Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5628 件

2PZS
DownloadVisualize
BU of 2pzs by Molmil
Phi29 DNA polymerase complexed with primer-template DNA (post-translocation binary complex)
分子名称: 5'-d(CTAACACGTAAGCAGTC)-3', 5'-d(GACTGCTTAC)-3', DNA polymerase
著者Berman, A.J, Kamtekar, S, Goodman, J.L, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
登録日2007-05-18
公開日2007-07-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases
Embo J., 26, 2007
2CJK
DownloadVisualize
BU of 2cjk by Molmil
Structure of the RNA binding domain of Hrp1 in complex with RNA
分子名称: 5'-R(*UP*AP*UP*AP*UP*AP*UP*AP)-3', NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 4
著者Perez-Canadillas, J.M.
登録日2006-04-04
公開日2006-06-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Grabbing the message: structural basis of mRNA 3'UTR recognition by Hrp1.
EMBO J., 25, 2006
4LN8
DownloadVisualize
BU of 4ln8 by Molmil
The crystal structure of hemagglutinin from a h7n9 influenza virus (a/shanghai/2/2013) in complex with lstb
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Hemagglutinin, ...
著者Yang, H, Carney, P.J, Chang, J.C, Villanueva, J.M, Stevens, J.
登録日2013-07-11
公開日2013-10-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Analysis of the Hemagglutinin from the Recent 2013 H7N9 Influenza Virus.
J.Virol., 87, 2013
2Q6E
DownloadVisualize
BU of 2q6e by Molmil
Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn
分子名称: BH0493 protein, CHLORIDE ION, SODIUM ION, ...
著者Fedorov, A.A, Fedorov, E.V, Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Rauschel, F.M, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-06-05
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn.
To be Published
2PX4
DownloadVisualize
BU of 2px4 by Molmil
Crystal structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase domain in complex with SAH (Monoclinic form 2)
分子名称: CHLORIDE ION, GLYCEROL, Genome polyprotein [Contains: Capsid protein C (Core protein); Envelope protein M (Matrix protein); Major envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Flavivirin protease NS3 catalytic subunit; Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5)], ...
著者Assenberg, R, Ren, J, Verma, A, Walter, T.S, Alderton, D, Hurrelbrink, R.J, Fuller, S.D, Owens, R.J, Stuart, D.I, Grimes, J.M, Oxford Protein Production Facility (OPPF)
登録日2007-05-14
公開日2007-05-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the Murray Valley encephalitis virus NS5 methyltransferase domain in complex with cap analogues.
J.Gen.Virol., 88, 2007
2PFN
DownloadVisualize
BU of 2pfn by Molmil
Na in the active site of DNA Polymerase lambda
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ...
著者Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A.
登録日2007-04-05
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Role of the catalytic metal during polymerization by DNA polymerase lambda.
DNA Repair, 6, 2007
2CFW
DownloadVisualize
BU of 2cfw by Molmil
AGAO in complex with wc7a (Ru-wire inhibitor, 7-carbon linker, data set a)
分子名称: COPPER (II) ION, GLYCEROL, PHENYLETHYLAMINE OXIDASE, ...
著者Langley, D.B, Duff, A.P, Freeman, H.C, Guss, J.M, Juda, G.A, Dooley, D.M, Contakes, S.M, Halpern-Manners, N.W, Dunn, A.R, Gray, H.B.
登録日2006-02-24
公開日2007-05-01
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Enantiomer-Specific Binding of Ruthenium(II) Molecular Wires by the Amine Oxidase of Arthrobacter Globiformis.
J.Am.Chem.Soc., 130, 2008
2CG1
DownloadVisualize
BU of 2cg1 by Molmil
AGAO in complex with wc11b (Ru-wire inhibitor, 11-carbon linker, data set b)
分子名称: COPPER (II) ION, GLYCEROL, PHENYLETHYLAMINE OXIDASE, ...
著者Langley, D.B, Duff, A.P, Freeman, H.C, Guss, J.M, Juda, G.A, Dooley, D.M, Contakes, S.M, Halpern-Manners, N.W, Dunn, A.R, Gray, H.B.
登録日2006-02-27
公開日2007-05-01
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Enantiomer-Specific Binding of Ruthenium(II) Molecular Wires by the Amine Oxidase of Arthrobacter Globiformis.
J.Am.Chem.Soc., 130, 2008
2PJU
DownloadVisualize
BU of 2pju by Molmil
Crystal structure of propionate catabolism operon regulatory protein prpR
分子名称: Propionate catabolism operon regulatory protein
著者Ramagopal, U.A, Toro, R, Gilmore, M, Wu, B, Koss, J, Groshong, C, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-04-16
公開日2007-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of propionate catabolism operon regulatory protein prpR
To be Published
2CKU
DownloadVisualize
BU of 2cku by Molmil
Solution structure of 2F13F1 from human fibronectin
分子名称: FIBRONECTIN
著者Werner, J.M, Potts, J.R.
登録日2006-04-21
公開日2007-04-03
最終更新日2021-06-23
実験手法SOLUTION NMR
主引用文献The Solution and Crystal Structures of a Module Pair from the Staphylococcus Aureus-Binding Site of Human Fibronectin-A Tale with a Twist.
J.Mol.Biol., 368, 2007
1JU4
DownloadVisualize
BU of 1ju4 by Molmil
BACTERIAL COCAINE ESTERASE COMPLEX WITH PRODUCT
分子名称: BENZOIC ACID, cocaine esterase
著者Larsen, N.A, Turner, J.M, Stevens, J, Rosser, S.J, Basran, A, Lerner, R.A, Bruce, N.C, Wilson, I.A.
登録日2001-08-23
公開日2001-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal structure of a bacterial cocaine esterase.
Nat.Struct.Biol., 9, 2002
4KRI
DownloadVisualize
BU of 4kri by Molmil
Haemonchus contortus Phospholethanolamine N-methyltransferase 2 in complex with phosphomonomethylethanolamine and S-adenosylhomocysteine
分子名称: 2-(methylamino)ethyl dihydrogen phosphate, Phospholethanolamine N-methyltransferase 2, S-ADENOSYL-L-HOMOCYSTEINE
著者Lee, S.G, Jez, J.M.
登録日2013-05-16
公開日2013-09-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Evolution of structure and mechanistic divergence in di-domain methyltransferases from nematode phosphocholine biosynthesis.
Structure, 21, 2013
2PW9
DownloadVisualize
BU of 2pw9 by Molmil
Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila
分子名称: Putative formate dehydrogenase accessory protein, SULFATE ION
著者Bonanno, J.B, Dickey, M, Bain, K.T, Logan, C, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-05-10
公開日2007-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila.
To be Published
2PWW
DownloadVisualize
BU of 2pww by Molmil
Crystal structure of ABC2387 from Bacillus clausii
分子名称: 1,2-ETHANEDIOL, Uncharacterized protein
著者Ramagopal, U.A, Freeman, J, Lau, C, Toro, R, Bain, K, Rodgers, L, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-05-14
公開日2007-05-22
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structure of ABC2387 from Bacillus clausii.
To be Published
4K2F
DownloadVisualize
BU of 4k2f by Molmil
Structure of Pseudomonas aeruginosa PvdQ bound to BRD-A08522488
分子名称: (2S)-(4-chlorophenyl)(6-chloropyridin-2-yl)ethanenitrile, 1,2-ETHANEDIOL, Acyl-homoserine lactone acylase PvdQ
著者Drake, E.J, Wurst, J.M, Theriault, J.R, Munoz, B, Gulick, A.M.
登録日2013-04-09
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Identification of Inhibitors of PvdQ, an Enzyme Involved in the Synthesis of the Siderophore Pyoverdine.
Acs Chem.Biol., 9, 2014
2B68
DownloadVisualize
BU of 2b68 by Molmil
Solution structure of the recombinant Crassostrea gigas defensin
分子名称: defensin
著者Gueguen, Y, Amaury, H, Aumelas, A, Garnier, J, Fievet, J, Escoubas, J.M, Bulet, P, Gonzales, M, Lelong, C, Favrel, P, Bachere, E.
登録日2005-09-30
公開日2005-11-29
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Characterization of a Defensin from the Oyster Crassostrea gigas: recombinant production, folding, solution structure, antimicrobial activities and gene expression
J.Biol.Chem., 281, 2006
2BBT
DownloadVisualize
BU of 2bbt by Molmil
Human deltaF508 NBD1 with two solublizing mutations.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
著者Lewis, H.A, Kearins, M.C, Conners, K, Zhao, X, Lu, F, Sauder, J.M, Emtage, S.
登録日2005-10-17
公開日2005-11-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and dynamics of NBD1 from CFTR characterized using crystallography and hydrogen/deuterium exchange mass spectrometry.
J.Mol.Biol., 396, 2010
2BCS
DownloadVisualize
BU of 2bcs by Molmil
DNA polymerase lambda in complex with a DNA duplex containing an unpaired Dcmp
分子名称: 5'-D(*CP*AP*GP*TP*AP*CP*G)-3', 5'-D(*CP*GP*GP*CP*CP*GP*CP*TP*AP*CP*TP*G)-3', 5'-D(*GP*CP*CP*G)-3', ...
著者Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A.
登録日2005-10-19
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of strand misalignment during DNA synthesis by a human DNA polymerase
Cell(Cambridge,Mass.), 124, 2006
1ETZ
DownloadVisualize
BU of 1etz by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF AN ANTI-SWEETENER FAB, NC10.14, SHOWS THE EXTENT OF STRUCTURAL DIVERSITY IN ANTIGEN RECOGNITION BY IMMUNOGLOBULINS
分子名称: FAB NC10.14 - HEAVY CHAIN, FAB NC10.14 - LIGHT CHAIN, N-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID
著者Guddat, L.W, Shan, L, Broomell, C, Ramsland, P.A, Fan, Z, Anchin, J.M, Linthicum, D.S, Edmundson, A.B.
登録日2000-04-13
公開日2000-10-18
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The three-dimensional structure of a complex of a murine Fab (NC10. 14) with a potent sweetener (NC174): an illustration of structural diversity in antigen recognition by immunoglobulins.
J.Mol.Biol., 302, 2000
2B8E
DownloadVisualize
BU of 2b8e by Molmil
CopA ATP Binding Domain
分子名称: cation-transporting ATPase
著者Sazinsky, M.H, Mandal, A.K, Arguello, J.M, Rosenzweig, A.C.
登録日2005-10-06
公開日2006-01-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the ATP binding domain from the Archaeoglobus fulgidus Cu+-ATPase.
J.Biol.Chem., 281, 2006
2VNF
DownloadVisualize
BU of 2vnf by Molmil
MOLECULAR BASIS OF HISTONE H3K4ME3 RECOGNITION BY ING4
分子名称: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, HISTONE H3, ...
著者Palacios, A, Munoz, I.G, Pantoja-Uceda, D, Marcaida, M.J, Torres, D, Martin-Garcia, J.M, Luque, I, Montoya, G, Blanco, F.J.
登録日2008-02-04
公開日2008-04-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Molecular Basis of Histone H3K4Me3 Recognition by Ing4
J.Biol.Chem., 283, 2008
2B8P
DownloadVisualize
BU of 2b8p by Molmil
Crystal structure of Acanthamoeba polyphaga mimivirus NDK, the first viral nucleoside diphosphate kinase
分子名称: Probable nucleoside diphosphate kinase, SULFATE ION
著者Jeudy, S, Claverie, J.M, Abergel, C.
登録日2005-10-10
公開日2005-11-15
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
1GHQ
DownloadVisualize
BU of 1ghq by Molmil
CR2-C3D COMPLEX STRUCTURE
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, COMPLEMENT C3, CR2/CD121/C3D/EPSTEIN-BARR VIRUS RECEPTOR, ...
著者Szakonyi, G, Guthridge, J.M, Li, D, Holers, V.M, Chen, X.S.
登録日2001-01-11
公開日2001-06-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure of complement receptor 2 in complex with its C3d ligand.
Science, 292, 2001
2BB8
DownloadVisualize
BU of 2bb8 by Molmil
N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: INTEGRASE
著者Clubb, R.T, Connolly, K.M, Wojciak, J.M.
登録日1998-05-12
公開日1998-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Site-specific DNA binding using a variation of the double stranded RNA binding motif.
Nat.Struct.Biol., 5, 1998
1BQZ
DownloadVisualize
BU of 1bqz by Molmil
J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-78) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
分子名称: DNAJ
著者Huang, K, Flanagan, J.M, Prestegard, J.H.
登録日1998-08-20
公開日1999-06-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The influence of C-terminal extension on the structure of the "J-domain" in E. coli DnaJ.
Protein Sci., 8, 1999

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon