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PDB: 42745 results

2FBM
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Acetyltransferase domain of CDY1
Descriptor: CHLORIDE ION, Y chromosome chromodomain protein 1, telomeric isoform b
Authors:Min, J.R, Antoshenko, T, Hong, W, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2005-12-09
Release date:2005-12-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal Structure of Acetyltransferases domain of Human Testis-specific chromodomain protein Y 1
To be Published
2FIC
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BU of 2fic by Molmil
The crystal structure of the BAR domain from human Bin1/Amphiphysin II and its implications for molecular recognition
Descriptor: Myc box-dependent-interacting protein 1, XENON
Authors:Casal, E, Federici, L, Zhang, W, Fernandez-Recio, J, Priego, E.M, Miguel, R.N, Duhadaway, J.B, Prendergast, G.C, Luisi, B.F, Laue, E.D.
Deposit date:2005-12-29
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The Crystal Structure of the BAR Domain from Human Bin1/Amphiphysin II and Its Implications for Molecular Recognition
Biochemistry, 45, 2006
6V51
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Spin-labeled T4 Lysozyme (9/131FnbY)-(4-Amino-TEMPO)
Descriptor: 4-amino-2,2,6,6-tetramethylpiperidin-1-ol, Endolysin
Authors:Liu, J, Morizumi, T, Ou, W.L, Wang, L, Ernst, O.P.
Deposit date:2019-12-02
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Genetically Encoded Quinone Methides Enabling Rapid, Site-Specific, and Photocontrolled Protein Modification with Amine Reagents.
J.Am.Chem.Soc., 142, 2020
2FU4
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Crystal Structure of the DNA binding domain of E.coli FUR (Ferric Uptake Regulator)
Descriptor: CADMIUM ION, CHLORIDE ION, Ferric uptake regulation protein, ...
Authors:Pecqueur, L, D'Autreaux, B, Dupuy, J, Nicolet, Y, Jacquamet, L, Brutscher, B, Michaud-Soret, I, Bersch, B.
Deposit date:2006-01-26
Release date:2006-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural changes of Escherichia coli ferric uptake regulator during metal-dependent dimerization and activation explored by NMR and X-ray crystallography
J.Biol.Chem., 281, 2006
2FWU
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Second Ca2+ binding domain of the Na,Ca-exchanger (NCX1)
Descriptor: CALCIUM ION, Sodium/calcium exchanger 1
Authors:Hilge, M, Vuister, G.W, Aelen, J.
Deposit date:2006-02-03
Release date:2006-04-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Ca(2+) regulation in the na(+)/ca(2+) exchanger involves two markedly different ca(2+) sensors
Mol.Cell, 22, 2006
6V8W
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CDYL2 chromodomain in complex with a synthetic peptide
Descriptor: Chromodomain Y-like protein 2, IVA-PHE-ALA-PHE-5T3-SER-NH2, UNKNOWN ATOM OR ION
Authors:Dong, C, Tempel, W, James, L.I, Lamb, K.N, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Min, J, Structural Genomics Consortium, Structural Genomics Consortium (SGC)
Deposit date:2019-12-12
Release date:2020-01-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for the Binding Selectivity of Human CDY Chromodomains.
Cell Chem Biol, 27, 2020
2G41
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Crystal structure of the complex of sheep signalling glycoprotein with chitin trimer at 3.0A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SIGNAL PROCESSING PROTEIN, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Srivastava, D.B, Ethayathulla, A.S, Kumar, J, Bhushan, A, Sharma, S, Singh, T.P.
Deposit date:2006-02-21
Release date:2006-04-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Carbohydrate binding properties and carbohydrate induced conformational switch in sheep secretory glycoprotein (SPS-40): crystal structures of four complexes of SPS-40 with chitin-like oligosaccharides
J.Struct.Biol., 158, 2007
6V9O
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Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Descriptor: 3-(phenylsulfonyl)benzene-1-sulfonamide, FORMIC ACID, GLYCEROL, ...
Authors:Phan, J, Fesik, S.W.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
To Be Published
1Q2E
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BU of 1q2e by Molmil
CELLOBIOHYDROLASE CEL7A WITH LOOP DELETION 245-252 AND BOUND NON-HYDROLYSABLE CELLOTETRAOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, EXOCELLOBIOHYDROLASE I, ...
Authors:Stahlberg, J, Harris, M, Jones, T.A.
Deposit date:2003-07-24
Release date:2003-11-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Engineering the exo-loop of Trichoderma reesei cellobiohydrolase, Cel7A. A comparison with Phanerochaete chrysosporium Cel7D
J.Mol.Biol., 333, 2003
3PI1
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BU of 3pi1 by Molmil
Crystallographic Structure of HbII-oxy from Lucina pectinata at pH 9.0
Descriptor: Hemoglobin II, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gavira, J.A, Nieves-Marrero, C.A, Ruiz-Martinez, C.R, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
1Q4K
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BU of 1q4k by Molmil
The polo-box domain of Plk1 in complex with a phospho-peptide
Descriptor: Phospho-peptide sequence Met.Gln.Ser.pThr.Pro.Leu, Serine/threonine-protein kinase PLK
Authors:Cheng, K, Lowe, E.D, Sinclair, J, Nigg, E.A, Johnson, L.N.
Deposit date:2003-08-04
Release date:2003-11-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of the human polo-like kinase-1 polo box domain and its phospho-peptide complex.
Embo J., 22, 2003
4IID
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BU of 4iid by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with 1-deoxynojirimycin
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-DEOXYNOJIRIMYCIN, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
2G9A
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BU of 2g9a by Molmil
Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5
Descriptor: Histone H3, WD-repeat protein 5
Authors:Chai, J, Han, Z, Wang, H, Shen, Y.
Deposit date:2006-03-06
Release date:2006-09-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5
To be published
6VFQ
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Crystal structure of monomeric human protocadherin 10 EC1-EC4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Harrison, O.J, Brasch, J, Shapiro, L.
Deposit date:2020-01-06
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Family-wide Structural and Biophysical Analysis of Binding Interactions among Non-clustered delta-Protocadherins.
Cell Rep, 30, 2020
6VFV
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Crystal structure of human protocadherin 8 EC5-EC6
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Harrison, O.J, Brasch, J, Shapiro, L.
Deposit date:2020-01-06
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Family-wide Structural and Biophysical Analysis of Binding Interactions among Non-clustered delta-Protocadherins.
Cell Rep, 30, 2020
6V9W
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BU of 6v9w by Molmil
Structure of TRPA1 (ligand-free) with bound calcium, LMNG
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily A member 1
Authors:Zhao, J, Lin King, J.V, Paulsen, C.E, Cheng, Y, Julius, D.
Deposit date:2019-12-16
Release date:2020-05-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Irritant-evoked activation and calcium modulation of the TRPA1 receptor.
Nature, 585, 2020
2FS4
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BU of 2fs4 by Molmil
Ketopiperazine-Based Renin Inhibitors: Optimization of the C ring
Descriptor: (6R)-6-({[1-(3-HYDROXYPROPYL)-1,7-DIHYDROQUINOLIN-7-YL]OXY}METHYL)-1-(4-{3-[(2-METHOXYBENZYL)OXY]PROPOXY}PHENYL)PIPERAZIN-2-ONE, Renin
Authors:Holsworth, D.D, Cai, C, Cheng, X.-M, Cody, W.L, Downing, D.M, Erasga, N, Lee, C, Powell, N.A, Edmunds, J.J, Stier, M, Jalaie, M, Zhang, E, McConnell, P, Ryan, M.J, Bryant, J, Li, T, Kasani, A, Hall, E, Subedi, R, Rahim, M, Maiti, S.
Deposit date:2006-01-20
Release date:2006-06-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ketopiperazine-Based Renin Inhibitors: Optimization of the "C" Ring
BIOORG.MED.CHEM.LETT., 16, 2006
2G9Y
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BU of 2g9y by Molmil
Structure of S102T E. coli alkaline phosphatase in presence of phosphate at 2.00 A resolution
Descriptor: Alkaline phosphatase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Wang, J, Kantrowitz, E.R.
Deposit date:2006-03-07
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Trapping the tetrahedral intermediate in the alkaline phosphatase reaction by substitution of the active site serine with threonine.
Protein Sci., 15, 2006
4IIG
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BU of 4iig by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with D-glucose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
6VGG
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Crystal structure of the DNA binding domains of human transcription factor ERG, human Runx2 bound to core binding factor beta (Cbfb), and mithramycin, in complex with 16mer DNA CAGAGGATGTGGCTTC
Descriptor: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
Authors:Hou, C, Rohr, J, Tsodikov, O.V.
Deposit date:2020-01-08
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.31 Å)
Cite:Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
6VB1
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HLA-B*15:02 complexed with a synthetic peptide
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Schutte, R.J, Li, D, Andring, J, McKenna, R, Ostrov, D.A.
Deposit date:2019-12-18
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:HLA-B*15:02 complexed with a synthetic peptide
To Be Published
5OVE
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BU of 5ove by Molmil
Ras guanine nucleotide exchange factor SOS1 (Rem-cdc25) in complex with small molecule inhibitor compound 1
Descriptor: 1,2-ETHANEDIOL, 6,7-dimethoxy-~{N}-[(1~{R})-1-naphthalen-1-ylethyl]quinazolin-4-amine, Son of sevenless homolog 1
Authors:Hillig, R.C, Sautier, B, Schroeder, J, Moosmayer, D, Hilpmann, A, Stegmann, C.M, Briem, H, Boemer, U, Weiske, J, Badock, V, Petersen, K, Kahmann, J, Wegener, D, Bohnke, N, Eis, K, Graham, K, Wortmann, L, von Nussbaum, F, Bader, B.
Deposit date:2017-08-28
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of potent SOS1 inhibitors that block RAS activation via disruption of the RAS-SOS1 interaction.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
2FVV
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Human Diphosphoinositol polyphosphate phosphohydrolase 1
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Hallberg, B.M, Kursula, P, Ogg, D, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Graslund, S, Hammarstrom, M, Hogbom, M, Holmberg-Schiavone, L, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van den Berg, S, Weigelt, J, Persson, C, Structural Genomics Consortium (SGC)
Deposit date:2006-01-31
Release date:2006-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of human diphosphoinositol phosphatase 1
Proteins, 77, 2009
2FW2
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Catalytic domain of CDY
Descriptor: Testis-specific chromodomain protein Y 2
Authors:Min, J.R, Antoshenko, T, Wu, H, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-01-31
Release date:2006-02-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of catalytic domain of Human Testis-specific chromodomain protein Y.
To be Published
1RTW
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BU of 1rtw by Molmil
X-ray Structure of PF1337, a TenA Homologue from Pyrococcus furiosus. Northeast Structural Genomics Research Consortium (Nesg) Target PFR34
Descriptor: (4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL DIHYDROGEN PHOSPHATE, PHOSPHATE ION, transcriptional activator, ...
Authors:Benach, J, Edstrom, W.C, Lee, I, Rong, X, Acton, T.B, Montelione, G.T, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-12-10
Release date:2004-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The 2.35 A structure of the TenA homolog from Pyrococcus furiosus supports an enzymatic function in thiamine metabolism.
Acta Crystallogr.,Sect.D, 61, 2005

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数据于2024-09-25公开中

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