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PDB: 42745 件

1QU6
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STRUCTURE OF THE DOUBLE-STRANDED RNA-BINDING DOMAIN OF THE PROTEIN KINASE PKR REVEALS THE MOLECULAR BASIS OF ITS DSRNA-MEDIATED ACTIVATION
分子名称: PROTEIN KINASE PKR
著者Nanduri, S, Carpick, B.W, Yang, Y, Williams, B.R.G, Qin, J.
登録日1999-07-08
公開日1999-12-23
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the double-stranded RNA-binding domain of the protein kinase PKR reveals the molecular basis of its dsRNA-mediated activation.
EMBO J., 17, 1998
6UKL
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Crystal Structure of a DiB2-split Protein
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Outer membrane lipoprotein Blc, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Bozhanova, N.G, Meiler, J.
登録日2019-10-05
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献DiB-splits: nature-guided design of a novel fluorescent labeling split system.
Sci Rep, 10, 2020
6TWF
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Human CD73 (ecto 5'-nucleotidase) in complex with PSB12604 (an AOPCP derivative, compound 21 in publication) in the closed state
分子名称: 5'-nucleotidase, CALCIUM ION, ZINC ION, ...
著者Pippel, J, Strater, N.
登録日2020-01-13
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6TWV
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Crystal structure of the haemagglutinin mutant (Gln226Leu) from an H10N7 seal influenza virus isolated in Germany with human receptor analogue, 6'SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Hemagglutinin HA1, ...
著者Zhang, J, Xiong, X, Purkiss, A, Walker, P, Gamblin, S, Skehel, J.J.
登録日2020-01-13
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
Cell Host Microbe, 28, 2020
6HWH
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Structure of a functional obligate respiratory supercomplex from Mycobacterium smegmatis
分子名称: CARDIOLIPIN, COPPER (II) ION, Co-purified unknown peptide built as polyALA, ...
著者Wiseman, B, Nitharwal, R.G, Fedotovskaya, O, Schafer, J, Guo, H, Kuang, Q, Benlekbir, S, Sjostrand, D, Adelroth, P, Rubinstein, J.L, Brzezinski, P, Hogbom, M.
登録日2018-10-12
公開日2018-11-07
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of a functional obligate complex III2IV2respiratory supercomplex from Mycobacterium smegmatis.
Nat. Struct. Mol. Biol., 25, 2018
6ULC
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Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab at a nominal resolution of 4.6 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pan, J, Chen, B, Harrison, S.C.
登録日2019-10-07
公開日2020-04-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Cryo-EM Structure of Full-length HIV-1 Env Bound With the Fab of Antibody PG16.
J.Mol.Biol., 432, 2020
6HYY
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Human phosphoserine phosphatase with serine and phosphate
分子名称: CALCIUM ION, MAGNESIUM ION, PHOSPHATE ION, ...
著者Wouters, J, Haufroid, M, Mirgaux, M.
登録日2018-10-22
公開日2019-06-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.566 Å)
主引用文献Crystal structures and snapshots along the reaction pathway of human phosphoserine phosphatase.
Acta Crystallogr D Struct Biol, 75, 2019
6TVF
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Crystal structure of the haemagglutinin from a H10N7 seal influenza virus isolated in Germany in complex with human receptor analogue, 6'-SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Zhang, J, Xiong, X, Purkiss, A, Walker, P, Gamblin, S, Skehel, J.J.
登録日2020-01-09
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
Cell Host Microbe, 28, 2020
6HAI
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AlbAM131A mutant in complex with albicidin , albicidin resistance protein
分子名称: 4-[[4-[[4-[(3~{S})-3-[[4-[[(~{E})-3-(4-hydroxyphenyl)-2-methyl-prop-2-enoyl]amino]phenyl]carbonylamino]-2,5-bis(oxidanylidene)pyrrolidin-1-yl]phenyl]carbonylamino]-3-methoxy-2-oxidanyl-phenyl]carbonylamino]-3-methoxy-2-oxidanyl-benzoic acid, Albicidin resistance protein, SULFATE ION
著者Koehnke, J, Sikandar, A.
登録日2018-08-07
公開日2018-11-21
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Adaptation of a Bacterial Multidrug Resistance System Revealed by the Structure and Function of AlbA.
J.Am.Chem.Soc., 140, 2018
6TVX
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Human CD73 (ecto 5'-nucleotidase) in complex with PSB12676 (an AOPCP derivative, compound 9 in paper) in the closed state
分子名称: 5'-nucleotidase, ZINC ION, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid
著者Pippel, J, Strater, N.
登録日2020-01-10
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6TWH
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Crystal structure of the haemagglutinin mutant (Gln226Leu, Gly228Ser) from an H10N7 seal influenza virus isolated in Germany
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Zhang, J, Xiong, X, Purkiss, A, Walker, P, Gamblin, S, Skehel, J.J.
登録日2020-01-13
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
Cell Host Microbe, 28, 2020
6HBU
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Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family G member 2, MAGNESIUM ION
著者Manolaridis, I, Jackson, S.M, Taylor, N.M.I, Kowal, J, Stahlberg, H, Locher, K.P.
登録日2018-08-13
公開日2018-11-07
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Cryo-EM structures of a human ABCG2 mutant trapped in ATP-bound and substrate-bound states.
Nature, 563, 2018
6HCO
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Cryo-EM structure of the ABCG2 E211Q mutant bound to estrone 3-sulfate and 5D3-Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3-Fab heavy chain, 5D3-Fab light chain, ...
著者Manolaridis, I, Jackson, S.M, Taylor, N.M.I, Kowal, J, Stahlberg, H, Locher, K.P.
登録日2018-08-15
公開日2018-11-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Cryo-EM structures of a human ABCG2 mutant trapped in ATP-bound and substrate-bound states.
Nature, 563, 2018
6HA8
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Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Crowe-McAuliffe, C, Graf, M, Huter, P, Abdelshahid, M, Novacek, J, Wilson, D.N.
登録日2018-08-07
公開日2018-08-29
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for antibiotic resistance mediated by theBacillus subtilisABCF ATPase VmlR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HXX
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Potato virus Y
分子名称: Coat protein, RNA (5'-R(P*UP*UP*UP*UP*U)-3')
著者Podobnik, M, Kezar, A, Novacek, J, Polak, M.
登録日2018-10-18
公開日2019-08-07
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for the multitasking nature of the potato virus Y coat protein.
Sci Adv, 5, 2019
2DXS
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Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor
分子名称: Genome polyprotein, N-[(13-CYCLOHEXYL-6,7-DIHYDROINDOLO[1,2-D][1,4]BENZOXAZEPIN-10-YL)CARBONYL]-2-METHYL-L-ALANINE
著者Adachi, T, Tsuruha, J, Doi, S, Murase, K, Ikegashira, K, Watanabe, S, Uehara, K, Orita, T, Nomura, A, Kamada, M.
登録日2006-08-30
公開日2006-12-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of Conformationally Constrained Tetracyclic Compounds as Potent Hepatitis C Virus NS5B RNA Polymerase Inhibitors
J.Med.Chem., 49, 2006
6TWS
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Crystal structure of the haemagglutinin mutant (Gln226Leu, Gly228Ser) from an H10N7 seal influenza virus isolated in Germany with 2mM EDTA
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, J, Xiong, X, Purkiss, A, Walker, P, Gamblin, S, Skehel, J.J.
登録日2020-01-13
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
Cell Host Microbe, 28, 2020
4IIE
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Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with calystegine B(2)
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
登録日2012-12-20
公開日2013-04-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
6TYQ
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Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans
分子名称: 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Pertussis-like toxin subunit B
著者Nguyen, T, Milano, S.K, Yang, Y.A, Song, J.
登録日2019-08-09
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The role of 9-O-acetylated glycan receptor moieties in the typhoid toxin binding and intoxication.
Plos Pathog., 16, 2020
7YDX
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Crystal structure of human RIPK1 kinase domain in complex with compound RI-962
分子名称: 1-methyl-5-[2-(2-methylpropanoylamino)-[1,2,4]triazolo[1,5-a]pyridin-7-yl]-N-[(1S)-1-phenylethyl]indole-3-carboxamide, IODIDE ION, Receptor-interacting serine/threonine-protein kinase 1
著者Zhang, L, Wang, Y, Li, Y, Wu, C, Luo, X, Wang, T, Lei, J, Yang, S.
登録日2022-07-04
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Generative deep learning enables the discovery of a potent and selective RIPK1 inhibitor.
Nat Commun, 13, 2022
4IMB
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Structure of strictosidine synthase in complex with 2-(1-methyl-1H-indol-3-yl)ethanamine
分子名称: 2-(1-methyl-1H-indol-3-yl)ethanamine, Strictosidine synthase
著者Stoeckigt, J, Fangrui, W, Wang, M, Rajendran, C.
登録日2013-01-02
公開日2014-01-29
最終更新日2016-08-03
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Using Strictosidine Synthase to Prepare Novel Alkaloids.
Curr.Med.Chem., 2015
1B1G
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SOLVATED REFINEMENT OF CA-LOADED CALBINDIN D9K
分子名称: CALCIUM ION, PROTEIN (CALBINDIN D9K)
著者Kordel, J, Pearlman, D.A, Chazin, W.J.
登録日1998-11-20
公開日1998-11-25
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Protein solution structure calculations in solution: solvated molecular dynamics refinement of calbindin D9k.
J.Biomol.NMR, 10, 1997
6HBJ
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Echovirus 18 empty particle
分子名称: Viral protein 1, Viral protein 2, Viral protein 3
著者Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
登録日2018-08-10
公開日2019-03-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
1QF9
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PH INFLUENCES FLUORIDE COORDINATION NUMBER OF THE ALFX PHOSPHORYL TRANSFER TRANSITION STATE ANALOG IN UMP/CMP KINASE
分子名称: ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
著者Schlichting, I, Reinstein, J.
登録日1999-04-07
公開日1999-08-16
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献pH influences fluoride coordination number of the AlFx phosphoryl transfer transition state analog.
Nat.Struct.Biol., 6, 1999
4IPN
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The complex structure of 6-phospho-beta-glucosidase BglA-2 with thiocellobiose-6P from Streptococcus pneumoniae
分子名称: 6-O-phosphono-alpha-L-idopyranose-(1-4)-4-thio-beta-D-glucopyranose, 6-phospho-beta-glucosidase
著者Yu, W.L, Jiang, Y.L, Andreas, P, Cheng, W, Bai, X.H, Ren, Y.M, Thompsonn, J, Zhou, C.Z, Chen, Y.X.
登録日2013-01-10
公開日2013-04-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.411 Å)
主引用文献Structural insights into the substrate specificity of a 6-phospho-&[beta]-glucosidase BglA-2 from Streptococcus pneumoniae TIGR4
J.Biol.Chem., 288, 2013

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