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PDB: 42745 results

3KGQ
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Carboxypeptidase A liganded to an organic small-molecule: conformational changes
Descriptor: ACETONE, CITRIC ACID, Carboxypeptidase A1, ...
Authors:Fernandez, D, Boix, E, Pallares, I, Aviles, F.X, Vendrell, J.
Deposit date:2009-10-29
Release date:2010-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Analysis of the Complex between Citrate and the Zinc Peptidase Carboxypeptidase A
Enzyme Res, 2011, 2011
8DLA
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BU of 8dla by Molmil
ClpP2 from Chlamydia trachomatis bound by MAS1-12
Descriptor: 1-{4-[(4-chlorophenyl)methyl]piperazin-1-yl}-2-methyl-2-[5-(trifluoromethyl)pyridine-2-sulfonyl]propan-1-one, ATP-dependent Clp protease proteolytic subunit 2, GLYCEROL, ...
Authors:Azadmanesh, J, Struble, L.R, Seleem, M.A, Ouellette, S, Conda-Sheridan, M, Borgstahl, G.E.O.
Deposit date:2022-07-07
Release date:2023-08-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The structure of caseinolytic protease subunit ClpP2 reveals a functional model of the caseinolytic protease system from Chlamydia trachomatis.
J.Biol.Chem., 299, 2023
3MTU
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BU of 3mtu by Molmil
Structure of the Tropomyosin Overlap Complex from Chicken Smooth Muscle
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Capsid assembly scaffolding protein,Tropomyosin alpha-1 chain, ...
Authors:Klenchin, V.A, Frye, J, Rayment, I.
Deposit date:2010-04-30
Release date:2010-06-23
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the tropomyosin overlap complex from chicken smooth muscle: insight into the diversity of N-terminal recognition .
Biochemistry, 49, 2010
8K2D
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BU of 8k2d by Molmil
Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A
Descriptor: 18S rRNA, 23S rRNA, 40S ribosomal protein S1-A, ...
Authors:Buschauer, R, Beckmann, R, Cheng, J.
Deposit date:2023-07-12
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
1A34
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BU of 1a34 by Molmil
SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX
Descriptor: PROTEIN (SATELLITE TOBACCO MOSAIC VIRUS), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ...
Authors:Larson, S.B, Day, J, Greenwood, A.J, McPherson, A.
Deposit date:1998-01-28
Release date:1998-04-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Refined structure of satellite tobacco mosaic virus at 1.8 A resolution.
J.Mol.Biol., 277, 1998
5JFN
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BU of 5jfn by Molmil
Crystal structure of Rhodopseudomonas palustris propionaldehyde dehydrogenase with bound CoA and acylated Cys330
Descriptor: Aldehyde dehydrogenase, COENZYME A, PENTAETHYLENE GLYCOL, ...
Authors:Zarzycki, J, Sutter, M, Kerfeld, C.A.
Deposit date:2016-04-19
Release date:2017-03-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:In Vitro Characterization and Concerted Function of Three Core Enzymes of a Glycyl Radical Enzyme - Associated Bacterial Microcompartment.
Sci Rep, 7, 2017
3KAZ
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BU of 3kaz by Molmil
Crystal structure of abscisic acid receptor PYL2
Descriptor: 1,3-BUTANEDIOL, Putative uncharacterized protein At2g26040
Authors:Zhou, X.E, Melcher, K, Ng, L.-M, Soon, F.-F, Xu, Y, Suino-Powell, K.M, Kovach, A, Li, J, Xu, H.E.
Deposit date:2009-10-19
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Agate-latch-lock mechanism for hormone signalling by abscisic acid receptors
Nature, 462, 2009
5JLX
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BU of 5jlx by Molmil
AntpHD with 15bp DNA duplex S-monothioated at Cytidine-8
Descriptor: DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*(C7S)P*AP*TP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3'), Homeotic protein antennapedia, ...
Authors:White, M.A, Zandarashvili, L, Iwahara, J, Nguyen, D.
Deposit date:2016-04-27
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.748 Å)
Cite:Stereospecific Effects of Oxygen-to-Sulfur Substitution in DNA Phosphate on Ion Pair Dynamics and Protein-DNA Affinity.
Chembiochem, 17, 2016
8K82
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BU of 8k82 by Molmil
Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA
Descriptor: 18S rRNA, 23S rRNA, 40S ribosomal protein S1-A, ...
Authors:Buschauer, R, Beckmann, R, Cheng, J.
Deposit date:2023-07-28
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
5JME
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BU of 5jme by Molmil
Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA
Descriptor: Soluble acetylcholine receptor, alpha-conotoxin PeIA from Conus pergrandis
Authors:Bobango, J, Sankaran, B, McIntosh, J.M, Talley, T.T.
Deposit date:2016-04-28
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.336 Å)
Cite:Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA
To Be Published
8EC7
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BU of 8ec7 by Molmil
HnRNPA2 D290V LCD PM3
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Eisenberg, D.S, Lu, J, Ge, P, Boyer, D.R.
Deposit date:2022-09-01
Release date:2023-09-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation.
J.Biol.Chem., 300, 2023
5JIG
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BU of 5jig by Molmil
Crytsal structure of Wss1 from S. pombe
Descriptor: NICKEL (II) ION, OXYGEN MOLECULE, Ubiquitin and WLM domain-containing metalloprotease SPCC1442.07c
Authors:Groll, M, Stingele, J, Boulton, S.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Mechanism and Regulation of DNA-Protein Crosslink Repair by the DNA-Dependent Metalloprotease SPRTN.
Mol.Cell, 64, 2016
8WHB
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BU of 8whb by Molmil
Structure of nucleosome core particle of Arabidopsis thaliana
Descriptor: DNA (antisense strand), DNA (sense strand), Histone H2A.6, ...
Authors:Liu, Y, Zhang, Z, Du, J.
Deposit date:2023-09-23
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Nat.Plants, 10, 2024
3KIG
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BU of 3kig by Molmil
Mutant carbonic anhydrase II in complex with an azide and an alkyne
Descriptor: 2-azido-N-(2-sulfanylethyl)ethanamide, 3-ethynylbenzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Schulze-Wischeler, J, Niehage, N.U, Heine, A, Klebe, G.
Deposit date:2009-11-02
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Stereo- and Regioselective Azide/Alkyne Cycloadditions in Carbonic Anhydrase II via Tethering, Monitored by Crystallography and Mass Spectrometry.
Chemistry, 17, 2011
8JPS
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BU of 8jps by Molmil
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Composite map)
Descriptor: Atypical chemokine receptor 1, C-C motif chemokine 7
Authors:Banerjee, R, Khanppnavar, B, Maharana, J, Saha, S, Korkhov, V.M, Shukla, A.K.
Deposit date:2023-06-12
Release date:2024-07-31
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Molecular mechanism of distinct chemokine engagement and functional divergence of the human Duffy antigen receptor.
Cell, 187, 2024
8WD2
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BU of 8wd2 by Molmil
The Crystal Structure of p53 from Biortus.
Descriptor: 1,2-ETHANEDIOL, Cellular tumor antigen p53, PHOSPHATE ION, ...
Authors:Wang, F, Cheng, W, Yuan, Z, Qi, J, Lu, Y.
Deposit date:2023-09-14
Release date:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of p53 from Biortus.
To Be Published
8EAP
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BU of 8eap by Molmil
Cryo-EM structure of the in-situ gp10-gp26 from bacteriophage P22
Descriptor: Packaged DNA stabilization protein gp10, Tail needle protein gp26
Authors:Wang, C, Liu, J, Molineux, I.J.
Deposit date:2022-08-29
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:In-situ structure of tail machine reveals mechanistic insights into P22 assembly
To Be Published
5IVL
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BU of 5ivl by Molmil
CshA Helicase
Descriptor: DEAD-box ATP-dependent RNA helicase CshA, SULFATE ION
Authors:Huen, J, Lin, C.-L, Yi, W.-L, Li, C.-L, Yuan, H.
Deposit date:2016-03-21
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into a Unique Dimeric DEAD-Box Helicase CshA that Promotes RNA Decay.
Structure, 25, 2017
8EB7
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BU of 8eb7 by Molmil
Cryo-EM structure of the in-situ gp4-gp10-gp9N from bacteriophage P22
Descriptor: Packaged DNA stabilization protein gp10, Peptidoglycan hydrolase gp4, Tail spike protein
Authors:Wang, C, Liu, J, Molineux, I.J.
Deposit date:2022-08-30
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:In-situ structure of tail machine reveals mechanistic insights into P22 assembly
To Be Published
7VCK
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BU of 7vck by Molmil
NMR solution structures of a hairpin formed by GGCCTG repeats
Descriptor: DNA (5'-D(*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*G)-3'), SODIUM ION
Authors:Yi, J, Wan, L, Guo, P.
Deposit date:2021-09-03
Release date:2022-02-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution structures of d(GGCCTG)n repeats associated with spinocerebellar ataxia type 36.
Int.J.Biol.Macromol., 201, 2022
5J39
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BU of 5j39 by Molmil
Crystal Structure of the extended TUDOR domain from TDRD2
Descriptor: CACODYLATE ION, Tudor and KH domain-containing protein, UNKNOWN ATOM OR ION
Authors:Zhang, H, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-03-30
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for arginine methylation-independent recognition of PIWIL1 by TDRD2.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8EAN
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BU of 8ean by Molmil
Cryo-EM structure of in-situ tailspike in bacteriophage P22
Descriptor: Tail spike protein
Authors:Wang, C, Liu, J, Molineux, I.J.
Deposit date:2022-08-29
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:In-situ structure of tail machine reveals mechanistic insights into P22 assembly.
To Be Published
8EAO
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BU of 8eao by Molmil
Cryo-EM structure of the in-situ gp1-gp4 complex from bacteriophage P22
Descriptor: Peptidoglycan hydrolase gp4, Portal protein
Authors:Wang, C, Liu, J, Molineux, I.J.
Deposit date:2022-08-29
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:In-situ structure of tail machine reveals mechanistic insights into P22 assembly.
To Be Published
8KAB
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BU of 8kab by Molmil
Mycobacterium smegmatis 50S ribosomal subunit-HflX complex
Descriptor: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Srinivasan, K, Banerjee, A, Sengupta, J.
Deposit date:2023-08-02
Release date:2024-07-31
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures reveal the molecular mechanism of HflX-mediated erythromycin resistance in mycobacteria.
Structure, 32, 2024
5IYV
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BU of 5iyv by Molmil
Crystal structure of the Arabidopsis receptor kinase HAESA LRR ectdomain in complex with the peptide hormone IDL1.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Santiago, J, Hothorn, M.
Deposit date:2016-03-24
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife, 5, 2016

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PDB entries from 2024-09-25

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