Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5628 件

1W4A
DownloadVisualize
BU of 1w4a by Molmil
P4 protein from PHI12 in complex with AMPcPP and Mn
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MANGANESE (II) ION, NTPASE P4
著者Mancini, E.J, Kainov, D.E, Grimes, J.M, Tuma, R, Bamford, D.H, Stuart, D.I.
登録日2004-07-22
公開日2004-10-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Atomic Snapshots of an RNA Packaging Motor Reveal Conformational Changes Linking ATP Hydrolysis to RNA Translocation
Cell(Cambridge,Mass.), 118, 2004
8DKB
DownloadVisualize
BU of 8dkb by Molmil
Crystal Structure of human YEATS4 in complex with Pfizer small molecule compound 3b
分子名称: N-ethyl-1-{(3S,4S)-1-[(1-hydroxycyclohexyl)methyl]-3-methylpiperidin-4-yl}-2-methyl-1H-benzimidazole-5-carboxamide, YEATS domain-containing protein 4
著者Dias, J.M, Byrnes, L.J, Varghese, A.H.
登録日2022-07-05
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Discovery of High-Affinity Small-Molecule Binders of the Epigenetic Reader YEATS4.
J.Med.Chem., 66, 2023
8DBE
DownloadVisualize
BU of 8dbe by Molmil
Human PRPS1 with ADP; Hexamer
分子名称: 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBF
DownloadVisualize
BU of 8dbf by Molmil
Human PRPS1 with ADP; Filament Interface
分子名称: 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBO
DownloadVisualize
BU of 8dbo by Molmil
Human PRPS1-E307A engineered mutation with ADP; Hexamer
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBG
DownloadVisualize
BU of 8dbg by Molmil
Human PRPS1 with Phosphate and ATP; Hexamer
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8CTP
DownloadVisualize
BU of 8ctp by Molmil
Crystal structure of engineered phospholipase D mutant superPLD 2-23
分子名称: PHOSPHATE ION, Phospholipase D
著者Tei, R, Bagde, S.R, Fromme, J.C, Baskin, J.M.
登録日2022-05-16
公開日2023-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Activity-based directed evolution of a membrane editor in mammalian cells.
Nat.Chem., 15, 2023
1WO3
DownloadVisualize
BU of 1wo3 by Molmil
Solution structure of Minimal Mutant 1 (MM1): Multiple alanine mutant of non-native CHANCE domain
分子名称: CREB Binding Protein, ZINC ION
著者Sharpe, B.K, Liew, C.K, Wilce, J.A, Crossley, M, Matthews, J.M, Mackay, J.P.
登録日2004-08-12
公開日2005-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Assessment of the robustness of a serendipitous zinc binding fold: mutagenesis and protein grafting
Structure, 13, 2005
8D7M
DownloadVisualize
BU of 8d7m by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
分子名称: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7O
DownloadVisualize
BU of 8d7o by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
分子名称: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7P
DownloadVisualize
BU of 8d7p by Molmil
Human Casein kinase 1 delta in complex with phosphorylated Drosophila PERIOD peptide
分子名称: Casein kinase I isoform delta, Period circadian protein peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7N
DownloadVisualize
BU of 8d7n by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
分子名称: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
5CIL
DownloadVisualize
BU of 5cil by Molmil
Crystal Structure of non-neutralizing version of 4E10 (WDWD) with epitope bound
分子名称: ACETATE ION, CHLORIDE ION, FAB 4E10 HEAVY CHAIN, ...
著者Caaveiro, J.M.M, Rujas, E, Nieva, J.L, Tsumoto, K.
登録日2015-07-13
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural and Thermodynamic Basis of Epitope Binding by Neutralizing and Nonneutralizing Forms of the Anti-HIV-1 Antibody 4E10
J.Virol., 89, 2015
1WO6
DownloadVisualize
BU of 1wo6 by Molmil
Solution structure of Designed Functional Finger 5 (DFF5): Designed mutant based on non-native CHANCE domain
分子名称: CREB Binding Protein, ZINC ION
著者Sharpe, B.K, Liew, C.K, Wilce, J.A, Crossley, M, Matthews, J.M, Mackay, J.P.
登録日2004-08-12
公開日2005-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Assessment of the robustness of a serendipitous zinc binding fold: mutagenesis and protein grafting
Structure, 13, 2005
1WPD
DownloadVisualize
BU of 1wpd by Molmil
Evidence for domain-specific recognition of SK and Kv channels by MTX and HsTx1 scorpion toxins
分子名称: Potassium channel toxin alpha-KTx 6.2,Potassium channel toxin alpha-KTx 6.3
著者Regaya, I, Beeton, C, Ferrat, G, Andreotti, N, Chandy, G.K, Darbon, H, De Waard, M, Sabatier, J.M.
登録日2004-09-01
公開日2004-10-19
最終更新日2019-12-18
実験手法SOLUTION NMR
主引用文献Evidence for domain-specific recognition of SK and Kv channels by MTX and HsTx1 scorpion toxins
J.Biol.Chem., 279, 2004
8CXC
DownloadVisualize
BU of 8cxc by Molmil
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
分子名称: 3F2 Antibody heavy chain, 3F2 Antibody light chain, Mesothelin, ...
著者Bandaranayake, A.D, Rupert, P.B, Lin, I, Pilat, K, Ruff, R.O, Friend, D.J, Chan, M.K, Clarke, M, Carter, J, Meshinchi, S, Mehlin, C, Olson, J.M, Strong, R.K, Correnti, C.E.
登録日2022-05-20
公開日2023-06-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (4.31 Å)
主引用文献Novel mesothelin antibodies enable crystallography of the intact mesothelin ectodomain and engineering of potent, T cell-engaging bispecific therapeutics
Front. Drug Discov., 3, 2023
8DGN
DownloadVisualize
BU of 8dgn by Molmil
14-3-3 epsilon bound to phosphorylated PEAK2 (pS826) peptide
分子名称: 14-3-3 protein epsilon, Phosphorylated PEAK2 (pS826) peptide
著者Roy, M.J, Hardy, J.M, Lucet, I.S.
登録日2022-06-24
公開日2023-06-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Structural mapping of PEAK pseudokinase interactions identifies 14-3-3 as a molecular switch for PEAK3 signaling.
Nat Commun, 14, 2023
5CIP
DownloadVisualize
BU of 5cip by Molmil
Crystal Structure of Unbound 4E10
分子名称: FAB 4E10 HEAVY CHAIN, FAB 4E10 LIGHT CHAIN
著者Caaveiro, J.M.M, Rujas, E, Nieva, J.L, Tsumoto, K.
登録日2015-07-13
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural and Thermodynamic Basis of Epitope Binding by Neutralizing and Nonneutralizing Forms of the Anti-HIV-1 Antibody 4E10
J.Virol., 89, 2015
1X3Z
DownloadVisualize
BU of 1x3z by Molmil
Structure of a peptide:N-glycanase-Rad23 complex
分子名称: UV excision repair protein RAD23, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
著者Lee, J.-H, Choi, J.M, Lee, C, Yi, K.J, Cho, Y.
登録日2005-05-11
公開日2005-06-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
8DGM
DownloadVisualize
BU of 8dgm by Molmil
14-3-3 epsilon bound to phosphorylated PEAK1 (pT1165) peptide
分子名称: 1,2-ETHANEDIOL, 14-3-3 protein epsilon, Inactive tyrosine-protein kinase PEAK1
著者Roy, M.J, Hardy, J.M, Lucet, I.S.
登録日2022-06-24
公開日2023-06-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural mapping of PEAK pseudokinase interactions identifies 14-3-3 as a molecular switch for PEAK3 signaling.
Nat Commun, 14, 2023
8CYH
DownloadVisualize
BU of 8cyh by Molmil
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, A12 antibody heavy chain, A12 antibody light chain, ...
著者Bandaranayake, A.D, Rupert, P.B, Lin, I, Pilat, K, Ruff, R.O, Friend, D.J, Chan, M.K, Clarke, M, Carter, J, Meshinchi, S, Mehlin, C, Olson, J.M, Strong, R.K, Correnti, C.E.
登録日2022-05-23
公開日2023-06-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.38 Å)
主引用文献Novel mesothelin antibodies enable crystallography of the intact mesothelin ectodomain and engineering of potent, T cell-engaging bispecific therapeutics
Front. Drug Discov., 3, 2023
8DGO
DownloadVisualize
BU of 8dgo by Molmil
Growth Factor Receptor-Bound Protein 2 (Grb2) bound to phosphorylated PEAK3 (pY24) peptide
分子名称: Growth factor receptor bound protein 2, Phosphorylated PEAK3 (pY24) peptide
著者Roy, M.J, Hardy, J.M, Lucet, I.S.
登録日2022-06-24
公開日2023-06-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural mapping of PEAK pseudokinase interactions identifies 14-3-3 as a molecular switch for PEAK3 signaling.
Nat Commun, 14, 2023
8CZ8
DownloadVisualize
BU of 8cz8 by Molmil
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
分子名称: Mesothelin, cleaved form, SULFATE ION, ...
著者Bandaranayake, A.D, Rupert, P.B, Lin, I, Pilat, K, Ruff, R.O, Friend, D.J, Chan, M.K, Clarke, M, Carter, J, Meshinchi, S, Mehlin, C, Olson, J.M, Strong, R.K, Correnti, C.E.
登録日2022-05-24
公開日2023-06-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Novel mesothelin antibodies enable crystallography of the intact mesothelin ectodomain and engineering of potent, T cell-engaging bispecific therapeutics
Front. Drug Discov., 3, 2023
8DGP
DownloadVisualize
BU of 8dgp by Molmil
14-3-3 epsilon bound to phosphorylated PEAK3 (pS69) peptide
分子名称: 1,2-ETHANEDIOL, 14-3-3 protein epsilon, Phosphorylated PEAK3 (pS69) peptide, ...
著者Roy, M.J, Hardy, J.M, Lucet, I.S.
登録日2022-06-24
公開日2023-06-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural mapping of PEAK pseudokinase interactions identifies 14-3-3 as a molecular switch for PEAK3 signaling.
Nat Commun, 14, 2023
1WL6
DownloadVisualize
BU of 1wl6 by Molmil
Mg-substituted form of E. coli aminopeptidase P
分子名称: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, CHLORIDE ION, ISOPROPYL ALCOHOL, ...
著者Graham, S.C, Bond, C.S, Freeman, H.C, Guss, J.M.
登録日2004-06-21
公開日2005-08-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional implications of metal ion selection in aminopeptidase p, a metalloprotease with a dinuclear metal center
Biochemistry, 44, 2005

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon