Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22488 results

1SMH
DownloadVisualize
BU of 1smh by Molmil
Protein kinase A variant complex with completely ordered N-terminal helix
Descriptor: (R,R)-2,3-BUTANEDIOL, N-OCTANOYL-N-METHYLGLUCAMINE, cAMP-Dependent Protein Kinase, ...
Authors:Breitenlechner, C, Engh, R.A, Huber, R, Kinzel, V, Bossemeyer, D, Gassel, M.
Deposit date:2004-03-09
Release date:2004-07-06
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.044 Å)
Cite:The Typically Disordered N-Terminus of PKA Can Fold as a Helix and Project the Myristoylation Site into Solution
Biochemistry, 43, 2004
1XI0
DownloadVisualize
BU of 1xi0 by Molmil
X-ray crystal structure of wild-type Xerocomus chrysenteron lectin XCL
Descriptor: lectin
Authors:Birck, C, Damian, L, Marty-Detraves, C, Lougarre, A, Schulze-Briese, C, Koehl, P, Fournier, D, Paquereau, L, Samama, J.P.
Deposit date:2004-09-21
Release date:2005-08-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:A new lectin family with structure similarity to actinoporins revealed by the crystal structure of Xerocomus chrysenteron lectin XCL
J.Mol.Biol., 344, 2004
1XP0
DownloadVisualize
BU of 1xp0 by Molmil
Catalytic Domain Of Human Phosphodiesterase 5A In Complex With Vardenafil
Descriptor: 2-{2-ETHOXY-5-[(4-ETHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-5-METHYL-7-PROPYLIMIDAZO[5,1-F][1,2,4]TRIAZIN-4(1H)-ONE, MAGNESIUM ION, ZINC ION, ...
Authors:Card, G.L, England, B.P, Suzuki, Y, Fong, D, Powell, B, Lee, B, Luu, C, Tabrizizad, M, Gillette, S, Ibrahim, P.N, Artis, D.R, Bollag, G, Milburn, M.V, Kim, S.-H, Schlessinger, J, Zhang, K.Y.J.
Deposit date:2004-10-07
Release date:2004-12-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Basis for the Activity of Drugs that Inhibit Phosphodiesterases.
STRUCTURE, 12, 2004
1XMK
DownloadVisualize
BU of 1xmk by Molmil
The Crystal structure of the Zb domain from the RNA editing enzyme ADAR1
Descriptor: CADMIUM ION, CHLORIDE ION, Double-stranded RNA-specific adenosine deaminase, ...
Authors:Athanasiadis, A, Placido, D, Maas, S, Brown II, B.A, Lowenhaupt, K, Rich, A.
Deposit date:2004-10-03
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:The Crystal Structure of the Z[beta] Domain of the RNA-editing Enzyme ADAR1 Reveals Distinct Conserved Surfaces Among Z-domains.
J.Mol.Biol., 351, 2005
1SDI
DownloadVisualize
BU of 1sdi by Molmil
1.65 A structure of Escherichia coli ycfC gene product
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Hypothetical protein ycfC
Authors:Borek, D, Otwinowski, Z, Chen, Y, Skarina, T, Savchenko, A, Edwards, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-02-13
Release date:2004-08-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural analysis of Escherichia coli ycfC gene product
To be Published
1SCD
DownloadVisualize
BU of 1scd by Molmil
X-RAY CRYSTAL STRUCTURE OF CROSS-LINKED SUBTILISM CARLSBERG IN WATER VS. ACETONITRILE
Descriptor: CALCIUM ION, SUBTILISIN CARLSBERG
Authors:Fitzpatrick, P.A, Ringe, D, Klibanov, A.M.
Deposit date:1993-08-23
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystal structure of cross-linked subtilisin Carlsberg in water vs. acetonitrile.
Biochem.Biophys.Res.Commun., 198, 1994
1XQF
DownloadVisualize
BU of 1xqf by Molmil
The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.
Descriptor: ACETATE ION, Probable ammonium transporter, SULFATE ION
Authors:Zheng, L, Kostrewa, D, Berneche, S, Winkler, F.K, Li, X.-D.
Deposit date:2004-10-12
Release date:2004-10-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli
Proc.Natl.Acad.Sci.USA, 101, 2004
1SF3
DownloadVisualize
BU of 1sf3 by Molmil
Structure of the reduced form of the P94A mutant of amicyanin
Descriptor: Amicyanin, COPPER (I) ION, PHOSPHATE ION
Authors:Carrell, C.J, Sun, D, Jiang, S, Davidson, V.L, Mathews, F.S.
Deposit date:2004-02-19
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structural Studies of Two Mutants of Amicyanin from Paracoccus denitrificans That Stabilize the Reduced State of the Copper.
Biochemistry, 43, 2004
1IO2
DownloadVisualize
BU of 1io2 by Molmil
Crystal structure of type 2 ribonuclease h from hyperthermophilic archaeon, thermococcus kodakaraensis kod1
Descriptor: RIBONUCLEASE HII
Authors:Muroya, A, Tsuchiya, D, Ishikawa, M, Haruki, M, Morikawa, M.
Deposit date:2000-12-28
Release date:2001-04-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Catalytic center of an archaeal type 2 ribonuclease H as revealed by X-ray crystallographic and mutational analyses.
Protein Sci., 10, 2001
1SMI
DownloadVisualize
BU of 1smi by Molmil
A single mutation of P450 BM3 induces the conformational rearrangement seen upon substrate-binding in wild-type enzyme
Descriptor: Bifunctional P-450:NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Joyce, M.G, Girvan, H.M, Munro, A.W, Leys, D.
Deposit date:2004-03-09
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Single Mutation in Cytochrome P450 BM3 Induces the Conformational Rearrangement Seen upon Substrate Binding in the Wild-type Enzyme
J.Biol.Chem., 279, 2004
2AXF
DownloadVisualize
BU of 2axf by Molmil
The Immunogenicity of a Viral Cytotoxic T Cell Epitope is controlled by its MHC-bound Conformation
Descriptor: 10-mer peptide from BZLF1 trans-activator protein, ACETIC ACID, Beta-2-microglobulin, ...
Authors:Tynan, F.E, Elhassen, D, Purcell, A.W, Burrows, J.M, Borg, N.A, Miles, J.J, Williamson, N.A, Green, K.J, Tellam, J, Kjer-Nielsen, L, McCluskey, J, Rossjohn, J, Burrows, S.R.
Deposit date:2005-09-05
Release date:2005-11-29
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The immunogenicity of a viral cytotoxic T cell epitope is controlled by its MHC-bound conformation
J.Exp.Med., 202, 2005
1SR4
DownloadVisualize
BU of 1sr4 by Molmil
Crystal Structure of the Haemophilus ducreyi cytolethal distending toxin
Descriptor: BROMIDE ION, Cytolethal distending toxin subunit A, cytolethal distending toxin protein B, ...
Authors:Nesic, D, Hsu, Y, Stebbins, C.E.
Deposit date:2004-03-22
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Assembly and Function of a Bacterial Genotoxin
Nature, 429, 2004
2B07
DownloadVisualize
BU of 2b07 by Molmil
Crystal structure of PTP1B with Tricyclic Thiophene inhibitor.
Descriptor: 6-{[1-(BENZYLSULFONYL)PIPERIDIN-4-YL]AMINO}-3-(CARBOXYMETHOXY)THIENO[3,2-B][1]BENZOTHIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase, non-receptor type 1
Authors:Moretto, A.F, Kirincich, S.J, Xu, W.X, Smith, M.J, Wan, Z.K, Wilson, D.P, Follows, B.C, Binnun, E, Joseph-McCarthy, D, Foreman, K, Erbe, D.V, Zhang, Y.L, Tam, S.K, Tam, S.Y, Lee, J.
Deposit date:2005-09-13
Release date:2005-12-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bicyclic and tricyclic thiophenes as protein tyrosine phosphatase 1B inhibitors.
Bioorg.Med.Chem., 14, 2006
2B20
DownloadVisualize
BU of 2b20 by Molmil
Crystal Structure of Enterochelin Esterase from Shigella flexneri Enterochelin Esterase
Descriptor: L(+)-TARTARIC ACID, enterochelin esterase
Authors:Kim, Y, Maltseva, N, Dementieva, I, Quartey, P, Holzle, D, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-09-16
Release date:2005-11-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure of Enterochelin Esterase from Shigella flexneri Enterochelin Esterase
To be Published
1SMJ
DownloadVisualize
BU of 1smj by Molmil
Structure of the A264E mutant of cytochrome P450 BM3 complexed with palmitoleate
Descriptor: Bifunctional P-450:NADPH-P450 reductase, PALMITOLEIC ACID, PROTOPORPHYRIN IX CONTAINING FE
Authors:Joyce, M.G, Girvan, H.M, Munro, A.W, Leys, D.
Deposit date:2004-03-09
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Single Mutation in Cytochrome P450 BM3 Induces the Conformational Rearrangement Seen upon Substrate Binding in the Wild-type Enzyme
J.Biol.Chem., 279, 2004
2B3O
DownloadVisualize
BU of 2b3o by Molmil
Crystal structure of human tyrosine phosphatase SHP-1
Descriptor: Tyrosine-protein phosphatase, non-receptor type 6
Authors:Yang, J, Liu, L, He, D, Song, X, Liang, X, Zhao, Z.J, Zhou, G.W.
Deposit date:2005-09-20
Release date:2005-10-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human protein-tyrosine phosphatase SHP-1.
J.Biol.Chem., 278, 2003
4KL1
DownloadVisualize
BU of 4kl1 by Molmil
HCN4 CNBD in complex with cGMP
Descriptor: ACETATE ION, CYCLIC GUANOSINE MONOPHOSPHATE, GLYCEROL, ...
Authors:Lolicato, M, Arrigoni, C, Zucca, S, Nardini, M, Bucchi, A, Schroeder, I, Simmons, K, Bolognesi, M, DiFrancesco, D, Schwede, F, Fishwick, C.W.G, Johnson, A.P.K, Thiel, G, Moroni, A.
Deposit date:2013-05-07
Release date:2014-04-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cyclic dinucleotides bind the C-linker of HCN4 to control channel cAMP responsiveness.
Nat.Chem.Biol., 10, 2014
2B5O
DownloadVisualize
BU of 2b5o by Molmil
ferredoxin-NADP reductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, SULFATE ION
Authors:Sawaya, M.R, Kerfeld, C.A, Gomez-Lojero, C, Krogmann, D, Bryant, D.A, Yeates, T.O.
Deposit date:2005-09-29
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal Structure of Ferredoxin-NADP reductase from Synechococcus sp. (PCC 7002)
To be Published
1SGW
DownloadVisualize
BU of 1sgw by Molmil
Putative ABC transporter (ATP-binding protein) from Pyrococcus furiosus Pfu-867808-001
Descriptor: CHLORIDE ION, SODIUM ION, putative ABC transporter
Authors:Liu, Z.J, Tempel, W, Shah, A, Chen, L, Lee, D, Kelley, L.-L.C, Dillard, B.D, Rose, J.P, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.S, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Richardson, D.C, Richardson, J.S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-02-24
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Putative ABC transporter (ATP-binding protein) from Pyrococcus furiosus Pfu-867808-001
To be Published
1IIZ
DownloadVisualize
BU of 1iiz by Molmil
Crystal Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta
Descriptor: LYSOZYME
Authors:Jain, D, Nair, D.T, Swaminathan, G.J, Abraham, E.G, Nagaraju, J, Salunke, D.M.
Deposit date:2001-04-24
Release date:2001-12-12
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the induced antibacterial protein from tasar silkworm, Antheraea mylitta. Implications to molecular evolution.
J.Biol.Chem., 276, 2001
2AZ3
DownloadVisualize
BU of 2az3 by Molmil
Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum in complex with CDP
Descriptor: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Besir, H, Zeth, K, Bracher, A, Heider, U, Ishibashi, M, Tokunaga, M, Oesterhelt, D.
Deposit date:2005-09-09
Release date:2005-12-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum
Febs Lett., 579, 2005
1WMA
DownloadVisualize
BU of 1wma by Molmil
Crystal structure of human CBR1 in complex with Hydroxy-PP
Descriptor: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 3-(4-AMINO-1-TERT-BUTYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-3-YL)PHENOL, ...
Authors:Rauh, D, Bateman, R, Shokat, K.M.
Deposit date:2004-07-06
Release date:2005-04-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:An unbiased cell morphology-based screen for new, biologically active small molecules
Plos Biol., 3, 2005
3UMK
DownloadVisualize
BU of 3umk by Molmil
X-ray structure of the E2 domain of the human amyloid precursor protein (APP) in complex with copper
Descriptor: ACETATE ION, Amyloid beta A4 protein, CADMIUM ION, ...
Authors:Dahms, S.O, Konnig, I, Roeser, D, Guhrs, K.H, Than, M.E.
Deposit date:2011-11-13
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Metal Binding Dictates Conformation and Function of the Amyloid Precursor Protein (APP) E2 Domain.
J.Mol.Biol., 416, 2012
2AH1
DownloadVisualize
BU of 2ah1 by Molmil
Crystal structure of aromatic amine dehydrogenase (AADH) from Alcaligenes faecalis
Descriptor: Aromatic amine dehydrogenase
Authors:Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
Deposit date:2005-07-27
Release date:2006-04-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AII
DownloadVisualize
BU of 2aii by Molmil
wild-type Formylglycine generating enzyme reacted with iodoacetamide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETAMIDE, CALCIUM ION, ...
Authors:Roeser, D, Rudolph, M.G.
Deposit date:2005-07-29
Release date:2005-12-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:A general binding mechanism for all human sulfatases by the formylglycine-generating enzyme
Proc.Natl.Acad.Sci.Usa, 103, 2006

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon