infective Drug Targets.
J.Med.Chem., 55, 2012
5EG9
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BU of 5eg9 by Molmil
The cap binding site of influenza virus protein PB2 as a drug target
Descriptor: Polymerase basic protein 2
Authors:Severin, C, Rocha de Moura, T, Liu, Y, Li, K, Zheng, X, Luo, M.
Deposit date:2015-10-26
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The cap-binding site of influenza virus protein PB2 as a drug target.
Acta Crystallogr D Struct Biol, 72, 2016
5ISX
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BU of 5isx by Molmil
Structure of the holo PCP-E didomain of the gramicidin S synthetase A
Descriptor: 4'-PHOSPHOPANTETHEINE, GLYCEROL, Gramicidin S synthase 1
Authors:Chen, W.-H, Li, K, Bruner, S.D.
Deposit date:2016-03-15
Release date:2016-06-29
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.335 Å)
Cite:Interdomain and Intermodule Organization in Epimerization Domain Containing Nonribosomal Peptide Synthetases.
Acs Chem.Biol., 11, 2016
8IVZ
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BU of 8ivz by Molmil
Crystal structure of talin R7 in complex with KANK1 KN motif
Descriptor: KN motif and ankyrin repeat domains 1, Talin-1
Authors:Xu, Y, Li, K, Wei, Z, Cong, Y.
Deposit date:2023-03-29
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
7Y8A
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BU of 7y8a by Molmil
Cryo-EM structure of cryptophyte photosystem I
Descriptor: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, ...
Authors:Zhao, L.S, Zhang, Y.Z, Liu, L.N, Li, K.
Deposit date:2022-06-23
Release date:2023-04-12
Last modified:2023-07-12
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural basis and evolution of the photosystem I-light-harvesting supercomplex of cryptophyte algae.
Plant Cell, 35, 2023
7Y7B
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Cryo-EM structure of cryptophyte photosystem I
Descriptor: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, ...
Authors:Zhao, L.S, Li, K, Zhang, Y.Z, Liu, L.N.
Deposit date:2022-06-22
Release date:2023-04-12
Last modified:2023-07-12
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structural basis and evolution of the photosystem I-light-harvesting supercomplex of cryptophyte algae.
Plant Cell, 35, 2023
5WIN
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BU of 5win by Molmil
JAK2 Pseudokinase in complex with JNJ7706621
Descriptor: 4-({5-amino-1-[(2,6-difluorophenyl)carbonyl]-1H-1,2,4-triazol-3-yl}amino)benzenesulfonamide, Tyrosine-protein kinase JAK2
Authors:Li, Q, Eck, M.J, Li, K, Park, E.
Deposit date:2017-07-19
Release date:2018-08-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Discovery and Structural Characterization of ATP-Site Ligands for the Wild-Type and V617F Mutant JAK2 Pseudokinase Domain.
ACS Chem. Biol., 14, 2019
7M6T
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BU of 7m6t by Molmil
Crystal structure of SOCS2/ElonginB/ElonginC bound to a non-canonical peptide that enhances phospho-peptide binding
Descriptor: Elongin-B, Elongin-C, Non-canonical peptide F3, ...
Authors:Kershaw, N.J, Li, K, Linossi, E.M, Nicholson, S.E.
Deposit date:2021-03-26
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.194 Å)
Cite:Discovery of an exosite on the SOCS2-SH2 domain that enhances SH2 binding to phosphorylated ligands.
Nat Commun, 12, 2021

224201

數據於2024-08-28公開中

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