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PDB: 5628 件

7AKJ
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Structure of the SARS-CoV spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Fedry, J, Hurdiss, D.L, Wang, C, Li, W, Obal, G, Drulyte, I, Howes, S.C, van Kuppeveld, F.J.M, Foerster, F, Bosch, B.J.
登録日2020-10-01
公開日2021-05-19
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into the cross-neutralization of SARS-CoV and SARS-CoV-2 by the human monoclonal antibody 47D11.
Sci Adv, 7, 2021
1GIB
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MU-CONOTOXIN GIIIB, NMR
分子名称: MU-CONOTOXIN GIIIB
著者Hill, J.M, Alewood, P.F, Craik, D.J.
登録日1996-04-17
公開日1996-11-08
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of mu-conotoxin GIIIB, a specific blocker of skeletal muscle sodium channels.
Biochemistry, 35, 1996
1A30
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HIV-1 PROTEASE COMPLEXED WITH A TRIPEPTIDE INHIBITOR
分子名称: HIV-1 PROTEASE, TRIPEPTIDE GLU-ASP-LEU
著者Louis, J.M, Dyda, F, Nashed, N.T, Kimmel, A.R, Davies, D.R.
登録日1998-01-27
公開日1998-04-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hydrophilic peptides derived from the transframe region of Gag-Pol inhibit the HIV-1 protease.
Biochemistry, 37, 1998
1A8K
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CRYSTALLOGRAPHIC ANALYSIS OF HUMAN IMMUNODEFICIENCY VIRUS 1 PROTEASE WITH AN ANALOG OF THE CONSERVED CA-P2 SUBSTRATE: INTERACTIONS WITH FREQUENTLY OCCURRING GLUTAMIC ACID RESIDUE AT P2' POSITION OF SUBSTRATES
分子名称: HIV PROTEASE, N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide
著者Weber, I.T, Wu, J, Adomat, J, Harrison, R.W, Kimmel, A.R, Wondrak, E.M, Louis, J.M.
登録日1998-03-27
公開日1999-01-13
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic analysis of human immunodeficiency virus 1 protease with an analog of the conserved CA-p2 substrate -- interactions with frequently occurring glutamic acid residue at P2' position of substrates.
Eur.J.Biochem., 249, 1997
1DAZ
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Structural and kinetic analysis of drug resistant mutants of HIV-1 protease
分子名称: HIV-1 PROTEASE (RETROPEPSIN), N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide
著者Mahalingam, B, Louis, J.M, Reed, C.C, Adomat, J.M, Krouse, J, Wang, Y.F, Harrison, R.W, Weber, I.T.
登録日1999-11-01
公開日2000-05-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural and kinetic analysis of drug resistant mutants of HIV-1 protease.
Eur.J.Biochem., 263, 1999
7CUE
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Crystal structure of HID2 bound to human Hemoglobin
分子名称: Amino acid ABC transporter substrate-binding protein, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Caaveiro, J.M.M, Hoshino, M, Tsumoto, K.
登録日2020-08-22
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for the recognition of human hemoglobin by the Shr protein from Streptococcus pyogenes
To Be Published
7CUD
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Crystal structure of HID in the unbound form
分子名称: Amino acid ABC transporter substrate-binding protein, BROMIDE ION
著者Caaveiro, J.M.M, Hoshino, M, Tsumoto, K.
登録日2020-08-22
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the recognition of human hemoglobin by the Shr protein from Streptococcus pyogenes
To Be Published
3VD6
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Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P21 Crystal Form
分子名称: ACETATE ION, DNA (5'-D(*AP*AP*GP*AP*GP*TP*CP*CP*AP*TP*CP*TP*GP*AP*TP*AP*AP*GP*AP*C)-3'), DNA (5'-D(*TP*TP*GP*TP*CP*TP*TP*AP*TP*CP*AP*GP*AP*TP*GP*GP*AP*CP*TP*C)-3'), ...
著者Jacques, D.A, Ripin, N, Wilkinson-White, L.E, Guss, J.M, Matthews, J.M.
登録日2012-01-04
公開日2013-01-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献GATA1 directly mediates interactions with closely spaced pseudopalindromic but not distantly spaced double GATA sites on DNA.
Protein Sci., 24, 2015
2XU4
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CATHEPSIN L WITH A NITRILE INHIBITOR
分子名称: (2S,4R)-4-(2-chlorophenyl)sulfonyl-1-[1-(4-fluorophenyl)cyclopropyl]carbonyl-N-[1-(iminomethyl)cyclopropyl]pyrrolidine-2-carboxamide, CATHEPSIN L1, GLYCEROL
著者Banner, D.W, Benz, J.M, Haap, W.
登録日2010-10-14
公開日2011-01-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Systematic Investigation of Halogen Bonding in Protein-Ligand Interactions.
Angew.Chem.Int.Ed.Engl., 50, 2011
2XU5
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CATHEPSIN L WITH A NITRILE INHIBITOR
分子名称: (2S,4R)-4-(2-chlorophenyl)sulfonyl-N-[1-(iminomethyl)cyclopropyl]-1-[1-(4-methylphenyl)cyclopropyl]carbonyl-pyrrolidine-2-carboxamide, CATHEPSIN L1, CITRATE ANION, ...
著者Banner, D.W, Benz, J.M, Haap, W.
登録日2010-10-14
公開日2011-01-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Systematic Investigation of Halogen Bonding in Protein-Ligand Interactions.
Angew.Chem.Int.Ed.Engl., 50, 2011
7MRJ
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Crystal structure of a novel ubiquitin-like TINCR
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Forouhar, F, Morgado-Palacin, L, Brown, J.A, Martinez, T, Pedrero, J.M.G, Reglero, C, Chaudhry, I, Vaughan, J, Rodriguez-Perales, S, Allonca, E, Granda-Diaz, R, Quinn, S.A, Fernandez, A.F, Fraga, M.F, Kim, A.L, Santos-Juanes, J, Owens, D.M, Rodrigo, J.P, Saghatelian, A, Ferrando, A.A.
登録日2021-05-07
公開日2022-03-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献The TINCR ubiquitin-like microprotein is a tumor suppressor in squamous cell carcinoma.
Nat Commun, 14, 2023
4D28
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Crystal structure of the kinase domain of CIPK24/SOS2
分子名称: CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 24
著者Gonzalez-Rubio, J.M, Chaves-Sanjuan, A, Sanchez-Barrena, M.J, Albert, A.
登録日2014-05-08
公開日2014-10-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural Basis of the Regulatory Mechanism of the Plant Cipk Family of Protein Kinases Controlling Ion Homeostasis and Abiotic Stress
Proc.Natl.Acad.Sci.USA, 111, 2014
7M5W
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Crystal structure of the HMG-C1 domain of human capicua bound to DNA
分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*TP*TP*TP*TP*TP*CP*AP*TP*TP*CP*AP*TP*AP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*TP*AP*TP*GP*AP*AP*TP*GP*AP*AP*AP*AP*AP*GP*C)-3'), ...
著者Webb, J.P, Liew, J.J.M, Gnann, A.D, Dowling, D.P.
登録日2021-03-25
公開日2022-04-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Molecular basis of DNA recognition by the HMG-box-C1 module of Capicua
Biorxiv, 2022
176D
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NMR SOLUTION STRUCTURE OF A PEPTIDE NUCLEIC ACID COMPLEXED WITH RNA
分子名称: DNA (5'-D(*GPN*APN*APN*CPN*TPN*CPN)-3'), RNA (5'-R(P*GP*AP*GP*UP*UP*C)-3')
著者Brown, S.C, Veal, J.M.
登録日1994-05-17
公開日1994-11-01
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献NMR solution structure of a peptide nucleic acid complexed with RNA.
Science, 265, 1994
1A8V
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STRUCTURE OF THE RNA-BINDING DOMAIN OF THE RHO TRANSCRIPTION TERMINATOR
分子名称: COPPER (II) ION, TRANSCRIPTION TERMINATION FACTOR RHO
著者Fass, D, Bogden, C, Berger, J.M.
登録日1998-03-28
公開日1999-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structural basis for terminator recognition by the Rho transcription termination factor.
Mol.Cell, 3, 1999
1A92
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OLIGOMERIZATION DOMAIN OF HEPATITIS DELTA ANTIGEN
分子名称: DELTA ANTIGEN
著者Zuccola, H.J, Hogle, J.M.
登録日1998-04-15
公開日1999-06-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of the oligomerization of hepatitis delta antigen.
Structure, 6, 1998
1B69
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THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX
分子名称: DNA (5'-D(*GP*AP*AP*TP*TP*TP*AP*CP*TP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*AP*GP*TP*AP*AP*AP*TP*TP*C)-3'), PROTEIN (INTEGRASE)
著者Clubb, R.T, Wojciak, J.M, Connolly, K.M.
登録日1999-01-21
公開日1999-09-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the Tn916 integrase-DNA complex.
Nat.Struct.Biol., 6, 1999
1BAI
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Crystal structure of Rous sarcoma virus protease in complex with inhibitor
分子名称: N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide, PROTEASE
著者Wu, J, Adomat, J.M, Ridky, T.W, Louis, J.M, Leis, J, Harrison, R.W, Weber, I.T.
登録日1998-04-17
公開日1999-01-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for specificity of retroviral proteases.
Biochemistry, 37, 1998
1B79
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N-TERMINAL DOMAIN OF DNA REPLICATION PROTEIN DNAB
分子名称: DnaB Helicase
著者Fass, D, Bogden, C.E, Berger, J.M.
登録日1999-01-28
公開日1999-06-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the N-terminal domain of the DnaB hexameric helicase.
Structure Fold.Des., 7, 1999
3E4C
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Procaspase-1 zymogen domain crystal structure
分子名称: Caspase-1, MAGNESIUM ION
著者Elliott, J.M, Rouge, L, Wiesmann, C, Scheer, J.M.
登録日2008-08-11
公開日2008-12-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of procaspase-1 zymogen domain reveals insight into inflammatory caspase autoactivation
J.Biol.Chem., 284, 2009
1B2J
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CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G43A MUTANT
分子名称: FE (III) ION, PROTEIN (RUBREDOXIN)
著者Maher, M.J, Guss, J.M, Wilce, M.C.J, Wedd, A.G.
登録日1998-11-27
公開日1999-05-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rubredoxin from Clostridium pasteurianum. Structures of G10A, G43A and G10VG43A mutant proteins. Mutation of conserved glycine 10 to valine causes the 9-10 peptide link to invert.
Acta Crystallogr.,Sect.D, 55, 1999
1B34
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CRYSTAL STRUCTURE OF THE D1D2 SUB-COMPLEX FROM THE HUMAN SNRNP CORE DOMAIN
分子名称: PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1), PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2)
著者Walke, S, Young, R.J, Kambach, C, Avis, J.M, De La Fortelle, E, Li, J, Nagai, K.
登録日1998-12-17
公開日2000-01-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs.
Cell(Cambridge,Mass.), 96, 1999
1B2O
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CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G10VG43A MUTANT
分子名称: FE (III) ION, PROTEIN (RUBREDOXIN)
著者Maher, M.J, Guss, J.M, Wilce, M.C.J, Wedd, A.G.
登録日1998-11-30
公開日1999-05-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rubredoxin from Clostridium pasteurianum. Structures of G10A, G43A and G10VG43A mutant proteins. Mutation of conserved glycine 10 to valine causes the 9-10 peptide link to invert.
Acta Crystallogr.,Sect.D, 55, 1999
1B8I
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STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
分子名称: DNA (5'-D(*AP*CP*GP*TP*GP*AP*TP*TP*TP*AP*TP*GP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*CP*AP*TP*AP*AP*AP*TP*CP*AP*C)-3'), PROTEIN (HOMEOBOX PROTEIN EXTRADENTICLE), ...
著者Passner, J.M, Ryoo, H.-D, Shen, L, Mann, R.S, Aggarwal, A.K.
登録日1999-02-01
公開日1999-04-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of a DNA-bound Ultrabithorax-Extradenticle homeodomain complex.
Nature, 397, 1999
2O8R
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Crystal Structure of Polyphosphate Kinase from Porphyromonas Gingivalis
分子名称: Polyphosphate kinase, SULFATE ION
著者Patskovsky, Y, Toro, R, Sauder, J.M, Dickey, M, Adams, J.M, Ozyurt, S, Wasserman, S.R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-12-12
公開日2006-12-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of Polyphosphate Kinase from Porphyromonas Gingivalis
To be Published

224201

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