Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42745 件

6FKE
DownloadVisualize
BU of 6fke by Molmil
Structure of 3' phosphatase NExo (D146N) from Neisseria bound to product DNA hairpin
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*GP*TP*AP*GP*CP*GP*AP*AP*GP*CP*TP*A)-3'), Exodeoxyribonuclease III, ...
著者Silhan, J, Zhao, Q, Boura, E, Thomson, H, Foster, A, Tang, C.M, Freemont, P.S, Baldwin, G.S.
登録日2018-01-23
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Structural basis for recognition and repair of the 3'-phosphate by NExo, a base excision DNA repair nuclease from Neisseria meningitidis.
Nucleic Acids Res., 46, 2018
6FJE
DownloadVisualize
BU of 6fje by Molmil
Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with fructose and glucose
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ramirez-Escudero, M, Sanz-Aparicio, J.
登録日2018-01-22
公開日2019-07-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Deciphering the molecular specificity of phenolic compounds as inhibitors or glycosyl acceptors of beta-fructofuranosidase from Xanthophyllomyces dendrorhous.
Sci Rep, 9, 2019
6FKO
DownloadVisualize
BU of 6fko by Molmil
Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, hadacidin at 2.1 Angstrom resolution
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase, ...
著者Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
登録日2018-01-24
公開日2019-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, HAdacidin at 2.1 Angstrom resolution
To Be Published
6FCH
DownloadVisualize
BU of 6fch by Molmil
Crystal Structure of Human APRT wild type in complex with PRPP and Mg2+
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Adenine phosphoribosyltransferase, MAGNESIUM ION
著者Nioche, P, Huyet, J, Ozeir, M.
登録日2017-12-20
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Insights into the Forward and Reverse Enzymatic Reactions in Human Adenine Phosphoribosyltransferase.
Cell Chem Biol, 25, 2018
5NZS
DownloadVisualize
BU of 5nzs by Molmil
The structure of the COPI coat leaf in complex with the ArfGAP2 uncoating factor
分子名称: ADP-ribosylation factor 1, ADP-ribosylation factor GTPase-activating protein 2, Coatomer subunit alpha, ...
著者Dodonova, S.O, Aderhold, P, Kopp, J, Ganeva, I, Roehling, S, Hagen, W.J.H, Sinning, I, Wieland, F, Briggs, J.A.G.
登録日2017-05-15
公開日2017-06-28
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (10.1 Å)
主引用文献9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.
Elife, 6, 2017
5O33
DownloadVisualize
BU of 5o33 by Molmil
A structure of the GEF Kalirin DH1 domain in complex with the small GTPase Rac1
分子名称: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, Kalirin, ...
著者Gray, J, Krojer, T, Talon, R, Fairhead, M, Bountra, C, Arrowsmith, C.H, Edwards, A, Brennan, P, von Delft, F.
登録日2017-05-23
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献A structure of the GEF Kalirin DH1 domain in complex with the small GTPase Rac1
To Be Published
5H74
DownloadVisualize
BU of 5h74 by Molmil
Crystal structure of T2R-TTL-14b complex
分子名称: (2~{S},4~{R})-4-[[2-[(1~{R},3~{R})-1-acetyloxy-3-[hexyl-[(2~{S},3~{S})-3-methyl-2-[[(2~{R})-1-methylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-4-methyl-pentyl]-1,3-thiazol-4-yl]carbonylamino]-5-(4-fluorophenyl)-2-methyl-pentanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Yu, Y, Chen, Q, Yang, J.
登録日2016-11-17
公開日2017-11-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-Activity Relationship Studies of Tubulysin Analogues: Anticancer N-Alkyltubulysins with Subpicomolar Activity and the Crystal Structure Binding to Tubulin
To Be Published
1GL3
DownloadVisualize
BU of 1gl3 by Molmil
ASPARTATE BETA-SEMIALDEHYDE DEHYDROGENASE IN COMPLEX WITH NADP AND SUBSTRATE ANALOGUE S-METHYL CYSTEINE SULFOXIDE
分子名称: ASPARTATE-SEMIALDEHYDE DEHYDROGENASE, CYSTEINE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Hadfield, A.T, Kryger, G, Ouyang, J, Ringe, D, Petsko, G.A, Viola, R.E.
登録日2001-08-23
公開日2001-11-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Active Site Analysis of the Potential Antimicrobial Target Aspartate Semialdehyde Dehydrogenase.
Biochemistry, 40, 2001
6FJV
DownloadVisualize
BU of 6fjv by Molmil
Rpn11 homolog from Caldiarchaeum Subterraneum, truncated
分子名称: 26S proteasome regulatory subunit N11-like protein, SULFATE ION
著者Fuchs, A.C.D, Albrecht, R, Martin, J, Hartmann, M.D.
登録日2018-01-23
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Rpn11-mediated ubiquitin processing in an ancestral archaeal ubiquitination system.
Nat Commun, 9, 2018
5H8O
DownloadVisualize
BU of 5h8o by Molmil
Crystal structure of an ASC-binding nanobody in complex with the CARD domain of ASC
分子名称: Apoptosis-associated speck-like protein containing a CARD, VHH nanobody
著者Lu, A, Schmidt, F.I, Ruan, J, Tang, C, Wu, H, Ploegh, H.L.
登録日2015-12-23
公開日2016-04-06
最終更新日2016-05-18
実験手法X-RAY DIFFRACTION (4.206 Å)
主引用文献A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly.
J.Exp.Med., 213, 2016
5NX2
DownloadVisualize
BU of 5nx2 by Molmil
Crystal structure of thermostabilised full-length GLP-1R in complex with a truncated peptide agonist at 3.7 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glucagon-like peptide 1 receptor, ...
著者Rappas, M, Jazayeri, A, Brown, A.J.H, Kean, J, Errey, J.C, Robertson, N, Fiez-Vandal, C, Andrews, S.P, Congreve, M, Bortolato, A, Mason, J.S, Baig, A.H, Teobald, I, Dore, A.S, Weir, M, Cooke, R.M, Marshall, F.H.
登録日2017-05-09
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal structure of the GLP-1 receptor bound to a peptide agonist.
Nature, 546, 2017
6FKI
DownloadVisualize
BU of 6fki by Molmil
Chloroplast F1Fo conformation 3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
著者Hahn, A, Vonck, J, Mills, D.J, Meier, T, Kuehlbrandt, W.
登録日2018-01-24
公開日2018-05-23
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure, mechanism, and regulation of the chloroplast ATP synthase.
Science, 360, 2018
5NZR
DownloadVisualize
BU of 5nzr by Molmil
The structure of the COPI coat leaf
分子名称: ADP-ribosylation factor 1, Coatomer subunit alpha, Coatomer subunit beta, ...
著者Dodonova, S.O, Aderhold, P, Kopp, J, Ganeva, I, Roehling, S, Hagen, W.J.H, Sinning, I, Wieland, F, Briggs, J.A.G.
登録日2017-05-15
公開日2017-06-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9.2 Å)
主引用文献9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.
Elife, 6, 2017
5O61
DownloadVisualize
BU of 5o61 by Molmil
The complete structure of the Mycobacterium smegmatis 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hentschel, J, Burnside, C, Mignot, I, Leibundgut, M, Boehringer, D, Ban, N.
登録日2017-06-03
公開日2017-07-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献The Complete Structure of the Mycobacterium smegmatis 70S Ribosome.
Cell Rep, 20, 2017
5GUP
DownloadVisualize
BU of 5gup by Molmil
Cryo-EM structure of mammalian respiratory supercomplex I1III2IV1
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acyl carrier protein, ...
著者Gu, J, Wu, M, Guo, R, Yang, M.
登録日2016-08-30
公開日2017-03-29
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of Mammalian Respiratory Supercomplex I1III2IV1
Cell, 167, 2016
5GYZ
DownloadVisualize
BU of 5gyz by Molmil
luciferase AMP/7-cy-L complex
分子名称: (4S)-2-[6-(azepan-1-yl)-1,3-benzothiazol-2-yl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid, ADENOSINE MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Su, J, Wang, F.
登録日2016-09-26
公開日2017-09-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of luciferase with AMP/7-cy-L at 2.4 Angstroms resolution
To Be Published
6FIG
DownloadVisualize
BU of 6fig by Molmil
Crystal structure of the ANX1 ectodomain from Arabidopsis thaliana
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Santiago, J.
登録日2018-01-18
公開日2018-07-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structures of two tandem malectin-like receptor kinases involved in plant reproduction.
Acta Crystallogr D Struct Biol, 74, 2018
5O0V
DownloadVisualize
BU of 5o0v by Molmil
crystal structure of E. coli GAP-DH by fortuitous crystallization as an impurity from a solution of human liver FBPase
分子名称: GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase A
著者Ruf, A, Benz, J, Rudolph, M.G.
登録日2017-05-17
公開日2017-07-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献fortuitous crystallization of GAP-DH impurity from a solution of human liver FBPase
To Be Published
5O12
DownloadVisualize
BU of 5o12 by Molmil
Crystal structure of PIM1 kinase in complex with small-molecule inhibitor
分子名称: (5E)-5-(quinolin-6-ylmethylidene)-2-[(thiophen-2-ylmethyl)amino]-1,3-thiazol-4(5H)-one, IMIDAZOLE, Serine/threonine-protein kinase pim-1
著者Dubin, G, Bogusz, J.
登録日2017-05-17
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural analysis of PIM1 kinase complexes with ATP-competitive inhibitors.
Sci Rep, 7, 2017
1GND
DownloadVisualize
BU of 1gnd by Molmil
GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR, ALPHA-ISOFORM
分子名称: GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR
著者Schalk, I, Zeng, K, Wu, S.-K, Stura, E.A, Metteson, J, Huang, M, Tandon, A, Wilson, I.A, Balch, W.E.
登録日1996-07-10
公開日1997-02-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure and mutational analysis of Rab GDP-dissociation inhibitor.
Nature, 381, 1996
5O4U
DownloadVisualize
BU of 5o4u by Molmil
The flagellin of Pyrococcus furiosus
分子名称: Flagellin
著者Daum, B, Vonck, J.
登録日2017-05-31
公開日2017-07-05
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure andin situorganisation of thePyrococcus furiosusarchaellum machinery.
Elife, 6, 2017
6EJQ
DownloadVisualize
BU of 6ejq by Molmil
Crystal structure of a C-terminally truncated small terminase protein from the thermophilic bacteriophage G20c
分子名称: Terminase small subunit
著者Xu, R.G, Loredo-Varela, J, Jenkins, H.T, Antson, A.A.
登録日2017-09-22
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a C-terminally truncated small terminase protein from the thermophilic bacteriophage G20c
To Be Published
5H3V
DownloadVisualize
BU of 5h3v by Molmil
Crystal structure of a Type IV Secretion System Component CagX in Helicobacter pylori
分子名称: Cag8, DI(HYDROXYETHYL)ETHER, ISOPROPYL ALCOHOL
著者Zhang, J, Wu, Y, Zhao, Y, Sun, L, Keegan, R.M, Liu, Y, Isupov, M.N.
登録日2016-10-27
公開日2017-04-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of the type IV secretion system component CagX from Helicobacter pylori
Acta Crystallogr F Struct Biol Commun, 73, 2017
6EN3
DownloadVisualize
BU of 6en3 by Molmil
Crystal structure of full length EndoS from Streptococcus pyogenes in complex with G2 oligosaccharide.
分子名称: CALCIUM ION, Endo-beta-N-acetylglucosaminidase F2,Multifunctional-autoprocessing repeats-in-toxin, NICKEL (II) ION, ...
著者Trastoy, B, Klontz, E.H, Orwenyo, J, Marina, A, Wang, L.X, Sundberg, E.J, Guerin, M.E.
登録日2017-10-04
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Structural basis for the recognition of complex-type N-glycans by Endoglycosidase S.
Nat Commun, 9, 2018
6ENZ
DownloadVisualize
BU of 6enz by Molmil
Crystal structure of mouse GADL1
分子名称: Acidic amino acid decarboxylase GADL1, PYRIDOXAL-5'-PHOSPHATE
著者Raasakka, A, Mahootchi, E, Winge, I, Luan, W, Kursula, P, Haavik, J.
登録日2017-10-07
公開日2018-01-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the mouse acidic amino acid decarboxylase GADL1.
Acta Crystallogr F Struct Biol Commun, 74, 2018

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon