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PDB: 42745 results

5MEI
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BU of 5mei by Molmil
Crystal structure of Agelastatin A bound to the 80S ribosome
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:McClary, B, Zinshteyn, B, Meyer, M, Jouanneau, M, Pellegrino, S, Yusupova, G, Schuller, A, Reyes, J.C.P, Lu, J, Luo, C, Dang, Y, Romo, D, Yusupov, M, Green, R, Liu, J.O.
Deposit date:2016-11-15
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Inhibition of Eukaryotic Translation by the Antitumor Natural Product Agelastatin A.
Cell Chem Biol, 24, 2017
5GRE
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BU of 5gre by Molmil
Crystal structure of the alpha gamma heterodimer of human IDH3 in complex with Mg(2+), citrate and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CITRIC ACID, Isocitrate dehydrogenase [NAD] subunit alpha, ...
Authors:Ma, T, Peng, Y, Ding, J.
Deposit date:2016-08-11
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Molecular mechanism of the allosteric regulation of the alpha gamma heterodimer of human NAD-dependent isocitrate dehydrogenase.
Sci Rep, 7, 2017
5MUM
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BU of 5mum by Molmil
Glycoside Hydrolase BACINT_00347
Descriptor: 1,2-ETHANEDIOL, BACINT_00347, PENTAETHYLENE GLYCOL
Authors:Munoz-Munoz, J, Cartmell, A, Terrapon, N, Henrissat, B, Gilbert, H.J.
Deposit date:2017-01-13
Release date:2017-04-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unusual active site location and catalytic apparatus in a glycoside hydrolase family.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6FB6
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BU of 6fb6 by Molmil
Crystal Structure of a Tailored I-CreI Homing Endonuclease Protein (3115 variant) in complex with an altered version of its target DNA (Haemoglobin beta subunit gene) at 5NNN region in the presence of Manganese
Descriptor: DNA (5'-D(*TP*CP*AP*GP*AP*CP*TP*TP*GP*TP*CP*CP*AP*C)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*CP*TP*CP*CP*TP*GP*TP*GP*G)-3'), DNA (5'-D(P*AP*CP*AP*AP*GP*TP*CP*TP*GP*A)-3'), ...
Authors:Molina, R, Prieto, J.
Deposit date:2017-12-18
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Understanding the indirect DNA read-out specificity of I-CreI Meganuclease.
Sci Rep, 8, 2018
3TQL
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BU of 3tql by Molmil
Structure of the amino acid ABC transporter, periplasmic amino acid-binding protein from Coxiella burnetii.
Descriptor: ARGININE, Arginine-binding protein, IMIDAZOLE
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-10-05
Last modified:2016-01-20
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
5MON
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BU of 5mon by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with 2-aminopyridine
Descriptor: 2-AMINOPYRIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
Deposit date:2016-12-14
Release date:2017-05-24
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (0.939 Å), X-RAY DIFFRACTION
Cite:Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MOS
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BU of 5mos by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with N-amidinopiperidine
Descriptor: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
Authors:Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
Deposit date:2016-12-14
Release date:2018-02-28
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (0.96 Å), X-RAY DIFFRACTION
Cite:Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
6EWF
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BU of 6ewf by Molmil
Leishmania major N-myristoyltransferase with bound myristoyl-CoA and inhibitor
Descriptor: Glycylpeptide N-tetradecanoyltransferase, N-[2-(3-methoxyphenyl)ethanimidoyl]-2-piperidin-4-yloxy-benzamide, TETRADECANOYL-COA
Authors:Brenk, R, Kehrein, J, Kersten, C.
Deposit date:2017-11-03
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5351733 Å)
Cite:How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 2019
5M5Z
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BU of 5m5z by Molmil
Chaetomium thermophilum beta-1-3-glucanase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-1,3-glucanase, ...
Authors:Papageorgiou, A.C, Chen, J, Li, D.
Deposit date:2016-10-23
Release date:2017-05-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure and biological implications of a glycoside hydrolase family 55 beta-1,3-glucanase from Chaetomium thermophilum.
Biochim. Biophys. Acta, 1865, 2017
5M6O
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BU of 5m6o by Molmil
Frutapin complexed with alpha-D-mannose
Descriptor: Frutapin, alpha-D-mannopyranose
Authors:de Sousa, F.D, Guo, J, Coker, A.R, de Oliveira Monteiro-Moreira, A, de Azevedo Moreira, R.
Deposit date:2016-10-25
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Frutapin, a lectin fromArtocarpus incisa(breadfruit): cloning, expression and molecular insights.
Biosci. Rep., 37, 2017
3TQI
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BU of 3tqi by Molmil
Structure of the GMP synthase (guaA) from Coxiella burnetii
Descriptor: GMP synthase [glutamine-hydrolyzing]
Authors:Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
6EZ7
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BU of 6ez7 by Molmil
Pes4 RRM3 Structure
Descriptor: DI(HYDROXYETHYL)ETHER, Protein PES4
Authors:Mohamad, N, Bravo, J.
Deposit date:2017-11-14
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Pes4 RRM3 Structure
To Be Published
6EZI
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BU of 6ezi by Molmil
PDZK1 domain 4 in complex with C-terminal peptide of human PepT2.
Descriptor: GLYCEROL, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, Solute carrier family 15 member 2
Authors:Loew, C, Flayhan, A, Pieprzyk, J.
Deposit date:2017-11-15
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.503321 Å)
Cite:Probing the Architecture of a Multi-PDZ Domain Protein: Structure of PDZK1 in Solution.
Structure, 26, 2018
5NM2
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BU of 5nm2 by Molmil
A2A Adenosine receptor cryo structure
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
Authors:Weinert, T, Cheng, R, James, D, Gashi, D, Nogly, P, Jaeger, K, Dore, A.S, Geng, T, Cooke, R, Hennig, M, Standfuss, J.
Deposit date:2017-04-05
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons.
Nat Commun, 8, 2017
5GZ1
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BU of 5gz1 by Molmil
Structure of substrate/cofactor-free D-amino acid dehydrogenase
Descriptor: Meso-diaminopimelate D-dehydrogenase
Authors:Sakuraba, H, Seto, T, Hayashi, J, Akita, H, Yoneda, K, Ohshima, T.
Deposit date:2016-09-26
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure-Based Engineering of an Artificially Generated NADP+-Dependent d-Amino Acid Dehydrogenase
Appl. Environ. Microbiol., 83, 2017
5GYY
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BU of 5gyy by Molmil
Plant receptor complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S-locus protein 11, S-receptor kinase SRK9
Authors:Ma, R, Han, Z, Hu, Z, Lin, G, Gong, X, Zhang, H, June, N, Chai, J.
Deposit date:2016-09-24
Release date:2017-09-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:Plant receptor complex at 2.35 Angstroms resolution
To Be Published
6EU5
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BU of 6eu5 by Molmil
Leishmania major N-myristoyltransferase with bound myristoyl-CoA and inhibitor
Descriptor: 4-[3-[(8~{a}~{R})-3,4,6,7,8,8~{a}-hexahydro-1~{H}-pyrrolo[1,2-a]pyrazin-2-yl]propyl]-2,6-bis(chloranyl)-~{N}-methyl-~{N}-(1,3,5-trimethylpyrazol-4-yl)benzenesulfonamide, Glycylpeptide N-tetradecanoyltransferase, TETRADECANOYL-COA
Authors:Brenk, R, Kehrein, J, Kersten, C.
Deposit date:2017-10-27
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.496083 Å)
Cite:How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 2019
5H1B
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BU of 5h1b by Molmil
Human RAD51 presynaptic complex
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA repair protein RAD51 homolog 1, MAGNESIUM ION, ...
Authors:Xu, J, Zhao, L, Xu, Y, Zhao, W, Sung, P, Wang, H.W.
Deposit date:2016-10-08
Release date:2016-12-21
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM structures of human RAD51 recombinase filaments during catalysis of DNA-strand exchange
Nat. Struct. Mol. Biol., 24, 2017
5GO0
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BU of 5go0 by Molmil
Solution structure of nedd8 from Trypanosoma brucei
Descriptor: Ubiquitin, putative
Authors:Wang, R, Liao, S, Zhang, J, Tu, X.
Deposit date:2016-07-25
Release date:2017-07-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of nedd8 from Trypanosoma brucei
To Be Published
6F89
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BU of 6f89 by Molmil
Structure of H234A/Y235A P.abyssi Sua5
Descriptor: BICARBONATE ION, THREONINE, Threonylcarbamoyl-AMP synthase
Authors:Pichard-Kostuch, A, Zhang, W, Liger, D, Daugeron, M.C, Letoquart, J, Li de la Sierra-Gallay, I, Forterre, P, Collinet, B, van Tilbeurgh, H, Basta, T.
Deposit date:2017-12-12
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structure-function analysis of Sua5 protein reveals novel functional motifs required for the biosynthesis of the universal t6A tRNA modification.
RNA, 24, 2018
6FB9
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BU of 6fb9 by Molmil
Crystal Structure of the I-CreI Homing Endonuclease D75N variant in complex with an altered version of its target DNA at 5NNN region in the presence of Manganese
Descriptor: DNA (5'-D(*TP*CP*AP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*C)-3'), DNA (5'-D(*TP*CP*AP*AP*AP*AP*CP*TP*GP*CP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*AP*CP*GP*TP*TP*TP*TP*GP*A)-3'), ...
Authors:Molina, R, Prieto, J.
Deposit date:2017-12-18
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Understanding the indirect DNA read-out specificity of I-CreI Meganuclease.
Sci Rep, 8, 2018
5H4D
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BU of 5h4d by Molmil
Crystal structure of hSIRT3 in complex with a specific agonist Amiodarone hydrochloride
Descriptor: (2-butyl-1-benzofuran-3-yl){4-[2-(diethylamino)ethoxy]-3,5-diiodophenyl}methanone, 7-AMINO-4-METHYL-CHROMEN-2-ONE, ARG-HIS-LYS, ...
Authors:Zhang, S, Fu, L, Liu, J, Liu, B.
Deposit date:2016-10-31
Release date:2017-11-08
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Crystal structure of hSIRT3 in complex with a specific agonist Amiodarone hydrochloride
To Be Published
6EVS
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BU of 6evs by Molmil
Characterization of 2-deoxyribosyltransferase from psychrotolerant bacterium Bacillus psychrosaccharolyticus: a suitable biocatalyst for the industrial synthesis of antiviral and antitumoral nucleosides
Descriptor: N-deoxyribosyltransferase
Authors:Fresco-Tabohada, A, Fernandez-Lucas, J, Acebal, C, Arroyo, M, Ramon, F, Mancheno, J.M, de la Mata, I.
Deposit date:2017-11-02
Release date:2018-11-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:2'-Deoxyribosyltransferase from Bacillus psychrosaccharolyticus: A Mesophilic-Like Biocatalyst for the Synthesis of Modified Nucleosides from a Psychrotolerant Bacterium
Catalysts, 2019
5H5E
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BU of 5h5e by Molmil
The crystal structure of the yeast arginine methyltransferase SFM1 complexed with SAH
Descriptor: Protein arginine N-methyltransferase SFM1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Xie, W, Wang, C, Zeng, J.
Deposit date:2016-11-05
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
FEBS Lett., 591, 2017
5GNR
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BU of 5gnr by Molmil
the structure of mini-MFN1 K88A in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitofusin-1
Authors:Yan, L, Yu, C, Ming, Z, Lou, Z, Rao, Z, Hu, J.
Deposit date:2016-07-24
Release date:2016-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:BDLP-like folding of Mitofusin 1
To Be Published

225399

數據於2024-09-25公開中

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