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PDB: 22488 results

6TG0
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BU of 6tg0 by Molmil
Crystal Structure of EGFR T790M/V948R in Complex with Covalent Pyrrolopyrimidine 21a
Descriptor: 1,2-ETHANEDIOL, Epidermal growth factor receptor, SULFATE ION, ...
Authors:Niggenaber, J, Mueller, M.P, Rauh, D.
Deposit date:2019-11-14
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Targeting Her2-insYVMA with Covalent Inhibitors-A Focused Compound Screening and Structure-Based Design Approach.
J.Med.Chem., 63, 2020
3E8V
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BU of 3e8v by Molmil
Crystal structure of a possible transglutaminase-family protein proteolytic fragment from Bacteroides fragilis
Descriptor: Possible transglutaminase-family protein, UNKNOWN LIGAND
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Hu, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-20
Release date:2008-09-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a possible transglutaminase-family protein proteolytic fragment from Bacteroides fragilis
To be Published
6TKL
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BU of 6tkl by Molmil
Non-cleavable tsetse thrombin inhibitor in complex with human alpha-thrombin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Prothrombin, ...
Authors:Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
Deposit date:2019-11-28
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
3E8W
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BU of 3e8w by Molmil
Crystal Structure of Epiphyas postvittana Takeout 1
Descriptor: Takeout-like protein 1, Ubiquinone-8
Authors:Hamiaux, C, Stanley, D, Greenwood, D.R, Baker, E.N, Newcomb, R.D.
Deposit date:2008-08-20
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Epiphyas postvittana takeout 1 with bound ubiquinone supports a role as ligand carriers for takeout proteins in insects
J.Biol.Chem., 284, 2009
6TKI
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BU of 6tki by Molmil
Tsetse thrombin inhibitor in complex with human alpha-thrombin - tetragonal form at 12.7keV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Thrombin heavy chain, ...
Authors:Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
Deposit date:2019-11-28
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
6TO8
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BU of 6to8 by Molmil
Neck of empty GTA particle computed with C12 symmetry
Descriptor: Adaptor protein Rcc01688, Portal protein Rcc01684
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-12-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TNH
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BU of 6tnh by Molmil
Deoxyguanylosuccinate synthase (DgsS) quaternary structure with AMPPcP, dGMP, Asp, Magnesium at 2.21 Angstrom resolution
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ASPARTIC ACID, Adenylosuccinate synthetase, ...
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2019-12-08
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes.
Science, 372, 2021
6TNT
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BU of 6tnt by Molmil
SUMOylated apoAPC/C with repositioned APC2 WHB domain
Descriptor: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ...
Authors:Barford, D, Yatskevich, S.
Deposit date:2019-12-10
Release date:2021-01-13
Last modified:2021-07-28
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:Molecular mechanisms of APC/C release from spindle assembly checkpoint inhibition by APC/C SUMOylation.
Cell Rep, 34, 2021
6T3C
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BU of 6t3c by Molmil
Crystal structure of PI3Kgamma in complex with DNA-PK inhibitor AZD7648
Descriptor: 7-methyl-2-[(7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)amino]-9-(oxan-4-yl)purin-8-one, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Schimpl, M, Goldberg, F.W, Finlay, M.R.V, Ting, A.K.T, Beattie, D, Lamont, G.M, Fallan, C, Wrigley, G.L, Howard, M.R, Williamson, B, Davies, B.R, Cadogan, E.B, Ramos-Montoya, A, Dean, E.
Deposit date:2019-10-10
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:The Discovery of 7-Methyl-2-[(7-methyl[1,2,4]triazolo[1,5-a]pyridin-6-yl)amino]-9-(tetrahydro-2H-pyran-4-yl)-7,9-dihydro-8H-purin-8-one (AZD7648), a Potent and Selective DNA-Dependent Protein Kinase (DNA-PK) Inhibitor.
J.Med.Chem., 63, 2020
3EF4
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BU of 3ef4 by Molmil
Crystal structure of native pseudoazurin from Hyphomicrobium denitrificans
Descriptor: Blue copper protein, COPPER (II) ION, PHOSPHATE ION
Authors:Hira, D, Nojiri, M, Suzuki, S.
Deposit date:2008-09-08
Release date:2008-12-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Atomic resolution structure of pseudoazurin from the methylotrophic denitrifying bacterium Hyphomicrobium denitrificans: structural insights into its spectroscopic properties
Acta Crystallogr.,Sect.D, 65, 2009
3E29
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BU of 3e29 by Molmil
X-Ray structure of the protein Q7WE92_BORBR from thioesterase superfamily. Northeast Structural Genomics Consortium Target BoR214A.
Descriptor: uncharacterized protein Q7WE92_BORBR
Authors:Kuzin, A.P, Chen, Y, Setharaman, J, Wang, D, Mao, L, Foote, E.L, Xiao, R, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-08-05
Release date:2008-09-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-Ray structure of the protein Q7WE92_BORBR from thioesterase superfamily. Northeast Structural Genomics Consortium Target BoR214A.
To be Published
6TAY
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BU of 6tay by Molmil
Mouse RNF213 mutant R4753K modeling the Moyamoya-disease-related Human variant R4810K
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNF213,E3 ubiquitin-protein ligase RNF213,E3 ubiquitin-protein ligase RNF213, ...
Authors:Ahel, J, Meinhart, A, Haselbach, D, Clausen, T.
Deposit date:2019-10-31
Release date:2020-07-01
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Moyamoya disease factor RNF213 is a giant E3 ligase with a dynein-like core and a distinct ubiquitin-transfer mechanism.
Elife, 9, 2020
6TKJ
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BU of 6tkj by Molmil
Tsetse thrombin inhibitor in complex with human alpha-thrombin - tetragonal form at 7keV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Thrombin heavy chain, Thrombin light chain, ...
Authors:Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
Deposit date:2019-11-28
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
6TSN
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BU of 6tsn by Molmil
Marasmius oreades agglutinin (MOA), papain back.swap W208Q-Q276W variant
Descriptor: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
Authors:Cordara, G, Manna, D, Krengel, U.
Deposit date:2019-12-20
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
6TD7
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BU of 6td7 by Molmil
Structure of truncated hemoglobin THB11 from Chlamydomonas reinhardtii
Descriptor: CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE, THB11
Authors:Huwald, D, Gasper, R, Hemschemeier, A, Hofmann, E.
Deposit date:2019-11-08
Release date:2020-02-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Distinctive structural properties of THB11, a pentacoordinate Chlamydomonas reinhardtii truncated hemoglobin with N- and C-terminal extensions.
J.Biol.Inorg.Chem., 25, 2020
6TSU
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BU of 6tsu by Molmil
Capsid of empty GTA particle computed with C5 symmetry
Descriptor: Major capsid protein Rcc01687, Uncharacterized protein
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-12-21
Release date:2020-07-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TUL
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BU of 6tul by Molmil
Structure of the arginase-2-inhibitory human antigen-binding fragment Fab C0021177
Descriptor: D-MALATE, Fab C0021177 heavy chain (IgG1), Fab C0021177 light chain (IgG1), ...
Authors:Burschowsky, D, Addyman, A, Fiedler, S, Groves, M, Haynes, S, Seewooruthun, C, Carr, M.
Deposit date:2020-01-07
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and functional characterization of C0021158, a high-affinity monoclonal antibody that inhibits Arginase 2 function via a novel non-competitive mechanism of action.
Mabs, 12
6TI7
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BU of 6ti7 by Molmil
Mixing Abeta(1-40) and Abeta(1-42) peptides generates unique amyloid fibrils
Descriptor: Amyloid-beta precursor protein
Authors:Cerofolini, L, Ravera, E, Bologna, S, Wiglenda, T, Boddrich, A, Purfurst, B, Benilova, A, Korsak, M, Gallo, G, Rizzo, D, Gonnelli, L, Fragai, M, De Strooper, B, Wanker, E.E, Luchinat, C.
Deposit date:2019-11-21
Release date:2020-07-22
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Mixing A beta (1-40) and A beta (1-42) peptides generates unique amyloid fibrils.
Chem.Commun.(Camb.), 56, 2020
6T1J
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BU of 6t1j by Molmil
Crystal structure of MLLT1 (ENL) YEATS domain in complexed with piperazine-urea derivative 2
Descriptor: 1,2-ETHANEDIOL, Protein ENL, ~{N}-[[4-(pyrrolidin-1-ylmethyl)phenyl]methyl]-4-thiophen-2-ylcarbonyl-piperazine-1-carboxamide
Authors:Chaikuad, A, Heidenreich, D, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-10-04
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural Insights into Interaction Mechanisms of Alternative Piperazine-urea YEATS Domain Binders in MLLT1.
Acs Med.Chem.Lett., 10, 2019
3EAK
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BU of 3eak by Molmil
NbBCII10 humanized (FGLA mutant)
Descriptor: NbBCII10-FGLA, SULFATE ION
Authors:Vincke, C, Loris, R, Saerens, D, Martinez-Rodriguez, S, Muyldermans, S, Conrath, K.
Deposit date:2008-08-26
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:General strategy to humanize a camelid single-domain antibody and identification of a universal humanized nanobody scaffold.
J.Biol.Chem., 2008
3EDL
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BU of 3edl by Molmil
Kinesin13-Microtubule Ring complex
Descriptor: 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE, Beta tubulin, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Tan, D, Rice, W.J, Sosa, H.
Deposit date:2008-09-03
Release date:2009-01-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (28 Å)
Cite:Structure of the kinesin13-microtubule ring complex.
Structure, 16, 2008
6T9C
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BU of 6t9c by Molmil
Crystal structure of the complex between PPARgamma LBD and the ligand NV1346 (3a)
Descriptor: 4-hexoxy-~{N}-[(2~{S})-3-methyl-1-(oxidanylamino)-1-oxidanylidene-butan-2-yl]benzamide, Peroxisome proliferator-activated receptor gamma
Authors:Pochetti, G, Montanari, R, Capelli, D.
Deposit date:2019-10-27
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Insights into PPAR gamma Phosphorylation and Its Inhibition Mechanism.
J.Med.Chem., 63, 2020
3E61
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BU of 3e61 by Molmil
Crystal structure of a putative transcriptional repressor of ribose operon from Staphylococcus saprophyticus subsp. saprophyticus
Descriptor: GLYCEROL, Putative transcriptional repressor of ribose operon
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-14
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative transcriptional repressor of ribose operon from Staphylococcus saprophyticus subsp. saprophyticus
To be Published
6TAC
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BU of 6tac by Molmil
Human NAMPT deletion mutant in complex with nicotinamide mononucleotide, pyrophosphate, and Mg2+
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Houry, D, Raasakka, A, Kursula, P, Ziegler, M.
Deposit date:2019-10-29
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of structural determinants of NAMPT activity and substrate selectivity
To Be Published
3EFM
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BU of 3efm by Molmil
Structure of the alcaligin outer membrane recepteur FauA from Bordetella pertussis
Descriptor: Ferric alcaligin siderophore receptor, SULFATE ION
Authors:Brillet, K, Lauber, E, Reimmann, C, Armstrong, S.K, Cobessi, D.
Deposit date:2008-09-09
Release date:2009-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Use of an in-house approach to study the three-dimensional structures of various outer membrane proteins: structure of the alcaligin outer membrane transporter FauA from Bordetella pertussis
Acta Crystallogr.,Sect.D, 65, 2009

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