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PDB: 98 件
4JEG
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Crystal Structure of Monobody CS1/SHP2 C-SH2 Domain Complex
分子名称: Monobody CS1, Tyrosine-protein phosphatase non-receptor type 11
著者Sha, F, Koide, S.
登録日2013-02-26
公開日2013-08-28
最終更新日2014-03-12
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Dissection of the BCR-ABL signaling network using highly specific monobody inhibitors to the SHP2 SH2 domains.
Proc.Natl.Acad.Sci.USA, 110, 2013
5SYQ
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BU of 5syq by Molmil
Solution structure of Aquifex aeolicus Aq1974
分子名称: Uncharacterized protein aq_1974
著者Sachleben, J.R, Gawlak, G, Hoey, R.J, Liu, G, Joachimiak, A, Montelione, G.T, Koide, S, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG)
登録日2016-08-11
公開日2016-09-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Aromatic claw: A new fold with high aromatic content that evades structural prediction.
Protein Sci., 26, 2017
5DC0
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BU of 5dc0 by Molmil
CRYSTAL STRUCTURE OF MONOBODY GG3/ABL1 SH2 DOMAIN COMPLEX
分子名称: Fibronectin, Tyrosine-protein kinase ABL1
著者Wojcik, J.B, Grabe, G, Koide, S.
登録日2015-08-22
公開日2016-03-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface.
J.Biol.Chem., 291, 2016
5ECJ
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BU of 5ecj by Molmil
Crystal structure of monobody Mb(S4) bound to Prdm14 in complex with Mtgr1
分子名称: Monobody Mb(S4), PR domain zinc finger protein 14,Protein CBFA2T2
著者Gupta, A, Koide, S.
登録日2015-10-20
公開日2015-12-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献ETO family protein Mtgr1 mediates Prdm14 functions in stem cell maintenance and primordial germ cell formation.
Elife, 4, 2015
5E08
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BU of 5e08 by Molmil
Specific Recognition of a Single-stranded RNA Sequence by an Engineered Synthetic Antibody Fragment
分子名称: Fab Heavy Chain, Fab Light Chain, RNA
著者Huang, H, Qin, D, Li, N, Shao, Y, Staley, J.P, Kossiakoff, A.A, Koide, S, Piccirilli, J.A.
登録日2015-09-28
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Specific Recognition of a Single-Stranded RNA Sequence by a Synthetic Antibody Fragment.
J.Mol.Biol., 428, 2016
4JMG
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BU of 4jmg by Molmil
Crystal structure of the synthetic protein in complex with pY peptide
分子名称: Clamp Ptpn11_pY580, MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 11
著者Yasui, N, Smith, L, Koide, S.
登録日2013-03-14
公開日2014-04-23
最終更新日2014-08-06
実験手法X-RAY DIFFRACTION (1.403 Å)
主引用文献Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation.
Mol.Cell, 54, 2014
4JMH
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Crystal structure of synthetic protein in complex with double pY peptide
分子名称: Clamp Shc1_pY239/240, SHC-transforming protein 1
著者Yasui, N, Smith, L, Koide, S.
登録日2013-03-14
公開日2014-04-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.408 Å)
主引用文献Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation.
Mol.Cell, 54, 2014
2G8C
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BU of 2g8c by Molmil
Atomic-resolution crystal structure of Borrelia burgdorferi OspA via surface entropy reduction
分子名称: IMIDAZOLE, TETRAETHYLENE GLYCOL, outer surface protein A
著者Makabe, K, Tereshko, V, Koide, S.
登録日2006-03-02
公開日2006-08-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Atomic-resolution crystal structure of Borrelia burgdorferi outer surface protein A via surface engineering.
Protein Sci., 15, 2006
2I5V
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BU of 2i5v by Molmil
Crystal structure of OspA mutant
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Terechko, V, Koide, S.
登録日2006-08-25
公開日2007-12-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-Resolution Structure of a Self-Assembly-Competent Form of a Hydrophobic Peptide Captured in a Soluble β-Sheet Scaffold.
J.Mol.Biol., 378, 2008
2OBG
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Crystal Structure of Monobody MBP-74/Maltose Binding Protein Fusion Complex
分子名称: Maltose Binding periplasmic Protein and Monobody MBP-74 Fusion protein
著者Gilbreth, R.N, Tereshko, V, Koide, S.
登録日2006-12-19
公開日2007-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献High-affinity single-domain binding proteins with a binary-code interface.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3EFD
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BU of 3efd by Molmil
The crystal structure of the cytoplasmic domain of KcsA
分子名称: FabH, FabL, KcsA
著者Uysal, S, Vasquez, V, Tereshko, V, Esaki, K, Fellouse, F.A, Sidhu, S.S, Koide, S, Perozo, E, Kossiakoff, A.
登録日2008-09-08
公開日2009-04-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of full-length KcsA in its closed conformation.
Proc.Natl.Acad.Sci.USA, 106, 2009
3EFF
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BU of 3eff by Molmil
The Crystal Structure of Full-Length KcsA in its Closed Conformation
分子名称: FAB, Voltage-gated potassium channel
著者Uysal, S, Vasquez, V, Tereshko, T, Esaki, K, Fellouse, F.A, Sidhu, S.S, Koide, S, Perozo, E, Kossiakoff, A.
登録日2008-09-08
公開日2009-04-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Crystal structure of full-length KcsA in its closed conformation.
Proc.Natl.Acad.Sci.USA, 106, 2009
2OY5
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BU of 2oy5 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Biancalana, M, Yan, S, Koide, S.
登録日2007-02-21
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
2IQY
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BU of 2iqy by Molmil
Rat Phosphatidylethanolamine-Binding Protein
分子名称: CALCIUM ION, CHLORIDE ION, Phosphatidylethanolamine-binding protein 1
著者Kim, Y, Joachimiak, G, Heil, G.L, Koide, S, Joachimiak, A.
登録日2006-10-14
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of Rat Phosphatidylethanolamine-Binding Protein
To be Published
2OL7
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BU of 2ol7 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, S.
登録日2007-01-18
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL6
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BU of 2ol6 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, S.
登録日2007-01-18
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL8
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BU of 2ol8 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, S.
登録日2007-01-18
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OY1
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BU of 2oy1 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, S.
登録日2007-02-21
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
3CKG
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BU of 3ckg by Molmil
The crystal structure of OspA deletion mutant
分子名称: MAGNESIUM ION, Outer surface protein A
著者Makabe, K, Koide, S.
登録日2008-03-14
公開日2009-01-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
3EEX
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BU of 3eex by Molmil
The crystal structure of OspA mutant
分子名称: HEXAETHYLENE GLYCOL, Outer Surface Protein A
著者Makabe, K, Biancalana, M, Koide, S.
登録日2008-09-06
公開日2009-09-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
3CKA
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BU of 3cka by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A, PENTAETHYLENE GLYCOL
著者Makabe, K, Biancalana, M, Terechko, V, Koide, S.
登録日2008-03-14
公開日2009-03-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
3CKF
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BU of 3ckf by Molmil
The crystal structure of OspA deletion mutant
分子名称: Outer surface protein A
著者Makabe, K, Koide, S.
登録日2008-03-14
公開日2009-01-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
4M1C
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Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40)
分子名称: Amyloid beta A4 protein, Fab-bound IDE, heavy chain, ...
著者McCord, L.M, Liang, W, Farcasanu, M, Scherpelz, K, Meredith, S.C, Koide, S, Tang, W.J.
登録日2013-08-02
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.5007 Å)
主引用文献Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40)
To be Published
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