Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1012 results

4ES5
DownloadVisualize
BU of 4es5 by Molmil
Crystal structure of the cap-binding domain of polymerase basic protein 2 from influenza virus A/Bar-headed Gs/Qinghai/15c/2005 (h5n1) with bound m7GTP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Polymerase basic subunit 2, SULFATE ION
Authors:Meng, G, Liu, Y, Zheng, X.
Deposit date:2012-04-22
Release date:2013-03-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional characterization of K339T substitution identified in the PB2 subunit cap-binding pocket of influenza A virus
J.Biol.Chem., 288, 2013
4HA9
DownloadVisualize
BU of 4ha9 by Molmil
Structural insights into the reduction mechanism of Saccharomyces cerevisia Riboflavin Biosynthesis Reductase Rib7
Descriptor: 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Lv, Z, Sun, J, Liu, Y.
Deposit date:2012-09-25
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and functional insights into Saccharomyces cerevisiae riboflavin biosynthesis reductase RIB7.
Plos One, 8, 2013
4EFO
DownloadVisualize
BU of 4efo by Molmil
Crystal structure of the ubiquitin-like domain of human TBK1
Descriptor: Serine/threonine-protein kinase TBK1
Authors:Li, J, Li, J, Miyahira, A, Sun, J, Liu, Y, Cheng, G, Liang, H.
Deposit date:2012-03-30
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.769 Å)
Cite:Crystal structure of the ubiquitin-like domain of human TBK1.
Protein Cell, 3, 2012
7WQR
DownloadVisualize
BU of 7wqr by Molmil
Crystal structure of Aldo-keto reductase 1C3 complexed with compound 28
Descriptor: Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ~{N}-(3-chlorophenyl)-2-[(3,5-dimethyl-1,2-oxazol-4-yl)methoxy]benzamide
Authors:Jiang, J, Liu, Y, He, S, Chen, Y, Chu, X, Liu, Y, Guo, Q, Zhao, L, Feng, F, Liu, W, Zhang, X, Sun, H, Fang, P.
Deposit date:2022-01-25
Release date:2023-01-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.124 Å)
Cite:Development of highly potent and specific AKR1C3 inhibitors to restore the chemosensitivity of drug-resistant breast cancer.
Eur.J.Med.Chem., 247, 2022
7WQS
DownloadVisualize
BU of 7wqs by Molmil
Crystal structure of Aldo-keto reductase 1C3 complexed with compound 25
Descriptor: 2-[(3,5-dimethyl-1,2-oxazol-4-yl)methoxy]-~{N}-(3-methoxyphenyl)benzamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Jiang, J, Liu, Y, He, S, Chen, Y, Chu, X, Liu, Y, Guo, Q, Zhao, L, Feng, F, Liu, W, Zhang, X, Sun, H, Fang, P.
Deposit date:2022-01-26
Release date:2023-01-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Development of highly potent and specific AKR1C3 inhibitors to restore the chemosensitivity of drug-resistant breast cancer.
Eur.J.Med.Chem., 247, 2022
7WQM
DownloadVisualize
BU of 7wqm by Molmil
Crystal structure of Aldo-keto reductase 1C3 complexed with compound 24
Descriptor: 2-[(3,5-dimethyl-1,2-oxazol-4-yl)methoxy]-~{N}-(2-methoxyphenyl)benzamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Jiang, J, Liu, Y, He, S, Chen, Y, Chu, X, Liu, Y, Guo, Q, Zhao, L, Feng, F, Liu, W, Zhang, X, Sun, H, Fang, P.
Deposit date:2022-01-25
Release date:2023-01-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Development of highly potent and specific AKR1C3 inhibitors to restore the chemosensitivity of drug-resistant breast cancer.
Eur.J.Med.Chem., 247, 2022
4ENF
DownloadVisualize
BU of 4enf by Molmil
Crystal structure of the cap-binding domain of polymerase basic protein 2 from influenza virus A/Puerto Rico/8/34(h1n1)
Descriptor: 1,4-BUTANEDIOL, NITRATE ION, Polymerase basic protein 2
Authors:Meng, G, Liu, Y, Zheng, X.
Deposit date:2012-04-13
Release date:2013-03-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural and functional characterization of K339T substitution identified in the PB2 subunit cap-binding pocket of influenza A virus
J.Biol.Chem., 288, 2013
6JWE
DownloadVisualize
BU of 6jwe by Molmil
structure of RET G-quadruplex in complex with colchicine
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-20
Release date:2020-02-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
6JWD
DownloadVisualize
BU of 6jwd by Molmil
structure of RET G-quadruplex in complex with berberine
Descriptor: BERBERINE, DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-19
Release date:2020-04-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
1GHD
DownloadVisualize
BU of 1ghd by Molmil
Crystal structure of the glutaryl-7-aminocephalosporanic acid acylase by mad phasing
Descriptor: GLUTARYL-7-AMINOCEPHALOSPORANIC ACID ACYLASE
Authors:Ding, Y, Jiang, W, Mao, X, He, H, Zhang, S, Tang, H, Bartlam, M, Ye, S, Jiang, F, Liu, Y, Zhao, G, Rao, Z.
Deposit date:2000-12-07
Release date:2003-07-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Affinity alkylation of the Trp-B4 residue of the beta -subunit of the glutaryl 7-aminocephalosporanic acid acylase of Pseudomonas sp. 130.
J.Biol.Chem., 277, 2002
2P0K
DownloadVisualize
BU of 2p0k by Molmil
Crystal structure of SCMH1
Descriptor: CHLORIDE ION, PHOSPHATE ION, Polycomb protein SCMH1
Authors:Herzanych, N, Senisterra, G, Liu, Y, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2007-02-28
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of SCMH1
To be Published
4NRR
DownloadVisualize
BU of 4nrr by Molmil
Crystal Structure of Glycoside Hydrolase Family 5 Mannosidase (E202A mutant) from Rhizomucor miehei in complex with mannosyl-fructose
Descriptor: Exo-beta-1,4-mannosidase, beta-D-mannopyranose-(1-4)-beta-D-fructofuranose
Authors:Jiang, Z.Q, Zhou, P, Yang, S.Q, Liu, Y, Yan, Q.J.
Deposit date:2013-11-27
Release date:2014-11-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
4O6O
DownloadVisualize
BU of 4o6o by Molmil
Structural and functional studies the characterization of Cys4 Zinc-finger motif in the recombination mediator protein RecR
Descriptor: IMIDAZOLE, Recombination protein RecR, ZINC ION
Authors:Tang, Q, Liu, Y.P, Yan, X.X, Liang, D.C.
Deposit date:2013-12-23
Release date:2014-12-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional characterization of Cys4 zinc finger motif in the recombination mediator protein RecR.
DNA Repair (Amst.), 24, 2014
4O6P
DownloadVisualize
BU of 4o6p by Molmil
Structural and functional studies the characterization of C58G/C70G mutant in Cys4 Zinc-finger motif in the recombination mediator protein RecR
Descriptor: Recombination protein RecR, ZINC ION
Authors:Tang, Q, Liu, Y.P, Yan, X.X, Liang, D.C.
Deposit date:2013-12-23
Release date:2014-12-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional characterization of Cys4 zinc finger motif in the recombination mediator protein RecR.
DNA Repair (Amst.), 24, 2014
5XWF
DownloadVisualize
BU of 5xwf by Molmil
Crystal structure of chitinase (RmChi1) from Rhizomucor miehei (SP3221/SAD)
Descriptor: Fungal chitinase from Rhizomucor miehei (SeMet-substituted proteins)
Authors:Jiang, Z.Q, Hu, S.Q, Liu, Y.C, Qin, Z, Yan, Q.J, Yang, S.Q.
Deposit date:2017-06-29
Release date:2018-07-04
Last modified:2021-08-18
Method:X-RAY DIFFRACTION (2.581 Å)
Cite:Crystal structure of a chitinase (RmChiA) from the thermophilic fungus Rhizomucor miehei with a real active site tunnel.
Biochim Biophys Acta Proteins Proteom, 2021
8V4M
DownloadVisualize
BU of 8v4m by Molmil
CCP5 in complex with microtubules class3
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-29
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
8V4K
DownloadVisualize
BU of 8v4k by Molmil
CCP5 in complex with microtubules class1
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-29
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
8V3S
DownloadVisualize
BU of 8v3s by Molmil
Structure of CCP5 class3
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-28
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
8V4L
DownloadVisualize
BU of 8v4l by Molmil
CCP5 in complex with microtubules class2
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-29
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
8V3R
DownloadVisualize
BU of 8v3r by Molmil
Structure of CCP5 class2
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-28
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
8JZ7
DownloadVisualize
BU of 8jz7 by Molmil
Cryo-EM structure of MK-6892-bound HCAR2 in complex with Gi protein
Descriptor: 2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, C, Tian, X.W, Liu, Y, Cheng, L, Yan, W, Shao, Z.H.
Deposit date:2023-07-04
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Orthosteric ligand selectivity and allosteric probe dependence at Hydroxycarboxylic acid receptor HCAR2.
Signal Transduct Target Ther, 8, 2023
7YIR
DownloadVisualize
BU of 7yir by Molmil
Crystal structure of N-terminal PH domain of ARAP3 protein from human
Descriptor: Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3, DI(HYDROXYETHYL)ETHER
Authors:Zhang, Y.J, Liu, Y.R, Wu, B.
Deposit date:2022-07-18
Release date:2023-05-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural Insights Uncover the Specific Phosphoinositide Recognition by the PH1 Domain of Arap3.
Int J Mol Sci, 24, 2023
7YIS
DownloadVisualize
BU of 7yis by Molmil
Crystal structure of N-terminal PH domain of ARAP3 protein in complex with inositol 1,3,4,5-tetrakisphosphate
Descriptor: (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
Authors:Zhang, Y.J, Liu, Y.R, Wu, B.
Deposit date:2022-07-18
Release date:2023-05-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural Insights Uncover the Specific Phosphoinositide Recognition by the PH1 Domain of Arap3.
Int J Mol Sci, 24, 2023
5ZUE
DownloadVisualize
BU of 5zue by Molmil
GTP-bound, double-stranded, curved FtsZ protofilament structure
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-TRIPHOSPHATE
Authors:Guan, F, Yu, J, Yu, J, Liu, Y, Li, Y, Feng, X.H, Huang, K.C, Chang, Z, Ye, S.
Deposit date:2018-05-07
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Lateral interactions between protofilaments of the bacterial tubulin homolog FtsZ are essential for cell division
Elife, 7, 2018
3UA4
DownloadVisualize
BU of 3ua4 by Molmil
Crystal Structure of Protein Arginine Methyltransferase PRMT5
Descriptor: GLYCEROL, Protein arginine N-methyltransferase 5
Authors:Sun, L, Wang, M, Lv, Z, Yang, N, Liu, Y, Bao, S, Gong, W, Xu, R.M.
Deposit date:2011-10-21
Release date:2011-12-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Structural insights into protein arginine symmetric dimethylation by PRMT5
Proc.Natl.Acad.Sci.USA, 108, 2011

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon