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PDB: 6647 件

3IJQ
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Structure of dipeptide epimerase from Bacteroides thetaiotaomicron complexed with L-Ala-D-Glu; productive substrate binding.
分子名称: ALANINE, D-GLUTAMIC ACID, MAGNESIUM ION, ...
著者Fedorov, A.A, Fedorov, E.V, Lukk, T, Gerlt, J.A, Almo, S.C.
登録日2009-08-04
公開日2010-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3ID8
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Ternary complex of human pancreatic glucokinase crystallized with activator, glucose and AMP-PNP
分子名称: 2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL)SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE, Glucokinase, MAGNESIUM ION, ...
著者Petit, P, Gluais, L, Lagarde, A, Boutin, J.A, Ferry, G, Vuillard, L.
登録日2009-07-20
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The active conformation of human glucokinase is not altered by allosteric activators
Acta Crystallogr.,Sect.D, 67, 2011
3IFB
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NMR STUDY OF HUMAN INTESTINAL FATTY ACID BINDING PROTEIN
分子名称: INTESTINAL FATTY ACID BINDING PROTEIN
著者Zhang, F, Luecke, C, Baier, L.J, Sacchettini, J.C, Hamilton, J.A.
登録日1998-10-16
公開日1998-10-21
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of human intestinal fatty acid binding protein: implications for ligand entry and exit.
J.Biomol.NMR, 9, 1997
2NOD
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BU of 2nod by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH TETRAHYDROBIOPTERIN AND WATER BOUND IN ACTIVE CENTER
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, NITRIC OXIDE SYNTHASE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
登録日1998-03-05
公開日1999-03-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of nitric oxide synthase oxygenase dimer with pterin and substrate.
Science, 279, 1998
3IFX
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Crystal structure of the Spin-labeled KcsA mutant V48R1
分子名称: POTASSIUM ION, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, TETRABUTYLAMMONIUM ION, ...
著者Cieslak, J.A, Focia, P.J, Gross, A.
登録日2009-07-26
公開日2010-02-09
最終更新日2023-09-06
実験手法EPR (3.56 Å), X-RAY DIFFRACTION
主引用文献Electron Spin-Echo Envelope Modulation (ESEEM) Reveals Water and Phosphate Interactions with the KcsA Potassium Channel
Biochemistry, 49, 2010
3IWE
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BU of 3iwe by Molmil
Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD85646
分子名称: 2,6-dichloro-4-(2-piperazin-1-ylpyridin-4-yl)-N-(1,3,5-trimethyl-1H-pyrazol-4-yl)benzenesulfonamide, Glycylpeptide N-tetradecanoyltransferase 1, TETRADECANOYL-COA
著者Qiu, W, Hutchinson, A, Wernimont, A, Lin, Y.-H, Kania, A, Ravichandran, M, Kozieradzki, I, Cossar, D, Schapira, M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Wyatt, P.G, Ferguson, M.A.J, Frearson, J.A, Brand, S.Y, Robinson, D.A, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2009-09-02
公開日2009-09-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD85646
To be Published
7L7K
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Cryo-EM structure of protein encoded by vaccine candidate BNT162b2
分子名称: Spike glycoprotein
著者Lees, J.A, Han, S.
登録日2020-12-28
公開日2021-02-24
最終更新日2021-04-21
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献BNT162b vaccines protect rhesus macaques from SARS-CoV-2.
Nature, 592, 2021
3IJL
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Structure of dipeptide epimerase from Bacteroides thetaiotaomicron complexed with L-Pro-D-Glu; nonproductive substrate binding.
分子名称: D-GLUTAMIC ACID, MAGNESIUM ION, Muconate cycloisomerase, ...
著者Fedorov, A.A, Fedorov, E.V, Lukk, T, Gerlt, J.A, Almo, S.C.
登録日2009-08-04
公開日2010-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3I7R
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BU of 3i7r by Molmil
Dihydrodipicolinate synthase - K161R
分子名称: CHLORIDE ION, Dihydrodipicolinate synthase, GLYCEROL, ...
著者Dobson, R.C.J, Jameson, G.B, Gerrard, J.A, Soares da Costa, T.P.
登録日2009-07-08
公開日2010-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献How essential is the 'essential' active-site lysine in dihydrodipicolinate synthase?
Biochimie, 92, 2010
3IU1
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Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA
分子名称: Glycylpeptide N-tetradecanoyltransferase 1, TETRADECANOYL-COA
著者Qiu, W, Hutchinson, A, Wernimont, A, Lin, Y.-H, Kania, A, Ravichandran, M, Kozieradzki, I, Cossar, D, Schapira, M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Wyatt, P.G, Ferguson, M.A.J, Frearson, J.A, Brand, S.Y, Robinson, D.A, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2009-08-29
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA
To be Published
3IDH
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BU of 3idh by Molmil
Human pancreatic glucokinase in complex with glucose
分子名称: Glucokinase, POTASSIUM ION, alpha-D-glucopyranose
著者Petit, P, Gluais, L, Lagarde, A, Boutin, J.A, Ferry, G, Vuillard, L.
登録日2009-07-21
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献The active conformation of human glucokinase is not altered by allosteric activators
Acta Crystallogr.,Sect.D, 67, 2011
3I7S
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BU of 3i7s by Molmil
Dihydrodipicolinate synthase mutant - K161A - with the substrate pyruvate bound in the active site.
分子名称: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
著者Dobson, R.C.J, Jameson, G.B, Gerrard, J.A, Soares da Costa, T.P.
登録日2009-07-08
公開日2010-04-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献How essential is the 'essential' active-site lysine in dihydrodipicolinate synthase?
Biochimie, 92, 2010
3IK2
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BU of 3ik2 by Molmil
Crystal Structure of a Glycoside Hydrolase Family 44 Endoglucanase produced by Clostridium acetobutylium ATCC 824
分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Warner, C.D, Hoy, J.A, Ford, C.F, Honzatko, R.B, Reilly, P.J.
登録日2009-08-05
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Tertiary structure and characterization of a glycoside hydrolase family 44 endoglucanase from Clostridium acetobutylicum.
Appl.Environ.Microbiol., 76, 2010
3JZU
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BU of 3jzu by Molmil
Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583 complexed with Mg and dipeptide L-Leu-L-Tyr
分子名称: Dipeptide Epimerase, LEUCINE, MAGNESIUM ION, ...
著者Fedorov, A.A, Fedorov, E.V, Imker, H.J, Sakai, A, Gerlt, J.A, Almo, S.C.
登録日2009-09-24
公開日2010-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3K90
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BU of 3k90 by Molmil
The Abscisic acid receptor PYR1 in complex with Abscisic Acid
分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ACETIC ACID, GLYCEROL, ...
著者Dupeux, F.D, Santiago, J, Rodriguez, P.L, Marquez, J.A.
登録日2009-10-15
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The abscisic acid receptor PYR1 in complex with abscisic acid.
Nature, 462, 2009
3KBK
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Epi-isozizaene synthase complexed with Hg
分子名称: CHLORIDE ION, Epi-isozizaene synthase, MERCURY (II) ION, ...
著者Aaron, J.A, Lin, X, Cane, D.E, Christianson, D.W.
登録日2009-10-20
公開日2010-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Epi-Isozizaene Synthase from Streptomyces coelicolor A3(2), a Platform for New Terpenoid Cyclization Templates
Biochemistry, 49, 2010
3JZT
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BU of 3jzt by Molmil
Structure of a cubic crystal form of X (ADRP) domain from FCoV with ADP-ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, CHLORIDE ION, SODIUM ION, ...
著者Wojdyla, J.A, Manolaridis, I, Tucker, P.A.
登録日2009-09-24
公開日2010-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.91 Å)
主引用文献Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009
3K8Z
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Crystal Structure of Gudb1 a decryptified secondary glutamate dehydrogenase from B. subtilis
分子名称: NAD-specific glutamate dehydrogenase
著者Gunka, K, Newman, J.A, Commichau, F.M, Herzberg, C, Rodrigues, C, Hewitt, L, Lewis, R.J, Stulke, J.
登録日2009-10-15
公開日2010-06-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Functional dissection of a trigger enzyme: mutations of the bacillus subtilis glutamate dehydrogenase RocG that affect differentially its catalytic activity and regulatory properties
J.Mol.Biol., 400, 2010
3KB9
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Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Aaron, J.A, Lin, X, Cane, D.E, Christianson, D.W.
登録日2009-10-20
公開日2010-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Structure of Epi-Isozizaene Synthase from Streptomyces coelicolor A3(2), a Platform for New Terpenoid Cyclization Templates
Biochemistry, 49, 2010
3KB7
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Crystal structure of Polo-like kinase 1 in complex with a pyrazoloquinazoline inhibitor
分子名称: 8-{[2-methoxy-5-(4-methylpiperazin-1-yl)phenyl]amino}-1-methyl-4,5-dihydro-1H-pyrazolo[4,3-h]quinazoline-3-carboxamide, L(+)-TARTARIC ACID, Serine/threonine-protein kinase PLK1, ...
著者Bossi, R.T, Bertrand, J.A.
登録日2009-10-20
公開日2010-05-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of 4,5-dihydro-1H-pyrazolo[4,3-h]quinazoline derivatives as a new class of orally and selective Polo-like kinase 1 inhibitors
J.Med.Chem., 53, 2010
3KFK
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Crystal structures of a group II chaperonin from Methanococcus maripaludis
分子名称: Chaperonin, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Pereira, J.H, Ralston, C.Y, Douglas, N, Meyer, D, Knee, K.M, Goulet, D.R, King, J.A, Frydman, J, Adams, P.D.
登録日2009-10-27
公開日2010-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (6.003 Å)
主引用文献Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
3L3P
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Crystal structure of the C-terminal domain of Shigella type III effector IpaH9.8, with a novel domain swap
分子名称: IpaH9.8
著者Seyedarabi, A, Sullivan, J.A, Sasakawa, C, Pickersgill, R.W.
登録日2009-12-17
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A disulfide driven domain swap switches off the activity of Shigella IpaH9.8 E3 ligase
Febs Lett., 584, 2010
3L41
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Crystal Structure of S. pombe Brc1 BRCT5-BRCT6 domains in complex with phosphorylated H2A
分子名称: BRCT-containing protein 1, phosphorylated H2A tail
著者Williams, R.S, Williams, J.S, Guenther, G, Tainer, J.A.
登録日2009-12-18
公開日2010-02-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献gammaH2A binds Brc1 to maintain genome integrity during S-phase.
Embo J., 29, 2010
3KCG
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Crystal structure of the antithrombin-factor IXa-pentasaccharide complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3,4-di-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranose-(1-4)-2,3-di-O-methyl-beta-D-glucopyranuronic acid-(1-4)-2,3,6-tri-O-sulfo-alpha-D-glucopyranose-(1-4)-3-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2,3,6-tri-O-sulfo-alpha-D-glucopyranoside, Antithrombin-III, ...
著者Huntington, J.A, Johnson, D.J.D.
登録日2009-10-21
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of factor IXa recognition by heparin-activated antithrombin revealed by a 1.7-A structure of the ternary complex.
Proc.Natl.Acad.Sci.USA, 107, 2010
4ALD
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HUMAN MUSCLE FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE COMPLEXED WITH FRUCTOSE 1,6-BISPHOSPHATE
分子名称: 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), FRUCTOSE-BISPHOSPHATE ALDOLASE
著者Dalby, A.R, Dauter, Z, Littlechild, J.A.
登録日1998-07-26
公開日1999-03-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of human muscle aldolase complexed with fructose 1,6-bisphosphate: mechanistic implications.
Protein Sci., 8, 1999

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