Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42745 results

5JWD
DownloadVisualize
BU of 5jwd by Molmil
Crystal structure of H-2Db in complex with the LCMV-derived GP392-401 peptide
Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
Authors:Buratto, J, Badia-Martinez, D, Norstrom, M, Sandalova, T, Achour, A.
Deposit date:2016-05-12
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of H-2Db in complex with the LCMV-derived peptides GP92 and GP392 explain pleiotropic effects of glycosylation on antigen presentation and immunogenicity.
PLoS ONE, 12, 2017
8VLX
DownloadVisualize
BU of 8vlx by Molmil
HTT in complex with HAP40 and a small molecule.
Descriptor: 40-kDa huntingtin-associated protein, Huntingtin, N-[(1S,2R)-2-benzylcyclopentyl]-N'-{1-[(1S)-1-(pyridin-4-yl)ethyl]piperidin-4-yl}urea
Authors:Poweleit, N, Boudet, J, Doherty, E.
Deposit date:2024-01-12
Release date:2024-03-06
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Discovery of a Small Molecule Ligand to the Huntingtin/HAP40 complex
To Be Published
8UUG
DownloadVisualize
BU of 8uug by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12303
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-01
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8DSG
DownloadVisualize
BU of 8dsg by Molmil
P411-PFA carbene transferase
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cytochrome P450-BM3 variant P411-PFA, ...
Authors:Maggiolo, A.O, Porter, N.J, Zhang, J, Arnold, F.H.
Deposit date:2022-07-22
Release date:2023-03-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Chemodivergent C(sp 3 )-H and C(sp 2 )-H Cyanomethylation Using Engineered Carbene Transferases.
Nat Catal, 6, 2023
1QLR
DownloadVisualize
BU of 1qlr by Molmil
CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF A HUMAN MONOCLONAL IgM COLD AGGLUTININ
Descriptor: IGM FAB REGION IV-J(H4)-C (KAU COLD AGGLUTININ), IGM KAPPA CHAIN V-III (KAU COLD AGGLUTININ), alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Carvalho, J.G, Cauerhff, A, Goldbaum, F, Leoni, J, Polikarpov, I.
Deposit date:1999-09-11
Release date:2000-09-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Three-dimensional structure of the Fab from a human IgM cold agglutinin.
J Immunol., 165, 2000
5K2N
DownloadVisualize
BU of 5k2n by Molmil
lysozyme with nano particles
Descriptor: Lysozyme C
Authors:Ko, S, Choe, J.
Deposit date:2016-05-19
Release date:2017-05-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Lysozyme
To Be Published
8UP3
DownloadVisualize
BU of 8up3 by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant Y21F)
Descriptor: 1,2-ETHANEDIOL, ASPARTIC ACID, Asparaginase, ...
Authors:Lubkowski, J, Wlodawer, A, Zhang, D.
Deposit date:2023-10-20
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UPC
DownloadVisualize
BU of 8upc by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K158M)
Descriptor: Asparaginase, CHLORIDE ION, GLYCEROL
Authors:Lubkowski, J, Wlodawer, A, Zhang, D.
Deposit date:2023-10-22
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8ED0
DownloadVisualize
BU of 8ed0 by Molmil
Cryo-EM Structure of the P74-26 Tail Tube
Descriptor: Tail Tube Protein gp93
Authors:Agnello, E, Pajak, J, Liu, X, Kelch, B.
Deposit date:2022-09-02
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Conformational dynamics control assembly of an extremely long bacteriophage tail tube.
J.Biol.Chem., 299, 2023
5K6E
DownloadVisualize
BU of 5k6e by Molmil
Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with SBI0654919
Descriptor: 2-chloranyl-6-fluoranyl-~{N}-[(2~{R})-4-(4-fluorophenyl)sulfonyl-2-(hydroxymethyl)-2,3-dihydro-1,4-benzoxazin-6-yl]benzamide, Nuclear receptor ROR-gamma
Authors:Lu, J, Rastinejad, F.
Deposit date:2016-05-24
Release date:2017-05-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with SBI0654919
To be published
3ME3
DownloadVisualize
BU of 3me3 by Molmil
Activator-Bound Structure of Human Pyruvate Kinase M2
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 3-{[4-(2,3-dihydro-1,4-benzodioxin-6-ylsulfonyl)-1,4-diazepan-1-yl]sulfonyl}aniline, Pyruvate kinase isozymes M1/M2, ...
Authors:Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-03-31
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Pyruvate kinase M2 activators promote tetramer formation and suppress tumorigenesis.
Nat.Chem.Biol., 8, 2012
8UUY
DownloadVisualize
BU of 8uuy by Molmil
SARS-CoV-2 papain-like protease (PLpro) complex with inhibitor Jun12129
Descriptor: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-02
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UP6
DownloadVisualize
BU of 8up6 by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K19A) in complex with L-Asp
Descriptor: ASPARTIC ACID, Asparaginase, TETRAETHYLENE GLYCOL
Authors:Lubkowski, J, Wlodawer, A, Zhang, D.
Deposit date:2023-10-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8E3N
DownloadVisualize
BU of 8e3n by Molmil
Crystal structure of pregnane X receptor ligand binding domain complexed with rifamycin S
Descriptor: Nuclear receptor subfamily 1 group I member 2, Rifamycin S
Authors:Huber, A.D, Poudel, S, Seetharaman, J, Miller, D.J, Lin, W, Chen, T.
Deposit date:2022-08-17
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-guided approach to modulate small molecule binding to a promiscuous ligand-activated protein.
Proc.Natl.Acad.Sci.USA, 120, 2023
8UUU
DownloadVisualize
BU of 8uuu by Molmil
SARS-Cov-2 papain-like protease (PLpro) with inhibitor Jun12162
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-02
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
7UCS
DownloadVisualize
BU of 7ucs by Molmil
The Crystal Structure of Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57:H:H:H:R58 Mutant of hCRBPII with Histidine Insertion in the Hinge Loop Region at 1.92 Angstrom Resolution
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2022-03-17
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
To Be Published
7UCT
DownloadVisualize
BU of 7uct by Molmil
The Crystal Structure of Apo Domain-Swapped Dimer F57:H:H:H:H:H:H:R58 Mutant of HCRBPII with Histidine Insertion in the Hinge Loop Region at 2.5 Angstrom Resolution
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2022-03-17
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
To Be Published
7UD3
DownloadVisualize
BU of 7ud3 by Molmil
The Crystal Structure of Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57:W:W:W:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 2.36 Angstrom Resolution
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2022-03-17
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
To Be Published
8JRL
DownloadVisualize
BU of 8jrl by Molmil
Crystal structure of P450 TleB with an indole alkaloid
Descriptor: (2~{S})-~{N}-[(2~{S})-1-(4-fluoranyl-1~{H}-indol-3-yl)-3-oxidanyl-propan-2-yl]-3-methyl-2-sulfanyl-butanamide, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Wang, J, Yan, W.P.
Deposit date:2023-06-17
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Regulation of P450 TleB catalytic flow for the synthesis of sulfur-containing indole alkaloids by substrate structure-directed strategy. and protein engineering.
Sci China Chem, 66, 2023
8UUH
DownloadVisualize
BU of 8uuh by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12199
Descriptor: 5-[2-(dimethylamino)ethoxy]-2-methyl-N-[(1R)-1-{(3M,5P)-3-(1-methyl-1H-pyrazol-4-yl)-5-[1-(propan-2-yl)-1H-pyrazol-4-yl]phenyl}ethyl]benzamide, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-01
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
7UD1
DownloadVisualize
BU of 7ud1 by Molmil
The Crystal Structure of Apo Monomer F57:H:H:H:R58 HCRBPII with Histidine Insertion in the Hinge Loop Region at 1.3 Angstrom Resolution
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2022-03-17
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:The Crystal Structure of Apo Monomer F57:H:H:H:R58 HCRBPII with Histidine Insertion in the Hinge Loop Region at 1.3 Angstrom Resolution
To Be Published
8DVN
DownloadVisualize
BU of 8dvn by Molmil
Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N.
Deposit date:2022-07-29
Release date:2023-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering.
Acs Chem.Biol., 18, 2023
7UCV
DownloadVisualize
BU of 7ucv by Molmil
The Crystal Structure of Apo Domain-Swapped Dimer Q108K:T51D:A28CL36C R58:H:H:H:N59 HCRBPII with Histidine Insertion in the Hinge Loop Region at 2.19 Angstrom Resolution
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2022-03-17
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
To Be Published
7UCZ
DownloadVisualize
BU of 7ucz by Molmil
The Crystal Structure of Apo Monomer F57:H:H:H:H:H:H:R58 Mutant of HCRBPII with Histidine Insertion in the Hinge Loop Region at 1.1 Angstrom Resolution
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2022-03-17
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
To Be Published
7UCN
DownloadVisualize
BU of 7ucn by Molmil
The Crystal Structure of Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
Descriptor: Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2022-03-16
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
To Be Published

225399

건을2024-09-25부터공개중

PDB statisticsPDBj update infoContact PDBjnumon