Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5628 results

5A19
DownloadVisualize
BU of 5a19 by Molmil
The structure of MAT2A in complex with PPNP.
Descriptor: (DIPHOSPHONO)AMINOPHOSPHONIC ACID, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Murray, B, Antonyuk, S.V, Marina, A, Lu, S.C, Mato, J.M, Hasnain, S.S, Rojas, A.L.
Deposit date:2015-04-28
Release date:2016-02-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystallography Captures Catalytic Steps in Human Methionine Adenosyltransferase Enzymes.
Proc.Natl.Acad.Sci.USA, 113, 2016
1ATP
DownloadVisualize
BU of 1atp by Molmil
2.2 angstrom refined crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with MNATP and a peptide inhibitor
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PEPTIDE INHIBITOR PKI(5-24), ...
Authors:Zheng, J, Trafny, E.A, Knighton, D.R, Xuong, N.-H, Taylor, S.S, Teneyck, L.F, Sowadski, J.M.
Deposit date:1993-01-08
Release date:1993-04-15
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:2.2 A refined crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with MnATP and a peptide inhibitor.
Acta Crystallogr.,Sect.D, 49, 1993
7K1V
DownloadVisualize
BU of 7k1v by Molmil
Partial open state of Mycobacterium tuberculosis zinc metalloprotease 1
Descriptor: Zinc metalloprotease
Authors:Mancl, J.M, Liang, W.G, Zhao, M, Tang, W.
Deposit date:2020-09-08
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural analysis of Mycobacterium tuberculosis M13 metalloprotease Zmp1 open states.
Structure, 29, 2021
1W5D
DownloadVisualize
BU of 1w5d by Molmil
Crystal structure of PBP4a from Bacillus subtilis
Descriptor: CALCIUM ION, PENICILLIN-BINDING PROTEIN
Authors:Sauvage, E, Herman, R, Petrella, S, Duez, C, Frere, J.M, Charlier, P.
Deposit date:2004-08-06
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Bacillus Subtilis Penicillin-Binding Protein 4A, and its Complex with a Peptidoglycan Mimetic Peptide.
J.Mol.Biol., 371, 2007
7Z0N
DownloadVisualize
BU of 7z0n by Molmil
Structure-Based Design of a Novel Class of Autotaxin Inhibitors Based on Endogenous Allosteric Modulators
Descriptor: CALCIUM ION, GLYCEROL, IODIDE ION, ...
Authors:Salgado-Polo, F, Clark, J.M, Macdonald, S.J.F, Barrett, T.N, Perrakis, A, Jamieson, A.
Deposit date:2022-02-23
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-Based Design of a Novel Class of Autotaxin Inhibitors Based on Endogenous Allosteric Modulators.
J.Med.Chem., 65, 2022
2P4M
DownloadVisualize
BU of 2p4m by Molmil
High pH structure of Rtms5 H146S variant
Descriptor: GFP-like non-fluorescent chromoprotein, IODIDE ION
Authors:Battad, J.M, Wilmann, P.G, Olsen, S, Byres, E, Smith, S.C, Dove, S.G, Turcic, K.N, Devenish, R.J, Rossjohn, J, Prescott, M.
Deposit date:2007-03-12
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A structural basis for the pH-dependent increase in fluorescence efficiency of chromoproteins
J.Mol.Biol., 368, 2007
2P1J
DownloadVisualize
BU of 2p1j by Molmil
Crystal structure of a polC-type DNA polymerase III exonuclease domain from Thermotoga maritima
Descriptor: DNA polymerase III polC-type
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Izuka, M, Sridhar, V, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-05
Release date:2007-03-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a polC-type DNA polymerase III exonuclease domain from Thermotoga maritima
To be Published
2OXL
DownloadVisualize
BU of 2oxl by Molmil
Structure and Function of the E. coli Protein YmgB: a Protein Critical for Biofilm Formation and Acid Resistance
Descriptor: Hypothetical protein ymgB, octyl beta-D-glucopyranoside
Authors:Page, R, Peti, W, Woods, T.K, Palermino, J.M, Doshi, O.
Deposit date:2007-02-20
Release date:2007-10-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Function of the Escherichia coli Protein YmgB: A Protein Critical for Biofilm Formation and Acid-resistance.
J.Mol.Biol., 373, 2007
2OX4
DownloadVisualize
BU of 2ox4 by Molmil
Crystal structure of putative dehydratase from Zymomonas mobilis ZM4
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Patskovsky, Y, Toro, R, Sauder, J.M, Freeman, J.C, Bain, K, Gheyi, T, Wasserman, S.R, Smith, D, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-19
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Putative Dehydratase from Zymomonas Mobilis Zm4
To be Published
2OZ3
DownloadVisualize
BU of 2oz3 by Molmil
Crystal structure of L-Rhamnonate dehydratase from Azotobacter vinelandii
Descriptor: GLYCEROL, Mandelate racemase/muconate lactonizing enzyme, SODIUM ION
Authors:Patskovsky, Y, Toro, R, Sauder, J.M, Freeman, J.C, Bain, K, Gheyi, T, Wu, B, Wasserman, S.R, Smith, D, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-23
Release date:2007-03-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of L-Rhamnonate dehydratase from azotobacter vinelandii
To be Published
2P5W
DownloadVisualize
BU of 2p5w by Molmil
Crystal structures of high affinity human T-cell receptors bound to pMHC reveal native diagonal binding geometry
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, CALCIUM ION, ...
Authors:Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K.
Deposit date:2007-03-16
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
Protein Eng.Des.Sel., 20, 2007
2P2U
DownloadVisualize
BU of 2p2u by Molmil
Crystal structure of putative host-nuclease inhibitor protein Gam from Desulfovibrio vulgaris
Descriptor: Host-nuclease inhibitor protein Gam, putative
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Zhang, F, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-07
Release date:2007-03-27
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of putative host-nuclease inhibitor protein Gam from Desulfovibrio vulgaris
To be Published
2P4U
DownloadVisualize
BU of 2p4u by Molmil
Crystal structure of acid phosphatase 1 (Acp1) from Mus musculus
Descriptor: Acid phosphatase 1, PHOSPHATE ION
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Wu, B, Xu, W, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-13
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
2P67
DownloadVisualize
BU of 2p67 by Molmil
Crystal structure of LAO/AO transport system kinase
Descriptor: CHLORIDE ION, LAO/AO transport system kinase, SODIUM ION
Authors:Ramagopal, U.A, Adams, J, Rodgers, L, Toro, R, Bain, K, Rutter, M, Schwinn, K, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-16
Release date:2007-04-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of LAO/AO transport system kinase
To be Published
2P0I
DownloadVisualize
BU of 2p0i by Molmil
Crystal structure of L-rhamnonate dehydratase from Gibberella zeae
Descriptor: GLYCEROL, L-rhamnonate dehydratase, SULFATE ION
Authors:Patskovsky, Y, Toro, R, Sauder, J.M, Dickey, M, Logan, C, Gheyi, T, Wasserman, S.R, Smith, D, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-28
Release date:2007-03-13
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of L-Rhamnonate Dehydratase from Gibberella Zeae
To be Published
2OZA
DownloadVisualize
BU of 2oza by Molmil
Structure of p38alpha complex
Descriptor: MAP kinase-activated protein kinase 2, Mitogen-activated protein kinase 14
Authors:White, A, Pargellis, C.A, Studts, J.M, Werneburg, B.G, Farmer II, B.T.
Deposit date:2007-02-25
Release date:2007-04-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of MAPK-activated protein kinase 2:p38 assembly
Proc.Natl.Acad.Sci.Usa, 104, 2007
2P27
DownloadVisualize
BU of 2p27 by Molmil
Crystal Structure of Human Pyridoxal Phosphate Phosphatase with Mg2+ at 1.9 A resolution
Descriptor: MAGNESIUM ION, Pyridoxal phosphate phosphatase
Authors:Ramagopal, U.A, Freeman, J, Izuka, M, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-07
Release date:2007-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
2PBN
DownloadVisualize
BU of 2pbn by Molmil
Crystal structure of the human tyrosine receptor phosphate gamma
Descriptor: Receptor-type tyrosine-protein phosphatase gamma, SULFATE ION
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Reyes, C, Pelletier, L, Jin, X, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-28
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
2P5E
DownloadVisualize
BU of 2p5e by Molmil
Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC Reveal Native Diagonal Binding Geometry
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, Cancer/testis antigen 1B, ...
Authors:Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K.
Deposit date:2007-03-15
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
Protein Eng.Des.Sel., 20, 2007
2P0A
DownloadVisualize
BU of 2p0a by Molmil
The crystal structure of human synapsin III (SYN3) in complex with AMPPNP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Turnbull, A.P, Phillips, C, Pike, A.C.W, Elkins, J.M, Gileadi, C, Salah, E, Niesen, F.H, Burgess, N, Gileadi, O, Gorrec, F, Umeano, C, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C.H, Sundstrom, M, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2007-02-28
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of human synapsin III (SYN3) in complex with AMPPNP
To be Published
2P1G
DownloadVisualize
BU of 2p1g by Molmil
Crystal structure of a putative xylanase from Bacteroides fragilis
Descriptor: Putative xylanase
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Zhang, F, Sridhar, V, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-05
Release date:2007-03-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a putative xylanase from Bacteroides fragilis
To be Published
2P5Z
DownloadVisualize
BU of 2p5z by Molmil
The E. coli c3393 protein is a component of the type VI secretion system and exhibits structural similarity to T4 bacteriophage tail proteins gp27 and gp5
Descriptor: Type VI secretion system component
Authors:Ramagopal, U.A, Bonanno, J.B, Sridhar, V, Lau, C, Toro, R, Gheyi, T, Maletic, M, Freeman, J.C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-16
Release date:2007-04-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin.
Proc.Natl.Acad.Sci.Usa, 106, 2009
2PJD
DownloadVisualize
BU of 2pjd by Molmil
Crystal structure of 16S rRNA methyltransferase RsmC
Descriptor: Ribosomal RNA small subunit methyltransferase C
Authors:Sunita, S, Purta, E, Durawa, M, Tkaczuk, K.L, Bujnicki, J.M, Sivaraman, J.
Deposit date:2007-04-16
Release date:2007-07-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC
Nucleic Acids Res., 35, 2007
2PFP
DownloadVisualize
BU of 2pfp by Molmil
DNA Polymerase lambda in complex with DNA and dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ...
Authors:Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A.
Deposit date:2007-04-05
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Role of the catalytic metal during polymerization by DNA polymerase lambda.
DNA Repair, 6, 2007
2PNE
DownloadVisualize
BU of 2pne by Molmil
Crystal Structure of the Snow Flea Antifreeze Protein
Descriptor: 6.5 kDa glycine-rich antifreeze protein
Authors:Pentelute, B.L, Kent, S.B.H, Gates, Z.P, Tereshko, V, Kossiakoff, A.A, Kurutz, J, Dashnau, J, Vaderkooi, J.M.
Deposit date:2007-04-24
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:X-ray structure of snow flea antifreeze protein determined by racemic crystallization of synthetic protein enantiomers
J.Am.Chem.Soc., 130, 2008

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon