Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5628 results

4M0A
DownloadVisualize
BU of 4m0a by Molmil
Human DNA Polymerase Mu post-catalytic complex
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA-directed DNA/RNA polymerase mu, ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2013-08-01
Release date:2014-02-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Sustained active site rigidity during synthesis by human DNA polymerase mu.
Nat.Struct.Mol.Biol., 21, 2014
4M21
DownloadVisualize
BU of 4m21 by Molmil
Crystal Structure of small molecule acrylamide 11 covalently bound to K-Ras G12C
Descriptor: 1-(4-{[(4,5-dichloro-2-methoxyphenyl)amino]acetyl}piperazin-1-yl)propan-1-one, GUANOSINE-5'-DIPHOSPHATE, K-Ras GTPase
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-08-05
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
2B3V
DownloadVisualize
BU of 2b3v by Molmil
Spermine spermidine acetyltransferase in complex with acetylcoa, K26R mutant
Descriptor: ACETYL COENZYME *A, Diamine acetyltransferase 1
Authors:Bewley, M.C, Graziano, V, Jiang, J.S, Matz, E, Studier, F.W, Pegg, A.P, Coleman, C.S, Flanagan, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-09-21
Release date:2006-01-17
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of wild-type and mutant human spermidine/spermine N1-acetyltransferase, a potential therapeutic drug target.
Proc.Natl.Acad.Sci.USA, 103, 2006
2B3U
DownloadVisualize
BU of 2b3u by Molmil
Human Spermine spermidine acetyltransferase K26R mutant
Descriptor: Diamine acetyltransferase 1, SULFATE ION
Authors:Bewley, M.C, Graziano, V, Jiang, J.S, Matz, E, Studier, F.W, Pegg, A.P, Coleman, C.S, Flanagan, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-09-21
Release date:2006-01-17
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of wild-type and mutant human spermidine/spermine N1-acetyltransferase, a potential therapeutic drug target.
Proc.Natl.Acad.Sci.USA, 103, 2006
2B4B
DownloadVisualize
BU of 2b4b by Molmil
SSAT+COA+BE-3-3-3, K26R mutant
Descriptor: COENZYME A, Diamine acetyltransferase 1, N-ETHYL-N-[3-(PROPYLAMINO)PROPYL]PROPANE-1,3-DIAMINE
Authors:Bewley, M.C, Graziano, V, Jiang, J.S, Matz, E, Studier, F.W, Pegg, A.P, Coleman, C.S, Flanagan, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-09-23
Release date:2006-01-17
Last modified:2023-05-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of wild-type and mutant human spermidine/spermine N1-acetyltransferase, a potential therapeutic drug target
Proc.Natl.Acad.Sci.Usa, 103, 2006
2B6F
DownloadVisualize
BU of 2b6f by Molmil
Solution structure of human sulfiredoxin (SRX)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Sulfiredoxin
Authors:Gruschus, J.M, Lee, D.-Y, Ferretti, J.A, Rhee, S.G.
Deposit date:2005-10-01
Release date:2006-09-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Mutagenesis and Modeling of the Peroxiredoxin (Prx) Complex with the NMR Structure of ATP-Bound Human Sulfiredoxin Implicate Aspartate 187 of Prx I as the Catalytic Residue in ATP Hydrolysis
Biochemistry, 45, 2006
2B8Q
DownloadVisualize
BU of 2b8q by Molmil
X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with TDP
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Probable nucleoside diphosphate kinase, ...
Authors:Jeudy, S, Claverie, J.M, Abergel, C.
Deposit date:2005-10-10
Release date:2005-11-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
1CLP
DownloadVisualize
BU of 1clp by Molmil
CRYSTAL STRUCTURE OF A CALCIUM-INDEPENDENT PHOSPHOLIPASELIKE MYOTOXIC PROTEIN FROM BOTHROPS ASPER VENOM
Descriptor: MYOTOXIN II
Authors:Arni, R.K, Ward, R.J, Gutierrez, J.M, Tulinsky, A.
Deposit date:1994-09-12
Release date:1994-11-30
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a calcium-independent phospholipase-like myotoxic protein from Bothrops asper venom.
Acta Crystallogr.,Sect.D, 51, 1995
1K07
DownloadVisualize
BU of 1k07 by Molmil
Native FEZ-1 metallo-beta-lactamase from Legionella gormanii
Descriptor: ACETATE ION, FEZ-1 beta-lactamase, GLYCEROL, ...
Authors:Garcia-Saez, I, Mercuri, P.S, Kahn, R, Papamicael, C, Frere, J.M, Galleni, M, Dideberg, O.
Deposit date:2001-09-18
Release date:2003-01-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Three-dimensional Structure of FEZ-1, a Monomeric Subclass B3 Metallo-[beta]-lactamase from Fluoribacter gormanii, in Native Form and in Complex with -Captopril
J.MOL.BIOL., 325, 2003
3VBE
DownloadVisualize
BU of 3vbe by Molmil
Crystal structure of beta-cyanoalanine synthase in soybean
Descriptor: PYRIDOXAL-5'-PHOSPHATE, beta-cyanoalnine synthase
Authors:Yi, H, Jez, J.M.
Deposit date:2012-01-02
Release date:2012-09-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Soybean beta-Cyanoalanine Synthase and the Molecular Basis for Cyanide Detoxification in Plants.
Plant Cell, 24, 2012
2BBS
DownloadVisualize
BU of 2bbs by Molmil
Human deltaF508 NBD1 with three solubilizing mutations
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Lewis, H.A, Kearins, M.C, Conners, K, Zhao, X, Lu, F, Sauder, J.M, Emtage, S.
Deposit date:2005-10-17
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure and dynamics of NBD1 from CFTR characterized using crystallography and hydrogen/deuterium exchange mass spectrometry.
J.Mol.Biol., 396, 2010
4LYF
DownloadVisualize
BU of 4lyf by Molmil
Crystal Structure of small molecule vinylsulfonamide 8 covalently bound to K-Ras G12C
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, N-{1-[N-(4,5-dichloro-2-hydroxyphenyl)glycyl]piperidin-4-yl}ethanesulfonamide
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-07-31
Release date:2013-11-27
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.568 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
1JVP
DownloadVisualize
BU of 1jvp by Molmil
Crystal structure of human CDK2 (unphosphorylated) in complex with PKF049-365
Descriptor: 3-pyridin-4-yl-2,4-dihydroindeno[1,2-c]pyrazole, Cell division protein kinase 2
Authors:Rondeau, J.M.
Deposit date:2001-08-31
Release date:2001-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure-based design and protein X-ray analysis of a protein kinase inhibitor.
Bioorg.Med.Chem.Lett., 12, 2002
3VJF
DownloadVisualize
BU of 3vjf by Molmil
Crystal structure of de novo 4-helix bundle protein WA20
Descriptor: POTASSIUM ION, WA20
Authors:Arai, R, Kimura, A, Kobayashi, N, Matsuo, K, Sato, T, Wang, A.F, Platt, J.M, Bradley, L.H, Hecht, M.H.
Deposit date:2011-10-18
Release date:2012-03-28
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Domain-swapped dimeric structure of a stable and functional de novo four-helix bundle protein, WA20
J.Phys.Chem.B, 116, 2012
1K2B
DownloadVisualize
BU of 1k2b by Molmil
Combining Mutations in HIV-1 Protease to Understand Mechanisms of Resistance
Descriptor: N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide, PROTEASE RETROPEPSIN
Authors:Mahalingam, B, Boross, P, Wang, Y.-F, Louis, J.M, Fischer, C, Tozser, J, W Harrison, R, Weber, I.T.
Deposit date:2001-09-26
Release date:2002-07-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Combining mutations in HIV-1 protease to understand mechanisms of resistance.
Proteins, 48, 2002
4M1W
DownloadVisualize
BU of 4m1w by Molmil
Crystal Structure of small molecule vinylsulfonamide covalently bound to K-Ras G12C
Descriptor: GUANOSINE-5'-DIPHOSPHATE, K-Ras GTPase, MAGNESIUM ION, ...
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-08-04
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
2CFK
DownloadVisualize
BU of 2cfk by Molmil
AGAO in complex with wc5 (Ru-wire inhibitor, 5-carbon linker)
Descriptor: COPPER (II) ION, GLYCEROL, PHENYLETHYLAMINE OXIDASE, ...
Authors:Langley, D.B, Duff, A.P, Freeman, H.C, Guss, J.M, Juda, G.A, Dooley, D.M, Contakes, S.M, Halpern-Manners, N.W, Dunn, A.R, Gray, H.B.
Deposit date:2006-02-21
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Enantiomer-specific binding of ruthenium(II) molecular wires by the amine oxidase of Arthrobacter globiformis.
J. Am. Chem. Soc., 130, 2008
1JRQ
DownloadVisualize
BU of 1jrq by Molmil
X-ray Structure Analysis of the Role of the Conserved Tyrosine-369 in Active Site of E. coli Amine Oxidase
Descriptor: CALCIUM ION, COPPER (II) ION, Copper amine oxidase
Authors:Murray, J.M, Kurtis, C.R, Tambarajah, W, Saysell, C.G, Wilmot, C.M, Parsons, M.R, Phillips, S.E.V, Knowles, P.F, McPherson, M.J.
Deposit date:2001-08-14
Release date:2001-11-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Conserved tyrosine-369 in the active site of Escherichia coli copper amine oxidase is not essential.
Biochemistry, 40, 2001
1K4F
DownloadVisualize
BU of 1k4f by Molmil
CRYSTAL STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-10 AT 1.6 A RESOLUTION
Descriptor: Beta-lactamase PSE-2, SULFATE ION
Authors:Kerff, F, Fonze, E, Bouillene, F, Frere, J.M, Charlier, P.
Deposit date:2001-10-08
Release date:2001-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the class D beta-lactamase OXA-2
To be Published
1K64
DownloadVisualize
BU of 1k64 by Molmil
NMR Structue of alpha-conotoxin EI
Descriptor: alpha-conotoxin EI
Authors:Park, K.H, Suk, J.E, Jacobsen, R, Gray, W.R, McIntosh, J.M, Han, K.H.
Deposit date:2001-10-15
Release date:2003-09-09
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution conformation of alpha-conotoxin EI, a neuromuscular toxin specific for the alpha 1/delta subunit interface of torpedo nicotinic acetylcholine receptor
J.BIOL.CHEM., 276, 2001
1FSL
DownloadVisualize
BU of 1fsl by Molmil
FERRIC SOYBEAN LEGHEMOGLOBIN COMPLEXED WITH NICOTINATE
Descriptor: LEGHEMOGLOBIN A, NICOTINIC ACID, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ellis, P.J, Guss, J.M, Freeman, H.C.
Deposit date:1995-12-12
Release date:1996-06-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of ferric soybean leghemoglobin a nicotinate at 2.3 A resolution.
Acta Crystallogr.,Sect.D, 53, 1997
1KAC
DownloadVisualize
BU of 1kac by Molmil
KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12 IN COMPLEX WITH DOMAIN 1 OF ITS CELLULAR RECEPTOR CAR
Descriptor: PROTEIN (COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR), PROTEIN (FIBER KNOB PROTEIN)
Authors:Bewley, M.C, Springer, K, Zhang, Y.B, Freimuth, P, Flanagan, J.M.
Deposit date:1999-05-05
Release date:1999-11-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the mechanism of adenovirus binding to its human cellular receptor, CAR.
Science, 286, 1999
1TZQ
DownloadVisualize
BU of 1tzq by Molmil
Crystal structure of the equinatoxin II 8-69 double cysteine mutant
Descriptor: Equinatoxin II
Authors:Kristan, K, Podlesek, Z, Hojnik, V, Gutirrez-Aguirre, I, Guncar, G, Turk, D.A, Gonzalez-Maas, J.M, Lakey, J.H, Anderluh, G.
Deposit date:2004-07-11
Release date:2004-09-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Pore formation by equinatoxin, a eukaryotic pore-forming toxin, requires a flexible N-terminal region and a stable beta-sandwich
J.Biol.Chem., 279, 2004
1K6S
DownloadVisualize
BU of 1k6s by Molmil
STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-10 IN COMPLEX WITH A PHENYLBORONIC ACID
Descriptor: 4-IODO-ACETAMIDO PHENYLBORONIC ACID, Beta-lactamase PSE-2, CALCIUM ION, ...
Authors:Kerff, F, Fonze, E, Sauvage, E, Frere, J.M, Charlier, P.
Deposit date:2001-10-17
Release date:2003-06-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:CRYSTAL STRUCTURE OF CLASS D BETA-LACTAMASE OXA-10 IN COMPLEX WITH DIFFERENT SUBSTRATES AND ONE INHIBITOR.
To be Published
1K6R
DownloadVisualize
BU of 1k6r by Molmil
STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-10 IN COMPLEX WITH MOXALACTAM
Descriptor: (2R)-2-((R)-CARBOXY{[CARBOXY(4-HYDROXYPHENYL)ACETYL]AMINO}METHOXYMETHYL)-5-METHYLENE-5,6-DIHYDRO-2H-1,3-OXAZINE-4-CARBO XYLIC ACID, Beta-lactamase PSE-2
Authors:Kerff, F, Fonze, E, Sauvage, E, Frere, J.M, Charlier, P.
Deposit date:2001-10-17
Release date:2003-06-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CRYSTAL STRUCTURE OF CLASS D BETA-LACTAMASE OXA-10 IN COMPLEX WITH DIFFERENT SUBSTRATES AND ONE INHIBITOR.
To be Published

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon