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PDB: 42745 件

8P8Z
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Crystal structure of the metallo-beta-lactamase VIM1 with 1963
分子名称: 3-[3-cyano-4-(methylsulfonylmethyl)phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-04
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 1963
To Be Published
7TQB
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Crystal structure of monoclonal S9.6 Fab bound to DNA-RNA hybrid
分子名称: DNA, FAB S9.6 Heavy Chain, FAB S9.6 Light Chain, ...
著者Bou-Nader, C, Zhang, J.
登録日2022-01-26
公開日2022-03-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis of R-loop recognition by the S9.6 monoclonal antibody.
Nat Commun, 13, 2022
5K2J
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Crystal structure of reduced Prx3 in complex with h2o2 from Vibrio vulnificus
分子名称: 1-Cys peroxiredoxin, HYDROGEN PEROXIDE
著者Ahn, J, Ha, N.-C.
登録日2016-05-19
公開日2017-05-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.908 Å)
主引用文献Crystal structure of peroxiredoxin 3 fromVibrio vulnificusand its implications for scavenging peroxides and nitric oxide.
IUCrJ, 5, 2018
8P9S
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Crystal structure of the metallo-beta-lactamase VIM1 with 2482
分子名称: 7-[(1~{S})-1-[4-(aminomethyl)phenyl]carbonyloxyethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, DIMETHYL SULFOXIDE, ...
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-06
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2482
To Be Published
8PA7
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Crystal structure of the metallo-beta-lactamase VIM1 with 2546
分子名称: 3-[4-[[[(2~{S})-2-azanyl-3-oxidanyl-propanoyl]amino]methyl]-3-fluoranyl-phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, DIMETHYL SULFOXIDE, ...
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-07
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2546
To Be Published
3K21
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Crystal Structure of carboxy-terminus of PFC0420w.
分子名称: ACETATE ION, CALCIUM ION, Calcium-dependent protein kinase 3, ...
著者Wernimont, A.K, Hutchinson, A, Artz, J.D, Mackenzie, F, Cossar, D, Kozieradzki, I, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Hui, R, Amani, M, Structural Genomics Consortium (SGC)
登録日2009-09-29
公開日2010-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structures of parasitic CDPK domains point to a common mechanism of activation.
Proteins, 79, 2011
8CXS
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CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor MTA
分子名称: 1,2-ETHANEDIOL, 5'-DEOXY-5'-METHYLTHIOADENOSINE, DNA Strand 1, ...
著者Horton, J.R, Zhou, J, Cheng, X.
登録日2022-05-22
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Systematic Design of Adenosine Analogs as Inhibitors of a Clostridioides difficile- Specific DNA Adenine Methyltransferase Required for Normal Sporulation and Persistence.
J.Med.Chem., 66, 2023
8P4M
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CryoEM structure of a C7-symmetrical GroEL7-GroES7 cage in presence of ADP-BeFx
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
著者Wagner, J, Beck, F, Bracher, A, Caravajal, A.I, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8OVQ
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Crystal structure of Geodia cydonium sponge adhesion molecule long form (SAML).
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell recognition molecule, ...
著者Lopez-Sagaseta, J, Urdiciain, A.
登録日2023-04-26
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Crystal structure of Geodia cydonium sponge adhesion molecule long form (SAML).
To Be Published
8CXV
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CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Compound 3
分子名称: 1,2-ETHANEDIOL, DNA Strand 1, DNA Strand 2, ...
著者Horton, J.R, Zhou, J, Cheng, X.
登録日2022-05-22
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Systematic Design of Adenosine Analogs as Inhibitors of a Clostridioides difficile- Specific DNA Adenine Methyltransferase Required for Normal Sporulation and Persistence.
J.Med.Chem., 66, 2023
8CXT
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CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor N6-benzyladenosine (Compound 1)
分子名称: 1,2-ETHANEDIOL, DNA Strand 1, DNA Strand 2, ...
著者Horton, J.R, Zhou, J, Cheng, X.
登録日2022-05-22
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Systematic Design of Adenosine Analogs as Inhibitors of a Clostridioides difficile- Specific DNA Adenine Methyltransferase Required for Normal Sporulation and Persistence.
J.Med.Chem., 66, 2023
8CY1
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CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Compound 19
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*AP*TP*GP*GP*GP*AP*CP*TP*TP*TP*TP*TP*GP*A)-3'), N-(5-phenylpentyl)adenosine, ...
著者Zhou, J, Horton, J.R, Cheng, X.
登録日2022-05-22
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Systematic Design of Adenosine Analogs as Inhibitors of a Clostridioides difficile- Specific DNA Adenine Methyltransferase Required for Normal Sporulation and Persistence.
J.Med.Chem., 66, 2023
8P4R
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BU of 8p4r by Molmil
In situ structure average of GroEL14-GroES14 complexes in Escherichia coli cytosol obtained by cryo electron tomography
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, Co-chaperonin GroES, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (11.9 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8P4N
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CryoEM structure of a GroEL7-GroES7 cage with encapsulated disordered substrate MetK in the presence of ADP-BeFx
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
著者Wagner, J, Beck, F, Bracher, A, Caravajal, A.I, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8CXY
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CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor N6-(2-Phenethyl)adenosine (Compound 8)
分子名称: 1,2-ETHANEDIOL, DNA Strand 1, DNA Strand 2, ...
著者Horton, J.R, Zhou, J, Cheng, X.
登録日2022-05-22
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Systematic Design of Adenosine Analogs as Inhibitors of a Clostridioides difficile- Specific DNA Adenine Methyltransferase Required for Normal Sporulation and Persistence.
J.Med.Chem., 66, 2023
8P8Y
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BU of 8p8y by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 1657
分子名称: 3-(2-acetamido-1,3-benzothiazol-7-yl)-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-04
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 1657
To Be Published
8WIA
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BU of 8wia by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463S
分子名称: Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
8CXZ
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CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor N6-(3-Phenylpropyl)adenosine (Compound 14)
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*AP*TP*GP*GP*GP*AP*CP*TP*TP*TP*TP*TP*GP*A)-3'), N-(3-phenylpropyl)adenosine, ...
著者Zhou, J, Horton, J.R, Cheng, X.
登録日2022-05-22
公開日2023-01-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Systematic Design of Adenosine Analogs as Inhibitors of a Clostridioides difficile- Specific DNA Adenine Methyltransferase Required for Normal Sporulation and Persistence.
J.Med.Chem., 66, 2023
8P95
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Crystal structure of the metallo-beta-lactamase VIM1 with 2407
分子名称: 3-(2-ethoxypyridin-3-yl)-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-05
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2407
To Be Published
8WIG
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BU of 8wig by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463S/Q484A
分子名称: Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
8PA3
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Crystal structure of the metallo-beta-lactamase VIM1 with 2500
分子名称: 7-[(1~{S})-1-[4-(2-azanylethyl)phenoxy]ethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-07
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 2500
To Be Published
8WIH
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BU of 8wih by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463A in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
8P4P
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BU of 8p4p by Molmil
Structure average of GroEL14 complexes found in the cytosol of Escherichia coli overexpressing GroEL obtained by cryo electron tomography
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8CTF
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The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxylic acid
分子名称: 3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxylic acid, ACETATE ION, MANGANESE (II) ION, ...
著者Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
登録日2022-05-14
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
8WIJ
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Crystal structure of E. coli ThrS catalytic domain mutant L489M in complex with Obafluorin
分子名称: N-(2,3-dihydroxybenzoyl)-4-(4-nitrophenyl)-L-threonine, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024

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件を2024-09-25に公開中

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