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PDB: 1012 件

6B0V
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Crystal Structure of small molecule ARS-107 covalently bound to K-Ras G12C
分子名称: 1-[3-(4-{[(4,5-dichloro-2-hydroxyphenyl)amino]acetyl}piperazin-1-yl)azetidin-1-yl]propan-1-one, CALCIUM ION, GTPase KRas, ...
著者Hansen, R, Peters, U, Babbar, A, Chen, Y, Feng, J, Janes, M.R, Li, L.-S, Ren, P, Liu, Y, Zarrinkar, P.P.
登録日2017-09-15
公開日2018-05-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献The reactivity-driven biochemical mechanism of covalent KRASG12Cinhibitors.
Nat. Struct. Mol. Biol., 25, 2018
3UA3
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Crystal Structure of Protein Arginine Methyltransferase PRMT5 in complex with SAH
分子名称: Protein arginine N-methyltransferase 5, S-ADENOSYL-L-HOMOCYSTEINE
著者Sun, L, Wang, M, Lv, Z, Yang, N, Liu, Y, Bao, S, Gong, W, Xu, R.M.
登録日2011-10-20
公開日2011-12-14
最終更新日2011-12-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into protein arginine symmetric dimethylation by PRMT5
Proc.Natl.Acad.Sci.USA, 108, 2011
4NRS
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Crystal Structure of Glycoside Hydrolase Family 5 Mannosidase (E202A mutant) from Rhizomucor miehei in complex with mannobiose
分子名称: Exo-beta-1,4-mannosidase, beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose
著者Jiang, Z.Q, Zhou, P, Yang, S.Q, Liu, Y, Yan, Q.J.
登録日2013-11-27
公開日2014-11-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
4QP0
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Crystal Structure Analysis of the Endo-1,4-beta-mannanase from Rhizomucor miehei
分子名称: Endo-beta-mannanase, SULFATE ION
著者Zheng, Q.J, Peng, Z, Liu, Y, Yan, Q.J, Chen, Z.Z, Qin, Z.
登録日2014-06-22
公開日2014-11-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
7E29
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Crystal Structure of Saccharomyces cerevisiae Ioc4 PWWP domain fused with MBP
分子名称: Maltose/maltodextrin-binding periplasmic protein,ISWI one complex protein 4, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Li, J, Smolle, M, Liang, H, Liu, Y.
登録日2021-02-05
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献H3K36 methylation and DNA-binding both promote Ioc4 recruitment and Isw1b remodeler function.
Nucleic Acids Res., 50, 2022
1WP8
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crystal structure of Hendra Virus fusion core
分子名称: Fusion glycoprotein F0,Fusion glycoprotein F0
著者Xu, Y, Liu, Y, Lou, Z, Su, N, Bai, Z, Gao, G.F, Rao, Z.
登録日2004-08-31
公開日2005-11-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of Nipah and Hendra virus fusion core proteins
FEBS J., 273, 2006
8TXQ
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CryoEM structure of non-neutralizing antibody CBH-4B in complex with Hepatitis C virus envelope glycoprotein E2
分子名称: CBH-4B Heavy chain, CBH-4B Light chain, envelope glycoprotein E2
著者Shahid, S, Liqun, J, Liu, Y, Hasan, S.S, Mariuzza, R.A.
登録日2023-08-24
公開日2024-08-28
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献CryoEM structure of non-neutralizing antibody CBH-4B in complex with Hepatitis C virus envelope glycoprotein E2
To Be Published
7D3X
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Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D3W
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Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y, Lan, W.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
2LQ9
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Solution structure of the K60A mutant of Atox1
分子名称: Copper transport protein ATOX1
著者Xi, Z, Shi, C, Lai, C, Tian, C, Liu, Y.
登録日2012-02-28
公開日2013-03-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the K60A mutant of Atox1
To be Published
2JVC
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NMR solution structure of ubiquitin like protein
分子名称: ubiquitin_like protein
著者Tran, N.B, Liu, Y, Hew, L.C.
登録日2007-09-17
公開日2008-10-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR solution structure of ubiquitin like protein
To be Published
2N3J
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Solution Structure of the alpha-crystallin domain from the redox-sensitive chaperone, HSPB1
分子名称: Heat shock protein beta-1
著者Rajagopal, P, Liu, Y, Shi, L, Klevit, R.E.
登録日2015-06-03
公開日2015-08-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of the alpha-crystallin domain from the redox-sensitive chaperone, HSPB1.
J.Biomol.Nmr, 63, 2015
2OIG
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BU of 2oig by Molmil
Crystal structure of RS21-C6 core segment and dm5CTP complex
分子名称: 2'-DEOXY-5-METHYLCYTIDINE 5'-(TETRAHYDROGEN TRIPHOSPHATE), RS21-C6
著者Wu, B, Liu, Y, Zhao, Q, Liao, S, Zhang, J, Bartlam, M, Chen, W, Rao, Z.
登録日2007-01-11
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal Structure of RS21-C6, Involved in Nucleoside Triphosphate Pyrophosphohydrolysis
J.Mol.Biol., 367, 2007
2OIE
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Crystal structure of RS21-C6 core segment RSCUT
分子名称: RS21-C6, SULFATE ION
著者Wu, B, Liu, Y, Zhao, Q, Liao, S, Zhang, J, Bartlam, M, Chen, W, Rao, Z.
登録日2007-01-10
公開日2007-03-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of RS21-C6, Involved in Nucleoside Triphosphate Pyrophosphohydrolysis
J.Mol.Biol., 367, 2007
2O0F
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Docking of the modified RF3 X-ray structure into cryo-EM map of E.coli 70S ribosome bound with RF3
分子名称: Peptide chain release factor 3
著者Gao, H, Zhou, Z, Rawat, U, Huang, C, Bouakaz, L, Wang, C, Liu, Y, Zavialov, A, Gursky, R, Sanyal, S, Ehrenberg, M, Frank, J, Song, H.
登録日2006-11-27
公開日2007-07-24
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (15.5 Å)
主引用文献RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors
Cell(Cambridge,Mass.), 129, 2007
2K5U
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BU of 2k5u by Molmil
Solution structure of myirstoylated yeast ARF1 protein, GDP-bound
分子名称: ADP-ribosylation factor 1, GUANOSINE-5'-DIPHOSPHATE
著者Prestegard, J, Liu, Y.
登録日2008-06-30
公開日2009-01-27
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure and Membrane Interaction of Myristoylated ARF1
Structure, 17, 2009
7W7P
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BU of 7w7p by Molmil
Cryo-EM structure of gMCM8/9 helicase
分子名称: DNA helicase MCM8, DNA helicase MCM9
著者Zheng, J.F, Weng, Z.F, Liu, Y.F.
登録日2021-12-06
公開日2023-05-24
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structural and mechanistic insights into the MCM8/9 helicase complex.
Elife, 12, 2023
5YDE
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BU of 5yde by Molmil
Crystal structure of a disease-related gene, hCDC73(1-111)
分子名称: Parafibromin
著者Sun, W, Kuang, X.L, Liu, Y.P, Tian, L.F, Yan, X.X, Xu, W.Q.
登録日2017-09-13
公開日2017-12-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.023 Å)
主引用文献Crystal structure of the N-terminal domain of human CDC73 and its implications for the hyperparathyroidism-jaw tumor (HPT-JT) syndrome
Sci Rep, 7, 2017
5YDF
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Crystal structure of a disease-related gene, hCDC73(1-100)
分子名称: Parafibromin
著者Sun, W, Kuang, X.L, Liu, Y.P, Tian, L.F, Yan, X.X, Xu, W.Q.
登録日2017-09-13
公開日2017-12-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Crystal structure of the N-terminal domain of human CDC73 and its implications for the hyperparathyroidism-jaw tumor (HPT-JT) syndrome
Sci Rep, 7, 2017
7XC4
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BU of 7xc4 by Molmil
Crystal structure of SARS-CoV-2 NSP3 Macrodomain 3 (SARS-unique domain-M) in complex with Oxaprozin
分子名称: 3-(4,5-diphenyl-1,3-oxazol-2-yl)propanoic acid, Papain-like protease nsp3
著者Li, J, Liu, Y, Gao, J, Ruan, K.
登録日2022-03-22
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Two Binding Sites of SARS-CoV-2 Macrodomain 3 Probed by Oxaprozin and Meclomen.
J.Med.Chem., 65, 2022
5YY8
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Crystal structure of the Kelch domain of human NS1-BP
分子名称: Influenza virus NS1A-binding protein
著者Guo, L, Liu, Y, Liang, H.
登録日2017-12-08
公開日2018-03-14
実験手法X-RAY DIFFRACTION (1.979 Å)
主引用文献Crystal structure of the Kelch domain of human NS1-binding protein at 1.98 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 74, 2018
2K6S
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Structure of Rab11-FIP2 C-terminal Coiled-coil Domain
分子名称: Rab11fip2 protein
著者Wei, J, Liu, Y, Baleja, J.D.
登録日2008-07-18
公開日2009-06-16
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Disorder and structure in the Rab11 binding domain of Rab11 family interacting protein 2.
Biochemistry, 48, 2009
8JIF
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Cryo-EM Structure of 3-axis block of AAV9P31-Car4 complex
分子名称: Capsid protein VP1, Carbonic anhydrase 4, ZINC ION
著者Zhang, R, Liu, Y, Lou, Z.
登録日2023-05-26
公開日2024-01-31
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.28 Å)
主引用文献Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV.
Plos Pathog., 20, 2024
7WI7
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Crystal structure of human MCM8/9 complex
分子名称: DNA helicase MCM8, DNA helicase MCM9, ZINC ION
著者Li, J, Liu, Y.
登録日2022-01-03
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (6.6 Å)
主引用文献Crystal structure of human MCM8/9 complex
To Be Published
7X8M
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NMR Solution Structure of the 2:1 Berberine-KRAS-G4 Complex
分子名称: BERBERINE, DNA (24-MER)
著者Wang, K.B, Liu, Y, Li, J, Xiao, C, Gu, W, Li, Y, Xia, Y.Z, Yan, T, Yang, M.H, Kong, L.Y.
登録日2022-03-14
公開日2022-09-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insight into the bulge-containing KRAS oncogene promoter G-quadruplex bound to berberine and coptisine.
Nat Commun, 13, 2022

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