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PDB: 42745 件

1PN8
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BU of 1pn8 by Molmil
Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately fitted into the Cryo-EM map of E.coli 70S.EF-G.GDPNP complex. The atomic coordinates originally from the E-site tRNA were fitted in the position of the hybrid P/E-site tRNA.
分子名称: 30S ribosomal protein S12, 50S ribosomal protein L11, E-tRNA
著者Valle, M, Zavialov, A, Sengupta, J, Rawat, U, Ehrenberg, M, Frank, J.
登録日2003-06-12
公開日2003-07-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献Locking and Unlocking of Ribosomal Motions
Cell(Cambridge,Mass.), 114, 2003
4PWZ
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Crystal structure of TolB protein from Yersinia pestis CO92
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Maltseva, N, Kim, Y, Osipiuk, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-03-21
公開日2014-04-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.732 Å)
主引用文献Crystal structure of TolB protein from Yersinia pestis CO92
To be Published
2IZ1
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6PDH complexed with PEX inhibitor synchrotron data
分子名称: 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID, ...
著者Sundaramoorthy, R, Iulek, J, Hunter, W.N.
登録日2006-07-23
公開日2007-01-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of a Bacterial 6- Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates.
FEBS J., 274, 2007
2IZ0
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BU of 2iz0 by Molmil
PEX inhibitor-home data
分子名称: 1,2-ETHANEDIOL, 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
著者Sundaramoorthy, R, Iulek, J, Hunter, W.N.
登録日2006-07-23
公開日2007-01-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of a Bacterial 6- Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates.
FEBS J., 274, 2007
4PYQ
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Humanized rat apo-COMT in complex with a ureido-benzamidine
分子名称: 4-({[3-(aminomethyl)phenyl]carbamoyl}amino)benzenecarboximidamide, ACETATE ION, CHLORIDE ION, ...
著者Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
登録日2014-03-27
公開日2014-06-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
4PVR
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BU of 4pvr by Molmil
Crystal structure of partially-cleaved human l-asparaginase protein in complex with l-aspartate
分子名称: ASPARTIC ACID, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
著者Nomme, J, Lavie, A.
登録日2014-03-18
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
5B60
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Crystal structure of PtLCIB4 S47R mutant, a homolog of the limiting CO2-inducible protein LCIB
分子名称: CHLORIDE ION, PtLCIB4 S47R mutant, ZINC ION
著者Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Caja, O.M, Gao, Y.
登録日2016-05-24
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
4PZT
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Crystal structure of p300 histone acetyltransferase domain in complex with an inhibitor, Acetonyl-Coenzyme A
分子名称: DIMETHYL SULFOXIDE, Histone acetyltransferase p300, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-2,2-DIMETHYL-4-OXO-4-{[3-OXO-3-({2-[(2-OXOPROPYL)THIO]ETHYL}AMINO)PROPYL]AMINO}BUTYL DIHYDROGEN DIPHOSPHATE
著者Maksimoska, J, Marmorstein, R.
登録日2014-03-31
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the p300 Histone Acetyltransferase Bound to Acetyl-Coenzyme A and Its Analogues.
Biochemistry, 53, 2014
4Q02
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Second-site screening of K-Ras in the presence of covalently attached first-site ligands
分子名称: 3,4-difluorobenzenethiol, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
著者Sun, Q, Phan, J, Friberg, A, Camper, D.V, Olejniczak, E.T, Fesik, S.W.
登録日2014-03-31
公開日2014-09-10
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.
J.Biomol.Nmr, 60, 2014
7KRI
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BU of 7kri by Molmil
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase
分子名称: 1,3-dimethyl-1H-pyrrolo[3,4-d]pyrimidine-2,4(3H,6H)-dione, MALONATE ION, Non-structural protein 9, ...
著者Littler, D.R, Gully, B.S, Rossjohn, J.
登録日2020-11-20
公開日2021-07-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Binding of a pyrimidine RNA base-mimic to SARS-CoV-2 nonstructural protein 9.
J.Biol.Chem., 297, 2021
4PXT
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BU of 4pxt by Molmil
Structural basis for the assembly of the mitotic motor kinesin-5 into bipolar tetramers
分子名称: Bipolar kinesin KRP-130
著者Scholey, J.E, Nithianantham, S, Scholey, J.M, Al-Bassam, J.
登録日2014-03-25
公開日2014-04-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for the assembly of the mitotic motor Kinesin-5 into bipolar tetramers.
Elife, 3, 2014
2J6C
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BU of 2j6c by Molmil
crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses
分子名称: AFV3-109, GLYCEROL
著者Keller, J, Leulliot, N, Cambillau, C, Campanacci, V, Porciero, S, Prangishvili, D, Cortez, D, Quevillon-Cheruel, S, Van Tilbeurgh, H.
登録日2006-09-27
公開日2007-02-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Afv3-109, a Highly Conserved Protein from Crenarchaeal Viruses.
Virol J., 4, 2007
4PY0
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BU of 4py0 by Molmil
Crystal structure of P2Y12 receptor in complex with 2MeSATP
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate), P2Y purinoceptor 12, ...
著者Zhang, J, Zhang, K, Gao, Z.G, Paoletta, S, Zhang, D, Han, G.W, Li, T, Ma, L, Zhang, W, Muller, C.E, Yang, H, Jiang, H, Cherezov, V, Katritch, V, Jacobson, K.A, Stevens, R.C, Wu, B, Zhao, Q, GPCR Network (GPCR)
登録日2014-03-25
公開日2014-04-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Agonist-bound structure of the human P2Y12 receptor
Nature, 509, 2014
4PYJ
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BU of 4pyj by Molmil
human apo-COMT, single domain swap
分子名称: CHLORIDE ION, Catechol O-methyltransferase, MAGNESIUM ION, ...
著者Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
登録日2014-03-27
公開日2014-06-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
4PYO
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BU of 4pyo by Molmil
Humanized rat COMT bound to SAH, semi-holo form
分子名称: Catechol O-methyltransferase, MAGNESIUM ION, POTASSIUM ION, ...
著者Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
登録日2014-03-27
公開日2014-06-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
5BOD
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BU of 5bod by Molmil
Crystal structure of Streptococcus pneumonia ParE inhibitor
分子名称: (2R)-N-[3-(3,5-dimethylphenyl)-1H-pyrazol-5-yl]-1,4-dioxane-2-carboxamide, DNA topoisomerase 4 subunit B
著者Tan, Y.W, Chen, G, Hung, A.W, Hill, J.
登録日2015-05-27
公開日2015-06-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Application of Fragment-based Drug Discovery against DNA GyraseB
to be published
4Q58
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Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex
分子名称: Integrin beta-4, Plectin
著者Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
登録日2014-04-16
公開日2014-07-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.001 Å)
主引用文献Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex
To be Published
1XHX
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BU of 1xhx by Molmil
Phi29 DNA Polymerase, orthorhombic crystal form
分子名称: DNA polymerase, MAGNESIUM ION, SULFATE ION
著者Kamtekar, S, Berman, A.J, Wang, J, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
登録日2004-09-21
公開日2004-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Insights into Strand Displacement and Processivity from the Crystal Structure of the Protein-Primed DNA Polymerase of Bacteriophage phi29
Mol.Cell, 16, 2004
4Q5V
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BU of 4q5v by Molmil
Crystal structure of the catalytic core of human DNA polymerase alpha in ternary complex with an RNA-primed DNA template and aphidicolin
分子名称: (3R,4R,4aR,6aS,8R,9R,11aS,11bS)-4,9-bis(hydroxymethyl)-4,11b-dimethyltetradecahydro-8,11a-methanocyclohepta[a]naphthale ne-3,9-diol, DNA polymerase alpha catalytic subunit, DNA template, ...
著者Baranovskiy, A.G, Babayeva, N.D, Suwa, Y, Gu, J, Tahirov, T.H.
登録日2014-04-17
公開日2014-11-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural basis for inhibition of DNA replication by aphidicolin.
Nucleic Acids Res., 42, 2014
3RGO
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BU of 3rgo by Molmil
Crystal Structure of PTPMT1
分子名称: Protein-tyrosine phosphatase mitochondrial 1, SULFATE ION
著者Xiao, J, Engel, J.L.
登録日2011-04-08
公開日2011-07-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.928 Å)
主引用文献Structural and functional analysis of PTPMT1, a phosphatase required for cardiolipin synthesis.
Proc.Natl.Acad.Sci.USA, 108, 2011
5AXR
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BU of 5axr by Molmil
Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to 2-mercaptoethanesulfonate
分子名称: 1-THIOETHANESULFONIC ACID, Metallo-beta-lactamase, SODIUM ION, ...
著者Wachino, J, Arakawa, Y.
登録日2015-07-31
公開日2016-05-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to 2-mercaptoethanesulfonate
To Be Published
5AYA
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BU of 5aya by Molmil
Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to L-captopril
分子名称: L-CAPTOPRIL, Metallo-beta-lactamase, SODIUM ION, ...
著者Wachino, J, Arakawa, Y.
登録日2015-08-12
公開日2016-05-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to L-captopril
To Be Published
4PVS
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BU of 4pvs by Molmil
Crystal structure of fully-cleaved human l-asparaginase protein in complex with l-aspartate
分子名称: ASPARTIC ACID, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
著者Nomme, J, Lavie, A.
登録日2014-03-18
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
7KYP
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BU of 7kyp by Molmil
PsaBC from Streptococcus pneumoniae in complex with Fab
分子名称: CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE, Manganese ABC transporter, ATP-binding protein, ...
著者Maher, M.J, Sjohamn, J.
登録日2020-12-08
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structural basis of bacterial manganese import.
Sci Adv, 7, 2021
7KYO
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PsaBC from Streptococcus pneumoniae in complex with Fab
分子名称: Fab heavy chain, Fab light chain, Manganese ABC transporter, ...
著者Maher, M.J, Sjohamn, J.
登録日2020-12-08
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The structural basis of bacterial manganese import.
Sci Adv, 7, 2021

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