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PDB: 42745 results

2DR2
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BU of 2dr2 by Molmil
Structure of human tryptophanyl-tRNA synthetase in complex with tRNA(Trp)
Descriptor: SULFATE ION, TRYPTOPHAN, Tryptophanyl-tRNA synthetase, ...
Authors:Shen, N, Guo, L, Yang, B, Jin, Y, Ding, J.
Deposit date:2006-06-05
Release date:2006-07-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of human tryptophanyl-tRNA synthetase in complex with tRNA(Trp) reveals the molecular basis of tRNA recognition and specificity
Nucleic Acids Res., 34, 2006
3QG1
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BU of 3qg1 by Molmil
Crystal structure of P-loop G239A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, V-type ATP synthase alpha chain
Authors:Ragunathan, P, Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-24
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
2DSD
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BU of 2dsd by Molmil
Crystal structure of human ADP-ribose pyrophosphatase NUDT5 in complex with magnesium and AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ADP-sugar pyrophosphatase, MAGNESIUM ION
Authors:Zha, M, Zhong, C, Ding, J.
Deposit date:2006-06-28
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Human NUDT5 Reveal Insights into the Structural Basis of the Substrate Specificity
J.Mol.Biol., 364, 2006
2DT1
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BU of 2dt1 by Molmil
Crystal Structure Of The Complex Of Goat Signalling Protein With Tetrasaccharide At 2.09 A Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2006-07-09
Release date:2006-08-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Carbohydrate-binding properties of goat secretory glycoprotein (SPG-40) and its functional implications: structures of the native glycoprotein and its four complexes with chitin-like oligosaccharides
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
1RRP
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BU of 1rrp by Molmil
STRUCTURE OF THE RAN-GPPNHP-RANBD1 COMPLEX
Descriptor: MAGNESIUM ION, NUCLEAR PORE COMPLEX PROTEIN NUP358, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Vetter, I.R, Nowak, C, Nishimoto, T, Kuhlmann, J, Wittinghofer, A.
Deposit date:1999-01-15
Release date:1999-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Structure of a Ran-binding domain complexed with Ran bound to a GTP analogue: implications for nuclear transport.
Nature, 398, 1999
3Q6V
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BU of 3q6v by Molmil
Crystal Structure of Serratia fonticola Sfh-I: glycerol complex
Descriptor: Beta-lactamase, GLYCEROL, ZINC ION
Authors:Fonseca, F, Saavedra, M.J, Correia, A, Spencer, J.
Deposit date:2011-01-03
Release date:2011-07-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of Serratia fonticola Sfh-I: activation of the nucleophile in mono-zinc metallo-beta-lactamases.
J.Mol.Biol., 411, 2011
2LUA
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BU of 2lua by Molmil
Solution structure of CXC domain of MSL2
Descriptor: Protein male-specific lethal-2, ZINC ION
Authors:Feng, Y, Ye, K, Zheng, S, Wang, J.
Deposit date:2012-06-09
Release date:2012-10-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of MSL2 CXC Domain Reveals an Unusual Zn(3)Cys(9) Cluster and Similarity to Pre-SET Domains of Histone Lysine Methyltransferases.
Plos One, 7, 2012
2DSM
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BU of 2dsm by Molmil
NMR Structure of Bacillus Subtilis Protein YqaI, Northeast Structural Genomics Target SR450
Descriptor: Hypothetical protein yqaI
Authors:Ramelot, T.A, Cort, J.R, Wang, D, Janua, H, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Baran, M, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-07-01
Release date:2006-08-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR Structure of Bacillus Subtilis Protein YqaI, Northeast Structural Genomics Target SR450
to be published
1D6K
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BU of 1d6k by Molmil
NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX
Descriptor: 5S RRNA E-LOOP (5SE), RIBOSOMAL PROTEIN L25
Authors:Stoldt, M, Wohnert, J, Ohlenschlager, O, Gorlach, M, Brown, L.R.
Deposit date:1999-10-14
Release date:1999-11-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The NMR structure of the 5S rRNA E-domain-protein L25 complex shows preformed and induced recognition.
EMBO J., 18, 1999
2DPK
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BU of 2dpk by Molmil
The Crystal Structure of the Primary Ca2+ Sensor of the Na+/Ca2+ Exchanger
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, GUANIDINE, ...
Authors:Abramson, J, Sawaya, M.
Deposit date:2006-05-12
Release date:2006-06-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the primary Ca2+ sensor of the na+/ca2+ exchanger reveals a novel Ca2+ binding motif.
J.Biol.Chem., 281, 2006
2LUS
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BU of 2lus by Molmil
NMR structure of Carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor NF-kB activity
Descriptor: Thioredoxion
Authors:Giri, P.K, Fan, J, Kunchithapadam, S, Sivaraman, J.
Deposit date:2012-06-21
Release date:2012-07-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of Carcinoscorpius rotundicauda thioredoxin-related protein 16 and its role in regulating transcription factor NF-kB activity.
J.Biol.Chem., 287, 2012
3QIL
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BU of 3qil by Molmil
Crystal structure analysis of the clathrin trimerization domain
Descriptor: Clathrin heavy chain 1
Authors:Ybe, J.A, Mishra, S, Nix, J.
Deposit date:2011-01-27
Release date:2012-02-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.92 Å)
Cite:Nuclear localization of clathrin involves a labile helix outside the trimerization domain.
Febs Lett., 587, 2013
4KEH
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BU of 4keh by Molmil
Crosslinked Crystal Structure of Type II Fatty Synthase Dehydratase, FabA, and Acyl Carrier Protein, AcpP
Descriptor: Acyl carrier protein, N-{3-[DIHYDROXY(NONYL)-LAMBDA~4~-SULFANYL]PROPYL}-N~3~-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANINAMIDE, N-{3-[dihydroxy(nonyl)-lambda~4~-sulfanyl]propyl}-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
Authors:Nguyen, C, Haushalter, R, Finzel, K, Leong, J, Le, B.C, Burkart, M, Tsai, S.C.
Deposit date:2013-04-25
Release date:2013-12-25
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Trapping the dynamic acyl carrier protein in fatty acid biosynthesis.
Nature, 505, 2014
2DT3
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BU of 2dt3 by Molmil
Crystal structure of the complex formed between goat signalling protein and the hexasaccharide at 2.28 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 1, alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Singh, T.P.
Deposit date:2006-07-09
Release date:2006-08-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Carbohydrate-binding properties of goat secretory glycoprotein (SPG-40) and its functional implications: structures of the native glycoprotein and its four complexes with chitin-like oligosaccharides
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2DAU
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BU of 2dau by Molmil
DICKERSON-DREW DNA DODECAMER, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Denisov, A, Bekiroglu, S, Maltseva, T, Sandstrom, A, Altmann, K.-H, Egli, M, Chattopadhyaya, J.
Deposit date:1998-01-20
Release date:1998-05-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution conformation of a carbocyclic analog of the Dickerson-Drew dodecamer: comparison with its own X-ray structure and that of the NMR structure of the native counterpart.
J.Biomol.Struct.Dyn., 16, 1998
1CJ1
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BU of 1cj1 by Molmil
GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2 DOMAIN (HUMAN) COMPLEXED WITH A PHOSPHOTYROSYL DERIVATIVE
Descriptor: PROTEIN (GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2), [1-[1-(6-CARBAMOYL-CYCLOHEX-2-ENYLCARBAMOYL)-CYCLOHEXYLCARBAMOYL]-2-(4-PHOSPHONOOXY-PHENYL)- ETHYL]-CARBAMIC ACID 3-AMINOBENZYLESTER
Authors:Rahuel, J.
Deposit date:1999-04-21
Release date:1999-12-22
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-based design, synthesis, and X-ray crystallography of a high-affinity antagonist of the Grb2-SH2 domain containing an asparagine mimetic.
J.Med.Chem., 42, 1999
3QIA
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BU of 3qia by Molmil
Crystal structure of P-loop G237A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Ragunathan, P, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-26
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
1SJJ
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BU of 1sjj by Molmil
Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin
Descriptor: actinin
Authors:Liu, J, Taylor, D.W, Taylor, K.A.
Deposit date:2004-03-03
Release date:2004-03-23
Last modified:2024-02-14
Method:ELECTRON CRYSTALLOGRAPHY (20 Å)
Cite:A 3-D Reconstruction of Smooth Muscle alpha-Actinin by CryoEm Reveals Two Different Conformations at the Actin-binding Region.
J.Mol.Biol., 338, 2004
1CQ8
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BU of 1cq8 by Molmil
ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C6-PYRIDOXAL-5P-PHOSPHATE
Descriptor: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-HEXANOIC ACID, ASPARTATE AMINOTRANSFERASE (2.6.1.1)
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-06
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
2GBH
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BU of 2gbh by Molmil
NMR structure of stem region of helix-35 of 23S E.coli ribosomal RNA (residues 736-760)
Descriptor: 5'-R(*(GMP)P*GP*GP*CP*UP*AP*AP*UP*GP*(PSU)P*UP*GP*AP*AP*AP*AP*AP*UP*UP*AP*GP*CP*CP*C)-3'
Authors:Bax, A, Boisbouvier, J, Bryce, D, Grishaev, A, Jaroniec, C, Miclet, E, Nikonovicz, E, O'Neil-Cabello, E, Ying, J.
Deposit date:2006-03-10
Release date:2006-04-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Measurement of five dipolar couplings from a single 3D NMR multiplet applied to the study of RNA dynamics.
J.Am.Chem.Soc., 126, 2004
2GBO
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BU of 2gbo by Molmil
Protein of Unknown Function EF2458 from Enterococcus faecalis
Descriptor: UPF0358 protein EF2458
Authors:Osipiuk, J, Wu, R, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-10
Release date:2006-04-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structure of conserved hypothetical protein EF_2458 from Enterococcus faecalis.
To be Published
3Q5L
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BU of 3q5l by Molmil
Crystal structure of the amino-terminal domain of HSP90 from Leishmania major, LMJF33.0312:M1-K 213 in the presence of 17-AEP-geldanamycin
Descriptor: (4E,6Z,8S,9S,10E,12S,13R,14S,16R)-13-hydroxy-8,14-dimethoxy-4,10,12,16-tetramethyl-3,20,22-trioxo-19-{[2-(pyrrolidin-1-yl)ethyl]amino}-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18-pentaen-9-yl carbamate, Heat shock protein 83-1
Authors:Wernimont, A.K, Tempel, W, Lin, Y.H, Hutchinson, A, MacKenzie, F, Fairlamb, A, Cossar, D, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Ferguson, M.A.J, Hui, R, Pizarro, J.C, Hills, T, Structural Genomics Consortium (SGC)
Deposit date:2010-12-28
Release date:2011-02-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of the amino-terminal domain of HSP90 from Leishmania major, LMJF33.0312:M1-K 213 in the presence of 17-AEP-geldanamycin.
To be Published
2GHV
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BU of 2ghv by Molmil
Crystal structure of SARS spike protein receptor binding domain
Descriptor: Spike glycoprotein
Authors:Hwang, W.C, Lin, Y, Santelli, E, Sui, J, Jaroszewski, L, Stec, B, Farzan, M, Marasco, W.A, Liddington, R.C.
Deposit date:2006-03-27
Release date:2006-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of neutralization by a human anti-severe acute respiratory syndrome spike protein antibody, 80R.
J.Biol.Chem., 281, 2006
1E1A
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BU of 1e1a by Molmil
Crystal structure of DFPase from Loligo vulgaris
Descriptor: CALCIUM ION, DIISOPROPYLFLUOROPHOSPHATASE
Authors:Koepke, J, Scharff, E.I, Fritzsch, G, Luecke, C, Rueterjans, H.
Deposit date:2000-04-28
Release date:2001-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Diisopropylfluorophosphatase from Loligo Vulgaris
Structure, 9, 2001
1E4G
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BU of 1e4g by Molmil
FtsA (ATP-bound form) from Thermotoga maritima
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CELL DIVISION PROTEIN FTSA, MAGNESIUM ION
Authors:van den Ent, F, Lowe, J.
Deposit date:2000-07-03
Release date:2000-10-18
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Cell Division Protein Ftsa from Thermotoga Maritima
Embo J., 19, 2000

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數據於2024-09-25公開中

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