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PDB: 22488 results

3V87
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BU of 3v87 by Molmil
Thaumatin by Classical Hanging Drop Vapour Diffusion after 1.81 MGy X-Ray dose at ESRF ID29 beamline (Worst Case)
Descriptor: GLYCEROL, Thaumatin I
Authors:Belmonte, L, Scudieri, D, Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2011-12-22
Release date:2012-11-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Langmuir-Blodgett nanotemplate and radiation resistance in protein crystals: state of the art.
CRIT.REV.EUKARYOT.GENE EXPR., 22, 2012
3VAZ
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BU of 3vaz by Molmil
Crystal structure of Staphylococcal GAPDH1 in a hexagonal space group
Descriptor: (2R)-2,3-DIHYDROXYPROPANOIC ACID, Glyceraldehyde-3-phosphate dehydrogenase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Roychowdhury, A, Mukherjee, S, Dutta, D, Das, A.K.
Deposit date:2011-12-30
Release date:2013-01-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Crystal structure of Staphylococcal GAPDH1 in a hexagonal space group
To be Published
3VCH
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BU of 3vch by Molmil
Thaumatin by Classical Hanging Drop Vapour Diffusion after 9.05 MGy X-Ray dose at ESRF ID29 beamline (Best Case)
Descriptor: GLYCEROL, Thaumatin I
Authors:Belmonte, L, Pechkova, E, Scudieri, D, Nicolini, C.
Deposit date:2012-01-04
Release date:2012-11-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Langmuir-blodgett nanotemplate and radiation resistance in protein crystals: state of the art.
Crit Rev Eukaryot Gene Expr, 22, 2012
3VCP
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BU of 3vcp by Molmil
The 2.2 Angstrom structure of Stc2 with proline bound in the active site
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, PROLINE, ...
Authors:Daughtry, K.D, Xiao, Y, Stoner-Ma, D, Cho, E, Orville, A.M, Liu, P, Allen, K.N.
Deposit date:2012-01-04
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV-Visible Spectroscopic Analysis of a Rieske-Type Demethylase.
J.Am.Chem.Soc., 134, 2012
3W03
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BU of 3w03 by Molmil
XLF-XRCC4 complex
Descriptor: DNA repair protein XRCC4, Non-homologous end-joining factor 1
Authors:Wu, Q, Ochi, T, Matak-Vinkovic, D, Robinson, C.V, Chirgadze, D.Y, Blundell, T.L.
Deposit date:2012-10-17
Release date:2012-11-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (8.492 Å)
Cite:Non-homologous end-joining partners in a helical dance: structural studies of XLF-XRCC4 interactions
Biochem.Soc.Trans., 39, 2011
6PQ0
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BU of 6pq0 by Molmil
LCP-embedded Proteinase K treated with MPD
Descriptor: CALCIUM ION, Proteinase K
Authors:Bu, G, Zhu, L, Jing, L, Shi, D, Gonen, T, Liu, W, Nannenga, B.L.
Deposit date:2019-07-08
Release date:2020-08-05
Last modified:2023-10-11
Method:ELECTRON CRYSTALLOGRAPHY (2 Å)
Cite:Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.
Structure, 28, 2020
3V8A
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BU of 3v8a by Molmil
Thaumatin by Classical Hanging Drop Vapour Diffusion after 18.1 MGy X-Ray dose at ESRF ID29 beamline (Worst Case)
Descriptor: GLYCEROL, Thaumatin I
Authors:Belmonte, L, Scudieri, D, Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2011-12-22
Release date:2012-11-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Langmuir-Blodgett nanotemplate and radiation resistance in protein crystals: state of the art.
CRIT.REV.EUKARYOT.GENE EXPR., 22, 2012
6PPF
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BU of 6ppf by Molmil
Bacterial 45SRbgA ribosomal particle class B
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Ortega, J, Seffouh, A, Jain, N, Jahagirdar, D, Basu, K, Razi, A, Ni, X, Guarne, A, Britton, R.A.
Deposit date:2019-07-06
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate.
Nucleic Acids Res., 47, 2019
6PRK
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BU of 6prk by Molmil
X-ray Crystal Structure of Bacillus subtilis RicA in complex with RicF
Descriptor: RicA, RicF
Authors:Khaja, F.T, Jeffrey, P.D, Neiditch, M.B, Dubnau, D.
Deposit date:2019-07-10
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure-Function Studies of the Bacillus subtilis Ric Proteins Identify the Fe-S Cluster-Ligating Residues and Their Roles in Development and RNA Processing.
Mbio, 10, 2019
3VQG
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BU of 3vqg by Molmil
Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein
Descriptor: C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION
Authors:Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H.
Deposit date:2012-03-23
Release date:2013-03-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase
To be Published
6PQ4
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BU of 6pq4 by Molmil
LCP-embedded Proteinase K treated with lipase
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Bu, G, Zhu, L, Jing, L, Shi, D, Gonen, T, Liu, W, Nannenga, B.L.
Deposit date:2019-07-08
Release date:2020-08-05
Last modified:2023-10-11
Method:ELECTRON CRYSTALLOGRAPHY (2 Å)
Cite:Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.
Structure, 28, 2020
6PRH
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BU of 6prh by Molmil
X-ray Crystal Structure of Bacillus subtilis RicA
Descriptor: CHLORIDE ION, RicA
Authors:Tarique, F.K, Neiditch, M.B, Dubnau, D.
Deposit date:2019-07-10
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure-Function Studies of the Bacillus subtilis Ric Proteins Identify the Fe-S Cluster-Ligating Residues and Their Roles in Development and RNA Processing.
Mbio, 10, 2019
3VTX
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BU of 3vtx by Molmil
Crystal structure of MamA protein
Descriptor: GLYCEROL, MamA
Authors:Zeytuni, N, Baran, D, Davidov, G, Zarivach, R.
Deposit date:2012-06-08
Release date:2012-10-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inter-phylum structural conservation of the magnetosome-associated TPR-containing protein, MamA
J.Struct.Biol., 180, 2012
3VBO
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BU of 3vbo by Molmil
Crystal structure of formaldehyde treated empty human Enterovirus 71 particle (cryo at 100K)
Descriptor: Genome Polyprotein, capsid protein VP1, capsid protein VP2, ...
Authors:Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
Deposit date:2012-01-02
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
6PMG
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BU of 6pmg by Molmil
Solution structure of the C-terminal zinc finger of the C. elegans protein MEX-5
Descriptor: ZINC ION, Zinc finger protein mex-5
Authors:Massi, F, Tavella, D.
Deposit date:2019-07-01
Release date:2020-04-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Disorder-to-Order Transition Mediates RNA Binding of the Caenorhabditis elegans Protein MEX-5.
Biophys.J., 118, 2020
3W0P
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BU of 3w0p by Molmil
Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia (D198A), ternary complex with ADP and hygromycin B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HYGROMYCIN B VARIANT, Hygromycin-B 4-O-kinase
Authors:Iino, D, Takakura, Y, Fukano, K, Sasaki, Y, Hoshino, T, Ohsawa, K, Nakamura, A, Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
6PZN
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BU of 6pzn by Molmil
Putative SDR from Acinetobacter baumannii Crystal Form 2
Descriptor: 3-ketoacyl-ACP reductase
Authors:Cross, E.M, Aragao, D, Forwood, J.K.
Deposit date:2019-08-01
Release date:2019-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of a short-chain dehydrogenase/reductase from multi-drug resistant Acinetobacter baumannii.
Biochem.Biophys.Res.Commun., 518, 2019
6PSC
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BU of 6psc by Molmil
Antibody scFv-M204 trimeric state
Descriptor: scFv-M204 antibody
Authors:Abskharon, R, Sawaya, M.R, Seidler, P.M, Cascio, D, Eisenberg, D.S.
Deposit date:2019-07-12
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of a conformational antibody that binds tau oligomers and inhibits pathological seeding by extracts from donors with Alzheimer's disease.
J.Biol.Chem., 295, 2020
6PXF
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BU of 6pxf by Molmil
Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
Descriptor: 1,6,6-trimethyl-10,11-dioxo-6,7,8,9,10,11-hexahydrophenanthro[1,2-b]furan-2-sulfonic acid, Cathepsin K
Authors:Law, S, Aguda, A.H, Nguyen, N.T, Brayer, G.D, Bromme, D.
Deposit date:2019-07-25
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
To Be Published
6Q3Z
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BU of 6q3z by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with the inhibitor 16k
Descriptor: (7~{R})-2-[[2-ethoxy-4-(1-methylpiperidin-4-yl)phenyl]amino]-7-ethyl-5-methyl-8-[(4-methylthiophen-2-yl)methyl]-7~{H}-pteridin-6-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
Authors:Heidenreich, D, Watts, E, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Knapp, S, Hoelder, S, Structural Genomics Consortium (SGC)
Deposit date:2018-12-04
Release date:2019-03-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Designing Dual Inhibitors of Anaplastic Lymphoma Kinase (ALK) and Bromodomain-4 (BRD4) by Tuning Kinase Selectivity.
J.Med.Chem., 62, 2019
3W0Q
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BU of 3w0q by Molmil
Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia (N203A), ternary complex with AMP-PNP and hygromycin B
Descriptor: HYGROMYCIN B VARIANT, Hygromycin-B 4-O-kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Iino, D, Takakura, Y, Fukano, K, Sasaki, Y, Hoshino, T, Ohsawa, K, Nakamura, A, Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
6PVB
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BU of 6pvb by Molmil
The structure of NTMT1 in complex with compound 6
Descriptor: AMINO GROUP-()-(2~{S})-2-azanylpropanal-()-ISOLEUCINE-()-ARGININE-()-LYSINE-()-PROLINE-()-AMINO-ACETALDEHYDE-()-9-(5-{[(3S)-3-amino-3-carboxypropyl](pentyl)amino}-5-deoxy-beta-L-arabinofuranosyl)-9H-purin-6-amine, N-terminal Xaa-Pro-Lys N-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Noinaj, N, Chen, D, Huang, R.
Deposit date:2019-07-20
Release date:2020-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the Plasticity in the Active Site of Protein N-terminal Methyltransferase 1 Using Bisubstrate Analogues.
J.Med.Chem., 63, 2020
6Q26
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BU of 6q26 by Molmil
N-Acetylmannosamine kinase from Staphylococcus aureus
Descriptor: Glucokinase
Authors:Coombes, D, North, R.A, Dobson, R.C.J.
Deposit date:2019-08-07
Release date:2020-01-22
Last modified:2020-03-18
Method:X-RAY DIFFRACTION (2.328 Å)
Cite:The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
3W0N
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BU of 3w0n by Molmil
Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia, ternary complex with AMP-PNP and hygromycin B
Descriptor: HYGROMYCIN B VARIANT, Hygromycin-B 4-O-kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Iino, D, Takakura, Y, Fukano, K, Sasaki, Y, Hoshino, T, Ohsawa, K, Nakamura, A, Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3W15
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BU of 3w15 by Molmil
Structure of peroxisomal targeting signal 2 (PTS2) of Saccharomyces cerevisiae 3-ketoacyl-CoA thiolase in complex with Pex7p and Pex21p
Descriptor: 3-ketoacyl-CoA thiolase, peroxisomal, Maltose-binding periplasmic protein, ...
Authors:Pan, D, Nakatsu, T, Kato, H.
Deposit date:2012-11-06
Release date:2013-07-03
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of peroxisomal targeting signal-2 bound to its receptor complex Pex7p-Pex21p
Nat.Struct.Mol.Biol., 20, 2013

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