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PDB: 5628 results

3V8E
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Crystal structure of the yeast nicotinamidase Pnc1p bound to the inhibitor nicotinaldehyde
Descriptor: MAGNESIUM ION, Nicotinamidase, ZINC ION
Authors:Hoadley, K.A, Smith, B.C, Denu, J.M, Keck, J.L.
Deposit date:2011-12-22
Release date:2012-01-25
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural and Kinetic Isotope Effect Studies of Nicotinamidase (Pnc1) from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
3VK1
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Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5
Descriptor: CHLORIDE ION, GFP-like non-fluorescent chromoprotein, IODIDE ION
Authors:Battad, J.M, Traore, D.A.K, Wilce, M, Byres, M, Rossjohn, J, Devenish, R.J, Prescott, M.
Deposit date:2011-11-07
Release date:2012-06-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Green Fluorescent Protein Containing a QFG Tri-Peptide Chromophore: Optical Properties and X-Ray Crystal Structure.
Plos One, 7, 2012
1G1Z
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NMR Solution Structures of delta-Conotoxin EVIA from Conus ermineus that Selectively Acts on Vertebrate Neuronal Na+ Channels, LEU12-PRO13 Cis isomer
Descriptor: CONOTOXIN EVIA
Authors:Volpon, L, Lamthanh, H, Le Gall, F, Menez, A, Lancelin, J.M.
Deposit date:2000-10-16
Release date:2000-11-01
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR Solution Structures of delta-Conotoxin EVIA from Conus ermineus That Selectively Acts on Vertebrate Neuronal Na+ Channels.
J.Biol.Chem., 279, 2004
1G4D
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NMR STRUCTURE OF THE MU BACTERIOPHAGE REPRESSOR DNA-BINDING DOMAIN/DNA COMPLEX
Descriptor: 5'-D(P*CP*AP*GP*AP*TP*TP*AP*CP*TP*GP*AP*AP*AP*AP*GP*G)-3', 5'-D(P*CP*CP*TP*TP*TP*TP*CP*AP*GP*TP*AP*AP*TP*CP*TP*G)-3', REPRESSOR PROTEIN C
Authors:Wojciak, J.M, Iwahara, J, Clubb, R.T.
Deposit date:2000-10-26
Release date:2000-11-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The Mu repressor-DNA complex contains an immobilized 'wing' within the minor groove.
Nat.Struct.Biol., 8, 2001
2UYX
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metallo-beta-lactamase (1BC2) single point mutant D120S
Descriptor: BETA-LACTAMASE II, GLYCEROL, ZINC ION
Authors:Larrull, L.I, Fabiane, S.M, Kowalski, J.M, Bennett, B, Sutton, B.J, Vila, A.J.
Deposit date:2007-04-20
Release date:2007-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Asp-120 locates Zn2 for optimal metallo-beta-lactamase activity.
J. Biol. Chem., 282, 2007
2AKZ
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BU of 2akz by Molmil
Fluoride Inhibition of Enolase: Crystal Structure of the Inhibitory Complex
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FLUORIDE ION, Gamma enolase, ...
Authors:Qin, J, Chai, G, Brewer, J.M, Lovelace, L.L.
Deposit date:2005-08-04
Release date:2006-03-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Fluoride inhibition of enolase: crystal structure and thermodynamics
Biochemistry, 45, 2006
2UWC
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Crystal structure of Nasturtium xyloglucan hydrolase isoform NXG2
Descriptor: CELLULASE
Authors:Baumann, M.J, Eklof, J.M, Michel, G, Kallas, A, Teeri, T.T, Brumer, H, Czjzek, M.
Deposit date:2007-03-20
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
2AM4
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Crystal Structure of N-Acetylglucosaminyltransferase I in Complex with UDP-2-deoxy-2-fluoro-glucose
Descriptor: Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, GLYCEROL, MANGANESE (II) ION, ...
Authors:Rini, J.M, Gordon, R.D.
Deposit date:2005-08-08
Release date:2006-06-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray Crystal Structures of Rabbit N-acetylglucosaminyltransferase I (GnT I) in Complex with Donor Substrate Analogues.
J.Mol.Biol., 360, 2006
4JXS
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X-ray crystal structure of AmpC beta-lactamase from E. coli in complex with a non-covalent inhibitor 3-[(4-CARBOXYBENZYL)SULFAMOYL]THIOPHENE-2-CARBOXYLIC ACID (compound 4)
Descriptor: 3-[(4-carboxybenzyl)sulfamoyl]thiophene-2-carboxylic acid, Beta-lactamase, PHOSPHATE ION
Authors:Powers, R.A, Hendershot, J.M.
Deposit date:2013-03-28
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based efforts to optimize a non-beta-lactam inhibitor of AmpC beta-lactamase.
Bioorg.Med.Chem., 22, 2014
2BWW
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His350Ala Escherichia coli Aminopeptidase P
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, AMINOPEPTIDASE P, CITRATE ANION, ...
Authors:Graham, S.C, Guss, J.M.
Deposit date:2005-07-19
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Kinetic and Crystallographic Analysis of Mutant Escherichia Coli Aminopeptidase P: Insights Into Substrate Recognition and the Mechanism of Catalysis.
Biochemistry, 45, 2006
3VVB
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Crystal Structure of Capsular Polysaccharide Synthesizing Enzyme CapE from Staphylococcus aureus in apo form
Descriptor: CapE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Miyafusa, T, Caaveiro, J.M, Tanaka, Y, Tsumoto, K.
Deposit date:2012-07-18
Release date:2013-06-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the capsular polysaccharide synthesizing protein CapE of Staphylococcus aureus.
Biosci.Rep., 33, 2013
2BWT
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Asp260Ala Escherichia coli Aminopeptidase P
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRATE ANION, MAGNESIUM ION, ...
Authors:Graham, S.C, Guss, J.M.
Deposit date:2005-07-19
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Kinetic and Crystallographic Analysis of Mutant Escherichia Coli Aminopeptidase P: Insights Into Substrate Recognition and the Mechanism of Catalysis.
Biochemistry, 45, 2006
2BWS
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His243Ala Escherichia coli Aminopeptidase P
Descriptor: CHLORIDE ION, MANGANESE (II) ION, XAA-PRO AMINOPEPTIDASE P
Authors:Graham, S.C, Guss, J.M.
Deposit date:2005-07-19
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Kinetic and Crystallographic Analysis of Mutant Escherichia Coli Aminopeptidase P: Insights Into Substrate Recognition and the Mechanism of Catalysis.
Biochemistry, 45, 2006
3UJB
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BU of 3ujb by Molmil
Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with SAH and phosphoethanolamine
Descriptor: PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, Phosphoethanolamine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Lee, S.G, Kim, Y, Alpert, T.D, Nagata, A, Jez, J.M.
Deposit date:2011-11-07
Release date:2011-11-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.521 Å)
Cite:Structure and reaction mechanism of phosphoethanolamine methyltransferase from the malaria parasite Plasmodium falciparum: an antiparasitic drug target.
J.Biol.Chem., 287, 2012
2C23
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BU of 2c23 by Molmil
14-3-3 Protein Beta (Human) in complex with exoenzyme S peptide
Descriptor: 14-3-3 BETA/ALPHA, EXOENZYME S PEPTIDE
Authors:Elkins, J.M, Schoch, G.A, Yang, X, Sundstrom, M, Arrowsmith, C, Edwards, A, Doyle, D.A.
Deposit date:2005-09-26
Release date:2005-09-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Basis for Protein-Protein Interactions in the 14-3-3 Protein Family.
Proc.Natl.Acad.Sci.USA, 103, 2006
3USQ
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Structure of D159S/Y194F glycogenin mutant truncated at residue 270
Descriptor: CHLORIDE ION, GLYCEROL, Glycogenin-1
Authors:Issoglio, F.M, Carrizo, M.E, Romero, J.M, Curtino, J.A.
Deposit date:2011-11-23
Release date:2011-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanisms of monomeric and dimeric glycogenin autoglucosylation.
J.Biol.Chem., 287, 2012
2BH3
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Zn substituted E. coli Aminopeptidase P in complex with product
Descriptor: CITRATE ANION, LEUCINE, MAGNESIUM ION, ...
Authors:Graham, S.C, Bond, C.S, Freeman, H.C, Guss, J.M.
Deposit date:2005-01-07
Release date:2005-09-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center.
Biochemistry, 44, 2005
3UC1
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Mycobacterium tuberculosis gyrase type IIA topoisomerase C-terminal domain
Descriptor: ACETATE ION, CALCIUM ION, DNA gyrase subunit A, ...
Authors:Tretter, E.M, Berger, J.M.
Deposit date:2011-10-25
Release date:2012-03-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanisms for Defining Supercoiling Set Point of DNA Gyrase Orthologs: II. THE SHAPE OF THE GyrA SUBUNIT C-TERMINAL DOMAIN (CTD) IS NOT A SOLE DETERMINANT FOR CONTROLLING SUPERCOILING EFFICIENCY.
J.Biol.Chem., 287, 2012
2ARO
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Crystal Structure Of The Native Histone Octamer To 2.1 Angstrom Resolution, Crystalised In The Presence Of S-Nitrosoglutathione
Descriptor: CHLORIDE ION, HISTONE H3, HISTONE H4-VI, ...
Authors:Wood, C.M, Sodngam, S, Nicholson, J.M, Lambert, S.J, Reynolds, C.D, Baldwin, J.P.
Deposit date:2005-08-20
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The oxidised histone octamer does not form a H3 disulphide bond.
Biochim.Biophys.Acta, 1764, 2006
3UEH
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Crystal structure of human Survivin H80A mutant
Descriptor: 1,2-ETHANEDIOL, Baculoviral IAP repeat-containing protein 5, DI(HYDROXYETHYL)ETHER, ...
Authors:Niedzialkowska, E, Porebski, P.J, Wang, F, Higgins, J.M, Stukenberg, P.T, Minor, W.
Deposit date:2011-10-30
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres.
Mol Biol Cell, 23, 2012
1HQ3
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CRYSTAL STRUCTURE OF THE HISTONE-CORE-OCTAMER IN KCL/PHOSPHATE
Descriptor: CHLORIDE ION, HISTONE H2A-IV, HISTONE H2B, ...
Authors:Chantalat, L, Nicholson, J.M, Lambert, S.J, Reid, A.J, Donovan, M.J, Reynolds, C.D, Wood, C.M, Baldwin, J.P.
Deposit date:2000-12-14
Release date:2001-01-24
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the histone-core octamer in KCl/phosphate crystals at 2.15 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
2ATY
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BU of 2aty by Molmil
Complement receptor chimaeric conjugate CR2-Ig
Descriptor: Complement receptor chimeric conjugate CR2-Ig
Authors:Gilbert, H.E, Aslam, M, Guthridge, J.M, Holers, V.M, Perkins, S.J.
Deposit date:2005-08-26
Release date:2006-01-31
Last modified:2024-02-14
Method:SOLUTION SCATTERING
Cite:Extended Flexible Linker Structures in the Complement Chimaeric Conjugate CR2-Ig by Scattering, Analytical Ultracentrifugation and Constrained Modelling: Implications for Function and Therapy.
J.Mol.Biol., 356, 2006
2AU1
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Crystal Structure of group A Streptococcus MAC-1 orthorhombic form
Descriptor: BETA-MERCAPTOETHANOL, IgG-degrading protease
Authors:Agniswamy, J, Nagiec, M.J, Liu, M, Schuck, P, Musser, J.M, Sun, P.D.
Deposit date:2005-08-26
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of group a streptococcus mac-1: insight into dimer-mediated specificity for recognition of human IgG.
Structure, 14, 2006
4L9S
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BU of 4l9s by Molmil
Crystal Structure of H-Ras G12C, GDP-bound
Descriptor: CALCIUM ION, GTPase HRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-06-18
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.606 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
4JO8
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Crystal structure of the activating Ly49H receptor in complex with m157 (G1F strain)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Killer cell lectin-like receptor 8, M157
Authors:Berry, R, Ng, N, Saunders, P.M, Vivian, J.P, Lin, J, Deuss, F.A, Corbett, A.J, Forbes, C.A, Widjaja, J.M, Sullivan, L.C, McAlister, A.D, Perugini, M.A, Call, M.J, Scalzo, A.A, Degli-Esposti, M.A, Coudert, J.D, Beddoe, T, Brooks, A.G, Rossjohn, J.
Deposit date:2013-03-18
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Targeting of a natural killer cell receptor family by a viral immunoevasin
Nat.Immunol., 14, 2013

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