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PDB: 42745 results

4IML
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BU of 4iml by Molmil
CrossFab binding to human Angiopoietin 2
Descriptor: Crossed heavy chain (VH-Ckappa), Crossed light chain (VL-CH1), GLYCEROL
Authors:Fenn, S, Schiller, C, Griese, J, Hopfner, K.-P, Kettenberger, H.
Deposit date:2013-01-03
Release date:2013-04-17
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (2.931 Å)
Cite:Crystal Structure of an Anti-Ang2 CrossFab Demonstrates Complete Structural and Functional Integrity of the Variable Domain.
Plos One, 8, 2013
6TR8
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BU of 6tr8 by Molmil
Corynebacterium diphtheriae methionine sulfoxide reductase B (MsrB) solution structure - reduced form
Descriptor: Peptide-methionine (R)-S-oxide reductase, ZINC ION
Authors:Volkov, A.N, Tossounian, M.A, Buts, L, Messens, J.
Deposit date:2019-12-18
Release date:2020-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Methionine sulfoxide reductase B fromCorynebacterium diphtheriaecatalyzes sulfoxide reduction via an intramolecular disulfide cascade.
J.Biol.Chem., 295, 2020
1NOY
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BU of 1noy by Molmil
DNA POLYMERASE (E.C.2.7.7.7)/DNA COMPLEX
Descriptor: DNA (5'-D(*TP*TP*T)-3'), MANGANESE (II) ION, PROTEIN (DNA POLYMERASE (E.C.2.7.7.7)), ...
Authors:Wang, J, Yu, P, Lin, T.C, Konigsberg, W.H, Steitz, T.A.
Deposit date:1996-02-16
Release date:1996-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of an NH2-terminal fragment of T4 DNA polymerase and its complexes with single-stranded DNA and with divalent metal ions.
Biochemistry, 35, 1996
4IN9
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BU of 4in9 by Molmil
Structure of karilysin MMP-like catalytic domain in complex with inhibitory tetrapeptide SWFP
Descriptor: GLYCEROL, Karilysin protease, POTASSIUM ION, ...
Authors:Guevara, T, Ksiazek, M, Skottrup, P.D, Cerda-Costa, N, Trillo-Muyo, S, de Diego, I, Riise, E, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2013-01-04
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the catalytic domain of the Tannerella forsythia matrix metallopeptidase karilysin in complex with a tetrapeptidic inhibitor.
Acta Crystallogr.,Sect.F, 69, 2013
6TUH
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BU of 6tuh by Molmil
The PH domain of Bruton's tyrosine kinase mutant R28C
Descriptor: 4,5,6,7-tetrahydro-1-benzofuran-3-carboxylic acid, MAGNESIUM ION, Tyrosine-protein kinase BTK, ...
Authors:Brear, P, Wagstaff, J, Hyvonen, M.
Deposit date:2020-01-07
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of 1-methylindoline-2,3-dione covalently bound to the PH domain of Bruton's tyrosine kinase mutant R28C
To Be Published
6HYD
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BU of 6hyd by Molmil
Rea1 Wild type ADP state (tail part)
Descriptor: Midasin,Midasin,Midasin
Authors:Sosnowski, P, Urnavicius, L, Boland, A, Fagiewicz, R, Busselez, J, Papai, G, Schmidt, H.
Deposit date:2018-10-19
Release date:2018-12-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The CryoEM structure of the Saccharomyces cerevisiae ribosome maturation factor Rea1.
Elife, 7, 2018
6T8X
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BU of 6t8x by Molmil
Crystal structure of MAPKAPK2 (MK2) complexed with PF-3644022 and 5-(4-bromophenyl)-N-[4-(1-piperazinyl)phenyl]-N-(2-pyridinylmethyl)-2-furancarboxamide
Descriptor: (10R)-10-methyl-3-(6-methylpyridin-3-yl)-9,10,11,12-tetrahydro-8H-[1,4]diazepino[5',6':4,5]thieno[3,2-f]quinolin-8-one, 5-(4-bromophenyl)-~{N}-(4-piperazin-1-ylphenyl)-~{N}-(pyridin-2-ylmethyl)furan-2-carboxamide, CHLORIDE ION, ...
Authors:Beaumont, E.J, Barker, J.
Deposit date:2019-10-25
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structure of MAPKAPK2 (MK2) complexed with PF-3644022 and 5-(4-bromophenyl)-N-[4-(1-piperazinyl)phenyl]-N-(2-pyridinylmethyl)-2-furancarboxamide
To Be Published
3N01
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BU of 3n01 by Molmil
Crystal structure of an abridged form of the mature ectodomain of the Human Receptor-Type Protein Tyrosine Phosphatase ICA512/IA-2 at pH 8.5
Descriptor: CALCIUM ION, Receptor-type tyrosine-protein phosphatase-like N
Authors:Primo, M.E, Jakoncic, J, Poskus, E, Ermacora, M.R.
Deposit date:2010-05-13
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Receptor-type Protein-Tyrosine Phosphatase IA-2-ICA512
To be Published
3N1C
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BU of 3n1c by Molmil
Crystal structure of the phosphofructokinase-2 from Escherichia coli in complex with fructose-6-phosphate
Descriptor: 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructokinase isozyme 2
Authors:Pereira, H.M, Cabrera, R, Caniuguir, A, Garratt, R.C, Babul, J.
Deposit date:2010-05-15
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Complex of Phosphofructokinase-2 of Escherichia coli with Fructose-6-phosphate: KINETIC AND STRUCTURAL ANALYSIS OF THE ALLOSTERIC ATP INHIBITION.
J.Biol.Chem., 286, 2011
6HWM
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BU of 6hwm by Molmil
Structure of Thermus thermophilus ClpP in complex with bortezomib
Descriptor: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE
Authors:Felix, J, Schanda, P, Fraga, H, Morlot, C.
Deposit date:2018-10-12
Release date:2019-09-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
6H0B
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BU of 6h0b by Molmil
Crystal structure of the human GalNAc-T4 in complex with UDP, manganese and the diglycopeptide 6.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, ALA-THR-GLY-ALA-GLY-ALA-GLY-ALA-GLY-THR-THR-PRO-GLY-PRO-GLY, ...
Authors:de las Rivas, M, Daniel, E.J.P, Coelho, H, Lira-Navarrete, E, Raich, L, Companon, I, Diniz, A, Lagartera, L, Jimenez-Barbero, J, Clausen, H, Rovira, C, Marcelo, F, Corzana, F, Gerken, T.A, Hurtado-Guerrero, R.
Deposit date:2018-07-08
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Mechanistic Insights into the Catalytic-Domain-Mediated Short-Range Glycosylation Preferences of GalNAc-T4.
ACS Cent Sci, 4, 2018
6H1C
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BU of 6h1c by Molmil
Structure of Ferric uptake regulator from Pseudomonas aeruginosa with manganese.
Descriptor: Ferric uptake regulation protein, MANGANESE (II) ION, ZINC ION
Authors:Nader, S, Perard, J, Carpentier, P, Michaud-Soret, I, Crouzy, S.
Deposit date:2018-07-11
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Ferric uptake regulator with Mn and Zn form Pseudomonas aeruginosa
To Be Published
6H1M
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BU of 6h1m by Molmil
Neutron structure of Lactobacillus brevis alcohol dehydrogenase
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, R-specific alcohol dehydrogenase
Authors:Hermann, J, Nowotny, P, Schrader, T.E, Biggel, P, Hekmat, D, Weuster-Botz, D.
Deposit date:2018-07-12
Release date:2018-12-12
Last modified:2024-01-24
Method:NEUTRON DIFFRACTION (2.15 Å)
Cite:Neutron and X-ray crystal structures of Lactobacillus brevis alcohol dehydrogenase reveal new insights into hydrogen-bonding pathways.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6GXC
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BU of 6gxc by Molmil
Bacterial oligosaccharyltransferase PglB in complex with an inhibitory peptide and a reactive lipid-linked oligosaccharide analog
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLY-ASP-GLN-DAB-ALA-THR-PPN-GLY, ...
Authors:Napiorkowska, M, Locher, K.P, Boilevin, J, Darbre, T, Reymond, J.-L.
Deposit date:2018-06-27
Release date:2018-11-14
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:Structure of bacterial oligosaccharyltransferase PglB bound to a reactive LLO and an inhibitory peptide.
Sci Rep, 8, 2018
6TEY
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BU of 6tey by Molmil
Solution Structure of the DNA-binding TubR fragment from Clostridium Botulinum
Descriptor: DNA-binding protein TubR
Authors:Valverde, P, Canada, F.J, Jimenez-Barbero, J, Oliva, M.A.
Deposit date:2019-11-12
Release date:2020-11-18
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure of TubR protein fragment from Clostridium Botulinum's phage c-st
To Be Published
6T2G
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BU of 6t2g by Molmil
NMR structure of KRAS32R G25T conformer G-quadruplex within KRAS promoter region
Descriptor: KRAS32R G25T, POTASSIUM ION
Authors:Marquevielle, J, Salgado, G.
Deposit date:2019-10-08
Release date:2020-02-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure of two G-quadruplexes in equilibrium in the KRAS promoter.
Nucleic Acids Res., 48, 2020
6TRM
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BU of 6trm by Molmil
Solution structure of the antifungal protein PAFC
Descriptor: Pc21g12970 protein
Authors:Czajlik, A, Holzknecht, J, Marx, F, Batta, G.
Deposit date:2019-12-19
Release date:2020-10-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure, Dynamics, and New Antifungal Aspects of the Cysteine-Rich Miniprotein PAFC.
Int J Mol Sci, 22, 2021
2EPH
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BU of 2eph by Molmil
Crystal structure of fructose-bisphosphate aldolase from Plasmodium falciparum in complex with TRAP-tail determined at 2.7 angstrom resolution
Descriptor: Fructose-bisphosphate aldolase, PbTRAP
Authors:Bosch, J, Buscaglia, C.A, Krumm, B, Cardozo, T, Nussenzweig, V, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2007-03-30
Release date:2007-04-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Aldolase provides an unusual binding site for thrombospondin-related anonymous protein in the invasion machinery of the malaria parasite.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6TGC
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BU of 6tgc by Molmil
CryoEM structure of the ternary DOCK2-ELMO1-RAC1 complex.
Descriptor: Dedicator of cytokinesis protein 2, Engulfment and cell motility protein 1, Ras-related C3 botulinum toxin substrate 1
Authors:Chang, L, Yang, J, Chang, J.H, Zhang, Z, Boland, A, McLaughlin, S.H, Abu-Thuraia, A, Killoran, R.C, Smith, M.J, Cote, J.F, Barford, D.
Deposit date:2019-11-15
Release date:2020-07-29
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of the DOCK2-ELMO1 complex provides insights into regulation of the auto-inhibited state.
Nat Commun, 11, 2020
1QM4
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BU of 1qm4 by Molmil
Methionine Adenosyltransferase Complexed with a L-Methionine Analogue
Descriptor: L-2-AMINO-4-METHOXY-CIS-BUT-3-ENOIC ACID, MAGNESIUM ION, METHIONINE ADENOSYLTRANSFERASE, ...
Authors:Gonzalez, B, Pajares, M.A, Hermoso, J.A, Sanz-Aparicio, J.
Deposit date:1999-09-20
Release date:2000-09-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The Crystal Structure of Tetrameric Methionine Adenosyltransferase from Rat Liver Reveals the Methionine-Binding Site
J.Mol.Biol., 300, 2000
6H67
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BU of 6h67 by Molmil
Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD)
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Sanz-Murillo, M, Xu, J, Gil-Carton, D, Wang, D, Fernandez-Tornero, C.
Deposit date:2018-07-26
Release date:2018-08-29
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of RNA polymerase I stalling at UV light-induced DNA damage.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6SM1
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BU of 6sm1 by Molmil
Wild type immunoglobulin light chain (WT-1)
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Immunoglobulin lambda variable 2-14, ...
Authors:Kazman, P, Vielberg, M.-T, Cendales, M.D.P, Hunziger, L, Weber, B, Hegenbart, U, Zacharias, M, Koehler, R, Schoenland, S, Groll, M, Buchner, J.
Deposit date:2019-08-21
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Fatal amyloid formation in a patient's antibody light chain is caused by a single point mutation.
Elife, 9, 2020
6SVI
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BU of 6svi by Molmil
Non-terahertz irradiated structure of bovine trypsin (even frames of crystal x42)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Ahlberg Gagner, V, Lundholm, I, Garcia-Bonete, M.J, Rodilla, H, Friedman, R, Zhaunerchyk, V, Bourenkov, G, Schneider, T, Stake, J, Katona, G.
Deposit date:2019-09-18
Release date:2020-01-22
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties.
Sci Rep, 9, 2019
6SVX
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BU of 6svx by Molmil
Reference structure of bovine trypsin (odd frames of crystal x33)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Ahlberg Gagner, V, Lundholm, I, Garcia-Bonete, M.J, Rodilla, H, Friedman, R, Zhaunerchyk, V, Bourenkov, G, Schneider, T, Stake, J, Katona, G.
Deposit date:2019-09-19
Release date:2020-01-22
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties.
Sci Rep, 9, 2019
2EUD
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BU of 2eud by Molmil
Structures of Yeast Ribonucleotide Reductase I complexed with Ligands and Subunit Peptides
Descriptor: GEMCITABINE DIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Dealwis, C, Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J.
Deposit date:2005-10-28
Release date:2006-03-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of eukaryotic ribonucleotide reductase I define gemcitabine diphosphate binding and subunit assembly.
Proc.Natl.Acad.Sci.Usa, 103, 2006

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