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PDB: 5628 件

7SGE
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I53-50 nanoparticle core reconstructed from GPC-I53-50NP by focused refinement
分子名称: I53-50B component, Josiah GPCysR4-I53-50A - nanoparticle component
著者Antanasijevic, A, Brouwer, P.J.M, Ward, A.B.
登録日2021-10-05
公開日2022-10-12
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Lassa virus glycoprotein nanoparticles elicit neutralizing antibody responses and protection.
Cell Host Microbe, 30, 2022
4OPH
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BU of 4oph by Molmil
X-ray structure of full-length H6N6 NS1
分子名称: Nonstructural protein 1
著者Carrillo, B, Choi, J.M, Bornholdt, Z.A, Sankaran, S, Rice, A.P, Prasad, B.V.V.
登録日2014-02-05
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.158 Å)
主引用文献The Influenza A Virus Protein NS1 Displays Structural Polymorphism.
J.Virol., 88, 2014
7SGD
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BU of 7sgd by Molmil
Lassa virus glycoprotein construct(Josiah GPCysR4) recovered from GPC-I53-50 nanoparticle by localized reconstruction
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Antanasijevic, A, Brouwer, P.J.M, Ward, A.B.
登録日2021-10-05
公開日2022-10-12
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献Lassa virus glycoprotein nanoparticles elicit neutralizing antibody responses and protection.
Cell Host Microbe, 30, 2022
4OIA
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BU of 4oia by Molmil
Crystal Structure of ICAM-5 D1-D4 ectodomain fragment, Space Group P4322
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Recacha, R, Jimenez, D, Tian, L, Barredo, R, Ghamberg, C, Casasnovas, J.M.
登録日2014-01-19
公開日2014-07-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal structures of an ICAM-5 ectodomain fragment show electrostatic-based homophilic adhesions.
Acta Crystallogr.,Sect.D, 70, 2014
8FDW
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BU of 8fdw by Molmil
Cryo-EM structure of SARS-CoV-2 postfusion spike in membrane
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2, ...
著者Zhang, J, Shi, W, Cai, Y.F, Zhu, H.S, Peng, H.Q, Voyer, J, Volloch, S.R, Cao, H, Mayer, M.L, Song, K.K, Xu, C, Lu, J.M, Chen, B.
登録日2022-12-05
公開日2023-05-10
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 postfusion spike in membrane.
Nature, 619, 2023
4CCP
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BU of 4ccp by Molmil
X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS
分子名称: PROTOPORPHYRIN IX CONTAINING FE, YEAST CYTOCHROME C PEROXIDASE
著者Wang, J, Mauro, J.M, Edwards, S.L, Oatley, S.J, Fishel, L.A, Ashford, V.A, Xuong, N.-H, Kraut, J.
登録日1990-02-28
公開日1991-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structures of recombinant yeast cytochrome c peroxidase and three heme-cleft mutants prepared by site-directed mutagenesis.
Biochemistry, 29, 1990
8UB3
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BU of 8ub3 by Molmil
DpHF7 filament
分子名称: DpHF7 filament
著者Lynch, E.M, Farrell, D, Shen, H, Kollman, J.M, DiMaio, F, Baker, D.
登録日2023-09-22
公開日2024-04-10
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献De novo design of pH-responsive self-assembling helical protein filaments.
Nat Nanotechnol, 19, 2024
8UAO
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BU of 8uao by Molmil
DpHF18 filament
分子名称: DpHF18
著者Lynch, E.M, Shen, H, Kollman, J.M, Baker, D.
登録日2023-09-21
公開日2024-04-10
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献De novo design of pH-responsive self-assembling helical protein filaments.
Nat Nanotechnol, 19, 2024
4OMY
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BU of 4omy by Molmil
Crystal Structure of SeMet NolR from Sinorhizobium fredii in complex with oligo AT DNA
分子名称: DNA (5 -D(*TP*AP*AP*TP*CP*TP*CP*TP*TP*GP*GP*GP*AP*CP*TP*TP*CP*AP*AP*TP*TP*A)-3 ), DNA (5 -D(*TP*AP*TP*TP*AP*GP*AP*GP*AP*AP*CP*CP*CP*TP*GP*AP*AP*GP*TP*TP*AP*A)-3 ), NolR
著者Lee, S.G, Krishnan, H.B, Jez, J.M.
登録日2014-01-28
公開日2014-04-16
最終更新日2014-06-04
実験手法X-RAY DIFFRACTION (3.062 Å)
主引用文献Structural basis for regulation of rhizobial nodulation and symbiosis gene expression by the regulatory protein NolR.
Proc.Natl.Acad.Sci.USA, 111, 2014
4OPX
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BU of 4opx by Molmil
Structure of Human PARP-1 bound to a DNA double strand break in complex with (2R)-5-fluoro-2-methyl-2,3-dihydro-1-benzofuran-7-carboxamide
分子名称: (2R)-5-fluoro-2-methyl-2,3-dihydro-1-benzofuran-7-carboxamide, DNA (26-MER), Poly [ADP-ribose] polymerase 1, ...
著者Pascal, J.M, Steffen, J.D.
登録日2014-02-06
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.314 Å)
主引用文献Discovery and Structure-Activity Relationship of Novel 2,3-Dihydrobenzofuran-7-carboxamide and 2,3-Dihydrobenzofuran-3(2H)-one-7-carboxamide Derivatives as Poly(ADP-ribose)polymerase-1 Inhibitors.
J.Med.Chem., 57, 2014
4OUR
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BU of 4our by Molmil
Crystal structure of Arabidopsis thaliana phytochrome B photosensory module
分子名称: 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, GLYCEROL, Phytochrome B, ...
著者Sethe Burgie, E, Bussell, A.N, Walker, J.M, Dubiel, K, Vierstra, R.D.
登録日2014-02-18
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome.
Proc.Natl.Acad.Sci.USA, 111, 2014
3CCP
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BU of 3ccp by Molmil
X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS
分子名称: PROTOPORPHYRIN IX CONTAINING FE, YEAST CYTOCHROME C PEROXIDASE
著者Wang, J, Mauro, J.M, Edwards, S.L, Oatley, S.J, Fishel, L.A, Ashford, V.A, Xuong, N.-H, Kraut, J.
登録日1990-02-28
公開日1991-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structures of recombinant yeast cytochrome c peroxidase and three heme-cleft mutants prepared by site-directed mutagenesis.
Biochemistry, 29, 1990
1BTL
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BU of 1btl by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI TEM1 BETA-LACTAMASE AT 1.8 ANGSTROMS RESOLUTION
分子名称: BETA-LACTAMASE TEM1, SULFATE ION
著者Jelsch, C, Mourey, L, Masson, J.M, Samama, J.P.
登録日1993-11-01
公開日1995-01-26
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Escherichia coli TEM1 beta-lactamase at 1.8 A resolution.
Proteins, 16, 1993
4OQB
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BU of 4oqb by Molmil
Structure of Human PARP-1 bound to a DNA double strand break in complex with (2Z)-2-{4-[2-(morpholin-4-yl)ethoxy]benzylidene}-3-oxo-2,3-dihydro-1-benzofuran-7-carboxamide
分子名称: (2Z)-2-{4-[2-(morpholin-4-yl)ethoxy]benzylidene}-3-oxo-2,3-dihydro-1-benzofuran-7-carboxamide, DNA (26-MER), Poly [ADP-ribose] polymerase 1, ...
著者Pascal, J.M, Steffen, J.D.
登録日2014-02-07
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.362 Å)
主引用文献Discovery and Structure-Activity Relationship of Novel 2,3-Dihydrobenzofuran-7-carboxamide and 2,3-Dihydrobenzofuran-3(2H)-one-7-carboxamide Derivatives as Poly(ADP-ribose)polymerase-1 Inhibitors.
J.Med.Chem., 57, 2014
4ON0
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BU of 4on0 by Molmil
Crystal Structure of NolR from Sinorhizobium fredii in complex with oligo AA DNA
分子名称: DNA (5 -D(*TP*AP*AP*TP*CP*TP*CP*TP*TP*GP*GP*GP*AP*CP*TP*AP*CP*AP*AP*TP*TP*A)-3 ), DNA (5 -D(*TP*AP*TP*TP*AP*GP*AP*GP*AP*AP*CP*CP*CP*TP*GP*AP*TP*GP*TP*TP*AP*A)-3 ), NolR
著者Lee, S.G, Krishnan, H.B, Jez, J.M.
登録日2014-01-28
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for regulation of rhizobial nodulation and symbiosis gene expression by the regulatory protein NolR.
Proc.Natl.Acad.Sci.USA, 111, 2014
4P2B
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BU of 4p2b by Molmil
Crystal structure of the apo form of the glutaminyl-tRNA synthetase catalytic domain from Toxoplasma gondii.
分子名称: Glutamine aminoacyl-tRNA synthetase, SULFATE ION
著者van Rooyen, J.M, Belrhali, H, Hakimi, M.A.
登録日2014-03-03
公開日2015-03-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the apo form of the glutaminyl-tRNA synthetase catalytic domain from Toxoplasma gondii.
To Be Published
4PGF
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BU of 4pgf by Molmil
The structure of mono-acetylated SAHH
分子名称: ADENOSINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Kavran, J.M, Wang, Y, Cole, P.A, Leahy, D.J.
登録日2014-05-01
公開日2014-10-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Regulation of s-adenosylhomocysteine hydrolase by lysine acetylation.
J.Biol.Chem., 289, 2014
4PJ2
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BU of 4pj2 by Molmil
Crystal structure of Aeromonas hydrophila PliI in complex with Meretrix lusoria lysozyme
分子名称: GLYCEROL, Lysozyme, MAGNESIUM ION, ...
著者Leysen, S, Van Herreweghe, J.M, Yoneda, K, Ogata, M, Usui, T, Michiels, C.W, Araki, T, Strelkov, S.V.
登録日2014-05-10
公開日2015-02-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献The structure of the proteinaceous inhibitor PliI from Aeromonas hydrophila in complex with its target lysozyme.
Acta Crystallogr.,Sect.D, 71, 2015
1HFD
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BU of 1hfd by Molmil
HUMAN COMPLEMENT FACTOR D IN A P21 CRYSTAL FORM
分子名称: COMPLEMENT FACTOR D
著者Jing, H, Babu, Y.S, Moore, D, Kilpatrick, J.M, Liu, X.-Y, Volanakis, J.E, Narayana, S.V.L.
登録日1998-06-18
公開日1999-06-22
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of native and complexed complement factor D: implications of the atypical His57 conformation and self-inhibitory loop in the regulation of specific serine protease activity.
J.Mol.Biol., 282, 1998
4PPU
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BU of 4ppu by Molmil
Crystal Structure of AtCM1 with Tyrosine Bound in Allosteric Site
分子名称: Chorismate mutase 1, chloroplastic, TYROSINE
著者Westfall, C.S, Xu, A, Jez, J.M.
登録日2014-02-27
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural evolution of differential amino Acid effector regulation in plant chorismate mutases.
J.Biol.Chem., 289, 2014
1APM
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BU of 1apm by Molmil
2.0 ANGSTROM REFINED CRYSTAL STRUCTURE OF THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE COMPLEXED WITH A PEPTIDE INHIBITOR AND DETERGENT
分子名称: N-OCTANE, PEPTIDE INHIBITOR PKI(5-24), cAMP-DEPENDENT PROTEIN KINASE
著者Knighton, D.R, Bell, S.M, Zheng, J, Teneyck, L.F, Xuong, N.-H, Taylor, S.S, Sowadski, J.M.
登録日1993-01-18
公開日1993-04-15
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献2.0 A refined crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with a peptide inhibitor and detergent.
Acta Crystallogr.,Sect.D, 49, 1993
8VH7
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BU of 8vh7 by Molmil
Crystal structure of heparosan synthase 2 from Pasteurella multocida at 1.98 A
分子名称: 1,2-ETHANEDIOL, Heparosan synthase B, MANGANESE (II) ION, ...
著者Pedersen, L.C, Liu, J, Stancanelli, E, Krahn, J.M.
登録日2023-12-31
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.982 Å)
主引用文献Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024
4P5Y
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BU of 4p5y by Molmil
Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, Glycosyl hydrolase, ...
著者Grondin, J.M, Allingham, J.S, Boraston, A.B, Smith, S.P.
登録日2014-03-04
公開日2015-10-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
PLoS ONE, 12, 2017
1WYY
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BU of 1wyy by Molmil
Post-fusion hairpin conformation of the sars coronavirus spike glycoprotein
分子名称: CHLORIDE ION, E2 Glycoprotein
著者Duquerroy, S, Vigouroux, A, Rottier, P.J.M, Rey, F.A, Bosch, B.J.
登録日2005-02-18
公開日2005-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Central ions and lateral asparagine/glutamine zippers stabilize the post-fusion hairpin conformation of the SARS coronavirus spike glycoprotein
Virology, 335, 2005
8VIW
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BU of 8viw by Molmil
Cryo-EM structure of heparosan synthase 2 from Pasteurella multocida with polysaccharide in the GlcNAc-T active site
分子名称: Heparosan synthase B, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
著者Krahn, J.M, Pedersen, L.C, Liu, J, Stancanelli, E, Borgnia, M, Vivarette, E.
登録日2024-01-05
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024

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