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PDB: 5628 results

6QAI
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BU of 6qai by Molmil
2-desoxiribosyltransferase from Leishmania mexicana
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-Deoxyribosyltransferase
Authors:Crespo, N, Mancheno, J.M.
Deposit date:2018-12-19
Release date:2018-12-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:2'-Deoxyribosyltransferase from Leishmania mexicana, an efficient biocatalyst for one-pot, one-step synthesis of nucleosides from poorly soluble purine bases.
Appl.Microbiol.Biotechnol., 101, 2017
6QBR
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BU of 6qbr by Molmil
structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S200D, S203D
Descriptor: Cell wall assembly regulator SMI1
Authors:Guillien, M, Batista, M, Francois, J.M, Mourey, L, Maveyraud, L, Zerbib, D.
Deposit date:2018-12-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S200D, S203D
To Be Published
7QV7
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BU of 7qv7 by Molmil
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
Descriptor: Hydrogen dependent carbon dioxide reductase subunit FdhF, Hydrogen dependent carbon dioxide reductase subunit HycB3, Hydrogen dependent carbon dioxide reductase subunit HycB4, ...
Authors:Dietrich, H.M, Righetto, R.D, Kumar, A, Wietrzynski, W, Schuller, S.K, Trischler, R, Wagner, J, Schwarz, F.M, Engel, B.D, Mueller, V, Schuller, J.M.
Deposit date:2022-01-19
Release date:2022-07-06
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Membrane-anchored HDCR nanowires drive hydrogen-powered CO 2 fixation.
Nature, 607, 2022
4ZRN
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BU of 4zrn by Molmil
Crystal Structure of UDP-Glucose 4-Epimerase (TM0509) with UDP-glucose from Hyperthermophilic Eubacterium Thermotoga Maritima
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Choi, J.M, Lee, D.W, Lee, S.H.
Deposit date:2015-05-12
Release date:2015-09-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis of substrate promiscuity in UDP-hexose 4-epimerase from the hyperthermophilic Eubacterium Thermotoga maritima
Arch.Biochem.Biophys., 585, 2015
5V80
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BU of 5v80 by Molmil
PIM1 kinase in complex with Cpd1 (1-methyl-4-(3-(6-(piperazin-1-yl)pyridin-2-yl)-1H-pyrazolo[3,4-c]pyridin-5-yl)piperazin-2-one)
Descriptor: 1-methyl-4-{3-[6-(piperazin-1-yl)pyridin-2-yl]-1H-pyrazolo[3,4-c]pyridin-5-yl}piperazin-2-one, PHOSPHATE ION, Serine/threonine-protein kinase pim-1
Authors:Murray, J.M, Wallweber, H.
Deposit date:2017-03-21
Release date:2018-04-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Discovery of 5-Azaindazole (GNE-955) as a Potent Pan-Pim Inhibitor with Optimized Bioavailability.
J. Med. Chem., 60, 2017
5KTW
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BU of 5ktw by Molmil
CREBBP bromodomain in complex with Cpd 44 (3-((5-acetyl-1-(cyclopropylmethyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl)amino)-N-isopropylbenzamide)
Descriptor: 1,2-ETHANEDIOL, 3-[[1-(cyclopropylmethyl)-5-ethanoyl-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-3-yl]amino]-~{N}-propan-2-yl-benzamide, CREB-binding protein
Authors:Murray, J.M, Boenig, G.
Deposit date:2016-07-12
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.087 Å)
Cite:Discovery of a Potent and Selective in Vivo Probe (GNE-272) for the Bromodomains of CBP/EP300.
J. Med. Chem., 59, 2016
7URJ
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BU of 7urj by Molmil
Backbone-modified variant of the B domain of Staphylococcal protein A: beta3- and ACPC-residues in helix 2
Descriptor: Staphylococcal protein A
Authors:Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S.
Deposit date:2022-04-22
Release date:2023-05-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Effects of altered backbone composition on the folding kinetics and mechanism of an ultrafast-folding protein.
Chem Sci, 15, 2024
7LOY
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BU of 7loy by Molmil
Dihydrodipicolinate synthase with pyruvate from Candidatus Liberibacter solanacearum
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase
Authors:Gilkes, J.M, Frampton, R.A, Board, A, Sheen, C.R, Smith, G.R, Dobson, R.C.J.
Deposit date:2021-02-11
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dihydrodipicolinate synthase with pyruvate from the plant pathogen, Candidatus Liberibacter solanacearum
To Be Published
6QEL
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BU of 6qel by Molmil
E. coli DnaBC apo complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein dnaC, MAGNESIUM ION, ...
Authors:Arias-Palomo, E, Puri, N, O'Shea Murray, V.L, Yan, Q, Berger, J.M.
Deposit date:2019-01-08
Release date:2019-03-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Physical Basis for the Loading of a Bacterial Replicative Helicase onto DNA.
Mol.Cell, 74, 2019
7UXB
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BU of 7uxb by Molmil
Human triosephosphate isomerase mutant G122R
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Triosephosphate isomerase
Authors:Romero, J.M.
Deposit date:2022-05-05
Release date:2023-05-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human triosephosphate isomerase mutant G122R
To Be Published
7UXV
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BU of 7uxv by Molmil
human triosephosphate isomerase mutant G122R
Descriptor: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Romero, J.M.
Deposit date:2022-05-06
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:human triosephosphate isomerase mutant G122R
To Be Published
7LVL
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BU of 7lvl by Molmil
Dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine from Candidatus Liberibacter solanacearum
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE
Authors:Gilkes, J.M, Frampton, R.A, Board, A.J, Sheen, C.R, Smith, G.R, Dobson, R.C.J.D.
Deposit date:2021-02-25
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine from Candidatus Liberibacter solanacearum
To Be Published
4Z98
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BU of 4z98 by Molmil
Crystal Structure of Hen Egg White Lysozyme using Serial X-ray Diffraction Data Collection
Descriptor: ACETATE ION, Lysozyme C
Authors:Murray, T.D, Lyubimov, A.Y, Ogata, C.M, Uervirojnangkoorn, M, Brunger, A.T, Berger, J.M.
Deposit date:2015-04-10
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A high-transparency, micro-patternable chip for X-ray diffraction analysis of microcrystals under native growth conditions.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
7QVI
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BU of 7qvi by Molmil
Fiber-forming RubisCO derived from ancestral sequence reconstruction and rational engineering
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RubisCO large subunit
Authors:Schulz, L, Zarzycki, J, Prinz, S, Schuller, J.M, Erb, T.J, Hochberg, G.K.A.
Deposit date:2022-01-21
Release date:2022-10-12
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Evolution of increased complexity and specificity at the dawn of form I Rubiscos.
Science, 378, 2022
7W81
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BU of 7w81 by Molmil
Crystal structure of the heme-bound form of the linker-NEAT3 region of IsdH from Staphylococcus aureus
Descriptor: Iron-regulated surface determinant protein H, PROTOPORPHYRIN IX CONTAINING FE
Authors:Caaveiro, J.M.M, Vu, N, Tsumoto, K.
Deposit date:2021-12-07
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and role of the linker domain of the iron surface-determinant protein IsdH in heme transportation in Staphylococcus aureus.
J.Biol.Chem., 298, 2022
7LJI
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BU of 7lji by Molmil
Structure of poly(aspartic acid) hydrolase PahZ2 with Gd+3 bound
Descriptor: GADOLINIUM ION, Poly(Aspartic acid) hydrolase
Authors:Brambley, C.A, Yared, T.J, Gonzalez, M, Jansch, A.L, Wallen, J.R, Weiland, M.H, Miller, J.M.
Deposit date:2021-01-29
Release date:2021-12-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Sphingomonas sp. KT-1 PahZ2 Structure Reveals a Role for Conformational Dynamics in Peptide Bond Hydrolysis.
J.Phys.Chem.B, 125, 2021
4ZI9
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BU of 4zi9 by Molmil
Structure of mouse clustered PcdhgA1 EC1-3
Descriptor: CALCIUM ION, MCG133388, isoform CRA_t
Authors:Nicoludis, J.M, Lau, S.-Y, Scharfe, C.P.I, Marks, D.S, Weihofen, W.A, Gaudet, R.
Deposit date:2015-04-27
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Sequence Analyses of Clustered Protocadherins Reveal Antiparallel Interactions that Mediate Homophilic Specificity.
Structure, 23, 2015
6QBM
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BU of 6qbm by Molmil
structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S200A
Descriptor: Cell wall assembly regulator SMI1
Authors:Carivenc, C, Batista, M, Francois, J.M, Mourey, L, Maveyraud, L, Zerbib, D.
Deposit date:2018-12-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S200A
To Be Published
7LJH
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BU of 7ljh by Molmil
Structure of poly(aspartic acid) hydrolase PahZ2 with Zn+2 bound
Descriptor: Poly(Aspartic acid) hydrolase, ZINC ION
Authors:Brambley, C.A, Yared, T.J, Gonzalez, M, Jansch, A.L, Wallen, J.R, Weiland, M.H, Miller, J.M.
Deposit date:2021-01-29
Release date:2021-12-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Sphingomonas sp. KT-1 PahZ2 Structure Reveals a Role for Conformational Dynamics in Peptide Bond Hydrolysis.
J.Phys.Chem.B, 125, 2021
7LO9
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BU of 7lo9 by Molmil
RNA dodecamer containing a GNA A residue
Descriptor: Chains: A,B,C,D
Authors:Harp, J.M, Wawrzak, Z, Egli, M.
Deposit date:2021-02-09
Release date:2021-12-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Overcoming GNA/RNA base-pairing limitations using isonucleotides improves the pharmacodynamic activity of ESC+ GalNAc-siRNAs.
Nucleic Acids Res., 49, 2021
6QBO
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BU of 6qbo by Molmil
structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S203A
Descriptor: Cell wall assembly regulator SMI1
Authors:Ramos, N, Batista, M, Francois, J.M, Mourey, L, Maveyraud, L, Zerbib, D.
Deposit date:2018-12-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S203A
To Be Published
4Z87
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BU of 4z87 by Molmil
Structure of the IMP dehydrogenase from Ashbya gossypii bound to GDP
Descriptor: ACETATE ION, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Buey, R.M, de Pereda, J.M, Revuelta, J.L.
Deposit date:2015-04-08
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Guanine nucleotide binding to the Bateman domain mediates the allosteric inhibition of eukaryotic IMP dehydrogenases.
Nat Commun, 6, 2015
7WD4
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BU of 7wd4 by Molmil
Crystal structure of the Ilheus virus helicase: implications for enzyme function and drug design
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NS3 helicase
Authors:Wang, D.P, Wang, M.Y, Zhou, X, Wang, W.M, Cao, J.M.
Deposit date:2021-12-21
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the Ilheus virus helicase: implications for enzyme function and drug design
To Be Published
7QLJ
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BU of 7qlj by Molmil
Trans structure of rsKiiro Illuminated at 290 K
Descriptor: SULFATE ION, rsKiiro
Authors:van Thor, J.J, Baxter, J.M.
Deposit date:2021-12-20
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
6Q2U
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BU of 6q2u by Molmil
Structure of Cytochrome C4 from Pseudomonas aeruginosa
Descriptor: Cytochrome c4, HEME C
Authors:Carpenter, J.M, Zhong, F, Pletneva, E.V, Ragusa, M.J.
Deposit date:2019-08-08
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and redox properties of the diheme electron carrier cytochrome c4from Pseudomonas aeruginosa.
J.Inorg.Biochem., 203, 2019

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