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PDB: 42745 results

1USZ
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BU of 1usz by Molmil
SeMet AfaE-3 adhesin from Escherichia Coli
Descriptor: AFIMBRIAL ADHESIN AFA-III, CHLORIDE ION, SULFATE ION
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-12-02
Release date:2004-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
7L9I
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BU of 7l9i by Molmil
Crystal structure of human ARH3-D314A bound to magnesium and ADP-ribose
Descriptor: ADP-ribose glycohydrolase ARH3, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
Deposit date:2021-01-04
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
3SQV
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BU of 3sqv by Molmil
Crystal Structure of E. coli O157:H7 E3 ubiquitin ligase, NleL, with a human E2, UbcH7
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin-conjugating enzyme E2 L3, ...
Authors:Lin, D.Y, Chen, J.
Deposit date:2011-07-06
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structures of two bacterial HECT-like E3 ligases in complex with a human E2 reveal atomic details of pathogen-host interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
5CIY
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BU of 5ciy by Molmil
Structural basis of the recognition of H3K36me3 by DNMT3B PWWP domain
Descriptor: DNA (5'-D(P*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*(3DR)P*GP*CP*AP*TP*GP*G)-3'), Modification methylase HhaI, ...
Authors:Rondelet, G, DAL MASO, T, Willems, L, Wouters, J.
Deposit date:2015-07-13
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B.
J.Struct.Biol., 194, 2016
7LT9
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BU of 7lt9 by Molmil
Crystal structure of Ras suppressor-1 in complex with PINCH-1 LIM4-5 domains
Descriptor: LIM and senescent cell antigen-like-containing domain protein 1, Ras suppressor protein 1, ZINC ION
Authors:Fukuda, K, Qin, J.
Deposit date:2021-02-19
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.050112 Å)
Cite:Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly.
J.Biol.Chem., 296, 2021
7L9F
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BU of 7l9f by Molmil
Crystal structure of human ARH3 bound to calcium and ADP-ribose
Descriptor: CALCIUM ION, Poly(ADP-ribose) glycohydrolase ARH3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
Deposit date:2021-01-04
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
7LT8
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BU of 7lt8 by Molmil
Crystal structure of Ras suppressor-1
Descriptor: Ras suppressor protein 1
Authors:Fukuda, K, Qin, J.
Deposit date:2021-02-19
Release date:2021-04-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.76000249 Å)
Cite:Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly.
J.Biol.Chem., 296, 2021
7L9H
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BU of 7l9h by Molmil
Crystal structure of human ARH3-D77A bound to magnesium and ADP-ribose
Descriptor: ADP-ribose glycohydrolase ARH3, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
Deposit date:2021-01-04
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
5CM4
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BU of 5cm4 by Molmil
Crystal structure of human Frizzled 4 Cysteine-Rich Domain (CRD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Frizzled-4
Authors:Ke, J, Parker, N, Gu, X, Zhang, C, Melcher, K, Xu, H.E.
Deposit date:2015-07-16
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of the Norrin-Frizzled 4 interaction.
Cell Res., 25, 2015
5CML
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BU of 5cml by Molmil
Crystal structure of the Esterase domain from Rhodothermus marinus Rmar_1206 protein
Descriptor: OsmC family protein, TRIETHYLENE GLYCOL
Authors:Marles-Wright, J, Wardrope, C, Jensen, M.-B.V, Horsfall, L.E, Togneri, P.D, Rosser, S.J.
Deposit date:2015-07-16
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Characterisation of a New Family of Carboxyl Esterases with an OsmC Domain.
Plos One, 11, 2016
5BYS
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BU of 5bys by Molmil
Semisynthetic [FeFe]-hydrogenase CpI with sulfur-dithiolato-bridged [2Fe] cofactor
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Esselborn, J, Muraki, N, Engelbrecht, V, Hofmann, E, Kurisu, G, Happe, T.
Deposit date:2015-06-10
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:A structural view of synthetic cofactor integration into [FeFe]-hydrogenases.
Chem Sci, 7, 2016
1YRA
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BU of 1yra by Molmil
PAB0955 crystal structure : a GTPase in GDP bound form from Pyrococcus abyssi
Descriptor: ATP(GTP)binding protein, GUANOSINE-5'-DIPHOSPHATE
Authors:Gras, S, Carpentier, P, Armengaud, J, Housset, D.
Deposit date:2005-02-03
Release date:2006-02-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into a new homodimeric self-activated GTPase family.
Embo Rep., 8, 2007
2IFV
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BU of 2ifv by Molmil
Crystal structure of an active site mutant, C473D, of CDC25B phosphatase catalytic domain
Descriptor: CHLORIDE ION, M-phase inducer phosphatase 2
Authors:Rudolph, J, Buhrman, G.
Deposit date:2006-09-21
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Kinetic and structural studies of specific protein-protein interactions in substrate catalysis by Cdc25B phosphatase.
Biochemistry, 46, 2007
4PVP
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BU of 4pvp by Molmil
Crystal structure of malonate-bound human L-asparaginase protein
Descriptor: Isoaspartyl peptidase/L-asparaginase, MALONATE ION, SODIUM ION
Authors:Nomme, J, Lavie, A.
Deposit date:2014-03-18
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
4QJH
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BU of 4qjh by Molmil
Crystal Structure of the Twister Ribozyme with the Nucleotide 5'- to the Cleavage Site Ordered at 4.1 A Resolution
Descriptor: MAGNESIUM ION, Twister Ribozyme
Authors:Eiler, D.R, Wang, J, Steitz, T.A.
Deposit date:2014-06-03
Release date:2014-09-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.88 Å)
Cite:Structural basis for the fast self-cleavage reaction catalyzed by the twister ribozyme.
Proc.Natl.Acad.Sci.USA, 111, 2014
7LIG
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BU of 7lig by Molmil
The structure of the insect olfactory receptor OR5 from Machilis hrabei in complex with DEET
Descriptor: MhOR5, N,N-diethyl-3-methylbenzamide
Authors:del Marmol, J, Ruta, V.
Deposit date:2021-01-27
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The structural basis of odorant recognition in insect olfactory receptors.
Nature, 597, 2021
1QN0
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BU of 1qn0 by Molmil
SOLUTION STRUCTURE OF DESULFOVIBRIO GIGAS FERROCYTOCHROME C3, NMR, 20 STRUCTURES
Descriptor: CYTOCHROME C3, HEME C
Authors:Messias, A.C, Teodoro, M.L, Brennan, L, Legall, J, Santos, H, Xavier, A.V, Turner, D.L.
Deposit date:1999-10-11
Release date:2000-10-12
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Structural Basis for the Network of Functional Cooperativities in Cytochrome C3 from Desulfovibrio Gigas: Solution Structures of the Oxidised and Reduced States
J.Mol.Biol., 298, 2000
4PYI
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BU of 4pyi by Molmil
human apo COMT
Descriptor: Catechol O-methyltransferase, SODIUM ION
Authors:Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
Deposit date:2014-03-27
Release date:2014-06-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
7LHH
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BU of 7lhh by Molmil
Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapG in the second conformation
Descriptor: Chaperone protein PapD, Fimbrial adapter PapK, P fimbria tip G-adhesin PapG-II, ...
Authors:Du, M, Yuan, Z, Werneburg, G, Henderson, N, Chauhan, H, Kovach, A, Zhao, G, Johl, J, Li, H, Thanassi, D.
Deposit date:2021-01-23
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Processive dynamics of the usher assembly platform during uropathogenic Escherichia coli P pilus biogenesis.
Nat Commun, 12, 2021
4PYZ
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BU of 4pyz by Molmil
Crystal structure of the first two Ubl domains of Deubiquitylase USP7
Descriptor: UNKNOWN ATOM OR ION, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Walker, J.R, Dong, A, Ong, M.S, Dhe-Paganon, S, Kania, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2014-03-28
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Crystal structure of the first two Ubl domains of Deubiquitylase USP7
to be published
7LIC
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BU of 7lic by Molmil
The structure of the insect olfactory receptor OR5 from Machilis hrabei
Descriptor: MhOR5
Authors:del Marmol, J, Ruta, V.
Deposit date:2021-01-26
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structural basis of odorant recognition in insect olfactory receptors.
Nature, 597, 2021
4PZN
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BU of 4pzn by Molmil
Crystal structure of PHC3 SAM L971E
Descriptor: 1,2-ETHANEDIOL, Polyhomeotic-like protein 3
Authors:Nanyes, D.R, Junco, S.E, Taylor, A.B, Robinson, A.K, Patterson, N.L, Shivarajpur, A, Halloran, J, Hale, S.M, Kaur, Y, Hart, P.J, Kim, C.A.
Deposit date:2014-03-31
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multiple polymer architectures of human polyhomeotic homolog 3 sterile alpha motif.
Proteins, 82, 2014
3T72
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BU of 3t72 by Molmil
PhoB(E)-Sigma70(4)-(RNAP-Betha-flap-tip-helix)-DNA Transcription Activation Sub-Complex
Descriptor: PHO BOX DNA (STRAND 1), PHO BOX DNA (STRAND 2), Phosphate regulon transcriptional regulatory protein phoB, ...
Authors:Blanco, A.G, Canals, A, Bernues, J, Sola, M, Coll, M.
Deposit date:2011-07-29
Release date:2011-09-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.33 Å)
Cite:The structure of a transcription activation subcomplex reveals how sigma (70) is recruited to PhoB promoters.
Embo J., 30, 2011
7LID
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BU of 7lid by Molmil
The structure of the insect olfactory receptor OR5 from Machilis hrabei in complex with eugenol
Descriptor: 2-methoxy-4-(prop-2-en-1-yl)phenol, MhOR5
Authors:del Marmol, J, Ruta, V.
Deposit date:2021-01-27
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The structural basis of odorant recognition in insect olfactory receptors.
Nature, 597, 2021
7LHI
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BU of 7lhi by Molmil
Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapF-PapG
Descriptor: Chaperone protein PapD, Fimbrial adapter PapK, Fimbrial protein, ...
Authors:Du, M, Yuan, Z, Werneburg, G, Henderson, N, Chauhan, H, Kovach, A, Zhao, G, Johl, J, Li, H, Thanassi, D.
Deposit date:2021-01-23
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Processive dynamics of the usher assembly platform during uropathogenic Escherichia coli P pilus biogenesis.
Nat Commun, 12, 2021

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