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PDB: 6647 件

2D30
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Crystal Structure of Cytidine Deaminase Cdd-2 (BA4525) from Bacillus Anthracis at 2.40A Resolution
分子名称: ZINC ION, cytidine deaminase
著者Levdikov, V.M, Blagova, E.V, Fogg, M.J, Brannigan, J.A, Moroz, O.V, Wilkinson, A.J, Wilson, K.S, Structural Proteomics in Europe (SPINE)
登録日2005-09-21
公開日2006-09-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Cytidine Deaminase Cdd-2 (BA4525) from Bacillus Anthracis at 2.40A Resolution
To be Published
2D47
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MOLECULAR STRUCTURE OF A COMPLETE TURN OF A-DNA
分子名称: DNA (5'-D(*CP*CP*CP*CP*CP*GP*CP*GP*GP*GP*GP*G)-3'), SPERMINE
著者Verdaguer, N, Aymami, J, Fernandez-Forner, D, Fita, I, Coll, M, Huynh-Dinh, T, Igolen, J, Subirana, J.A.
登録日1991-10-02
公開日1991-10-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular structure of a complete turn of A-DNA.
J.Mol.Biol., 221, 1991
2YN4
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L-2-chlorobutryic acid bound complex L-haloacid dehalogenase from a Rhodobacteraceae family bacterium
分子名称: (2S)-2-chlorobutanoic acid, L-HALOACID DEHALOGENASE
著者Novak, H.R, Sayer, C, Isupov, M.N, Paszkiewicz, K, Gotz, D, Spragg, A.M, Littlechild, J.A.
登録日2012-10-12
公開日2013-05-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Marine Rhodobacteraceae L-Haloacid Dehalogenase Contains a Novel His/Glu Dyad that Could Activate the Catalytic Water.
FEBS J., 280, 2013
2YNE
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BU of 2yne by Molmil
Plasmodium vivax N-myristoyltransferase in complex with a benzothiophene inhibitor
分子名称: 2-(3-piperidin-4-yloxy-1-benzothiophen-2-yl)-5-[(1,3,5-trimethylpyrazol-4-yl)methyl]-1,3,4-oxadiazole, 2-oxopentadecyl-CoA, CHLORIDE ION, ...
著者Wright, M.H, Clough, B, Rackham, M.D, Brannigan, J.A, Grainger, M, Bottrill, A.R, Heal, W.P, Broncel, M, Serwa, R.A, Mann, D, Leatherbarrow, R.J, Wilkinson, A.J, Holder, A.A, Tate, E.W.
登録日2012-10-13
公開日2014-01-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Validation of N-Myristoyltransferase as an Antimalarial Drug Target Using an Integrated Chemical Biology Approach.
Nat.Chem., 6, 2014
6N3Z
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Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 4
分子名称: Epoxide hydrolase TrEH, N-methyl-4-{[trans-4-({[4-(trifluoromethoxy)phenyl]carbamoyl}amino)cyclohexyl]oxy}benzamide
著者de Oliveira, G.S, Adriani, P.P, Ribeiro, J.A, Morisseau, C, Hammock, B.D, Dias, M.V, Chambergo, F.S.
登録日2018-11-16
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.238 Å)
主引用文献The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors.
Int. J. Biol. Macromol., 129, 2019
6N5H
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Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 5
分子名称: 4-[(trans-4-{[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]dec-1-ylcarbamoyl]amino}cyclohexyl)oxy]benzoic acid, Epoxide hydrolase TrEH
著者Oliveira, G.S, Adriano, P.P, Ribeiro, J.A, Morisseau, C, Hammock, B.D, Dias, M.V, Chambergo, F.S.
登録日2018-11-21
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.717 Å)
主引用文献The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors
Int. J. Biol. Macromol., 129, 2019
5EHD
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Crystal structure of human nucleophosmin-core in complex with cytochrome c
分子名称: CHLORIDE ION, Nucleophosmin
著者Bernardo-Garcia, N, Hermoso, J.A, Gonzalez-Arzola, K, Diaz-Moreno, I, De la Rosa, M.A.
登録日2015-10-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of human nucleophosmin-core in complex with cytochrome c
To Be Published
6MR6
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E. coli cysteine desulfurase SufS H55A with a cysteine persulfide intermediate
分子名称: Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
著者Dunkle, J.A, Frantom, P.A.
登録日2018-10-11
公開日2019-01-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.019 Å)
主引用文献Structural Evidence for Dimer-Interface-Driven Regulation of the Type II Cysteine Desulfurase, SufS.
Biochemistry, 58, 2019
6MWN
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BU of 6mwn by Molmil
Crystal structure of hepatitis A virus IRES domain V in complex with Fab HAVx
分子名称: Fab HAVx Heavy Chain, Fab HAVx Light Chain, HAV dV RNA (92-MER)
著者Koirala, D, Shao, Y, Piccirilli, J.A.
登録日2018-10-29
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.838 Å)
主引用文献A conserved RNA structural motif for organizing topology within picornaviral internal ribosome entry sites.
Nat Commun, 10, 2019
6N04
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The X-ray crystal structure of AbsH3, an FAD dependent reductase from the Abyssomicin biosynthesis pathway in Streptomyces
分子名称: AbsH3, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE
著者Clinger, J.A, Wang, X, Cai, W, Miller, M.D, Van Lanen, S.G, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2018-11-06
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献The crystal structure of AbsH3: A putative flavin adenine dinucleotide-dependent reductase in the abyssomicin biosynthesis pathway.
Proteins, 2020
6N5F
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Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 3
分子名称: Epoxide hydrolase TrEH, N-(8-amino-8-oxooctyl)nonanamide
著者Oliveira, G.S, Adriani, P.P, Ribeiro, J.A, Morisseau, C, Hammock, B.D, Dias, M.V, Chambergo, F.S.
登録日2018-11-21
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors.
Int. J. Biol. Macromol., 129, 2019
6N5G
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Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 2
分子名称: 4-[(quinolin-3-yl)methyl]-N-[4-(trifluoromethoxy)phenyl]piperidine-1-carboxamide, Epoxide hydrolase TrEH
著者Oliveira, G.S, Adriani, P.P, Ribeiro, J.A, Morisseau, C, Hammock, B.D, Dias, M.V, Chambergo, F.S.
登録日2018-11-21
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors.
Int. J. Biol. Macromol., 129, 2019
2Z79
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BU of 2z79 by Molmil
High resolution crystal structure of a glycoside hydrolase family 11 xylanase of Bacillus subtilis
分子名称: Endo-1,4-beta-xylanase A, GLYCEROL
著者Vandermarliere, E, Bourgois, T.M, Strelkov, S.V, Delcour, J.A, Courtin, C.M, Rabijns, A.
登録日2007-08-16
公開日2007-12-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystallographic analysis shows substrate binding at the -3 to +1 active-site subsites and at the surface of glycoside hydrolase family 11 endo-1,4-beta-xylanases.
Biochem.J., 410, 2008
6MRD
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BU of 6mrd by Molmil
ADP-bound human mitochondrial Hsp60-Hsp10 half-football complex
分子名称: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
著者Gomez-Llorente, Y, Jebara, F, Patra, M, Malik, R, Nissemblat, S, Azem, A, Hirsch, J.A, Ubarretxena-Belandia, I.
登録日2018-10-12
公開日2020-04-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Structural basis for active single and double ring complexes in human mitochondrial Hsp60-Hsp10 chaperonin.
Nat Commun, 11, 2020
5EVF
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BU of 5evf by Molmil
Crystal structure of a Francisella virulence factor FvfA in the hexagonal form
分子名称: CHLORIDE ION, Francisella virulence factor, GLYCEROL
著者Kolappan, S, Lo, K.Y, Shen, C.L.J, Guttman, J.A, Craig, L.
登録日2015-11-19
公開日2016-10-26
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Structure of the conserved Francisella virulence protein FvfA.
Acta Crystallogr D Struct Biol, 73, 2017
6MS2
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Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis
分子名称: CALCIUM ION, Glycoside Hydrolase Family 43
著者Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
登録日2018-10-16
公開日2019-04-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.494 Å)
主引用文献Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
2ZNH
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Crystal Structure of a Domain-Swapped Serpin Dimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antithrombin-III, ...
著者Yamasaki, M, Huntington, J.A.
登録日2008-04-25
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a stable dimer reveals the molecular basis of serpin polymerization
Nature, 455, 2008
2DW6
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Crystal structure of the mutant K184A of D-Tartrate Dehydratase from Bradyrhizobium japonicum complexed with Mg++ and D-tartrate
分子名称: Bll6730 protein, D(-)-TARTARIC ACID, L(+)-TARTARIC ACID, ...
著者Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
登録日2006-08-07
公開日2006-12-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
368D
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STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L, Malinina, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
2DUT
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BU of 2dut by Molmil
Crystal structure of a M-loop deletion variant of MENT in the native conformation
分子名称: Heterochromatin-associated protein MENT
著者Whisstock, J.C, Buckle, A.M, McGowan, S, Irving, J.A.
登録日2006-07-26
公開日2006-08-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献X-ray crystal structure of MENT: evidence for functional loop-sheet polymers in chromatin condensation
Embo J., 25, 2006
6NKE
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BU of 6nke by Molmil
Wild-type GGGPS from Thermoplasma volcanium
分子名称: GLYCEROL, Geranylgeranylglyceryl phosphate synthase, IMIDAZOLE, ...
著者Blank, P.N, Alderfer, K.E, Gillott, B.N, Christianson, D.W, Himmelberger, J.A.
登録日2019-01-07
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural studies of geranylgeranylglyceryl phosphate synthase, a prenyltransferase found in thermophilic Euryarchaeota.
Acta Crystallogr D Struct Biol, 76, 2020
5F2D
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Crystal structure of Staphylococcal nuclease variant Delta+PHS I92N/V99T at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Skerritt, L.A, Caro, J.A, Schlessman, J.L, Garcia-Moreno E, B.
登録日2015-12-01
公開日2015-12-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS I92N/V99T at cryogenic temperature
To be Published
391D
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STRUCTURAL VARIABILITY AND NEW INTERMOLECULAR INTERACTIONS OF Z-DNA IN CRYSTALS OF D(PCPGPCPGPCPG)
分子名称: DNA (5'-D(P*CP*GP*CP*GP*CP*G)-3')
著者Malinina, L, Tereshko, V, Ivanova, E, Subirana, J.A, Zarytova, V, Nekrasov, Y.
登録日1998-04-20
公開日1998-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural variability and new intermolecular interactions of Z-DNA in crystals of d(pCpGpCpGpCpG).
Biophys.J., 74, 1998
6ND7
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BU of 6nd7 by Molmil
The crystal structure of TerB co-crystallized with polyporic acid
分子名称: 2~3~,2~6~-dihydroxy[1~1~,2~1~:2~4~,3~1~-terphenyl]-2~2~,2~5~-dione, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Clinger, J.A, Elshahawi, S.I, Zhang, Y, Hall, R.P, Liu, Y, Thorson, J.S, Phillips Jr, G.N.
登録日2018-12-13
公開日2019-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Structure and Function of Terfestatin Biosynthesis Enzymes TerB and TerC
To Be Published
6NJS
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Stat3 Core in complex with compound SD36
分子名称: Signal transducer and activator of transcription 3, [(2-{[(5S,8S,10aR)-3-acetyl-8-({(2S)-5-amino-1-[(diphenylmethyl)amino]-1,5-dioxopentan-2-yl}carbamoyl)-6-oxodecahydropyrrolo[1,2-a][1,5]diazocin-5-yl]carbamoyl}-1H-indol-5-yl)(difluoro)methyl]phosphonic acid (non-preferred name)
著者Meagher, J.L, Stuckey, J.A.
登録日2019-01-04
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Potent and Selective Small-Molecule Degrader of STAT3 Achieves Complete Tumor Regression In Vivo.
Cancer Cell, 36, 2019

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