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PDB: 22488 results

5KPE
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BU of 5kpe by Molmil
Solution NMR Structure of Denovo Beta Sheet Design Protein, Northeast Structural Genomics Consortium (NESG) Target OR664
Descriptor: De novo Beta Sheet Design Protein OR664
Authors:Tang, Y, Liu, G, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2016-07-03
Release date:2016-09-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Principles for designing proteins with cavities formed by curved beta sheets.
Science, 355, 2017
6FWE
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BU of 6fwe by Molmil
Phosphotriesterase PTE_C23_6
Descriptor: 1-[methoxy(methyl)phosphoryl]oxyethane, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ...
Authors:Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J.
Deposit date:2018-03-06
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.774 Å)
Cite:Phosphotriesterase PTE_C23_6
To Be Published
8PNE
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BU of 8pne by Molmil
E.coli YihX Wild Type Apo
Descriptor: Alpha-D-glucose 1-phosphate phosphatase YihX, CALCIUM ION, CHLORIDE ION, ...
Authors:Zappala, D, Baumann, P, Jin, Y.
Deposit date:2023-06-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Apo structure of E.coli YihX Wild Type
To Be Published
2M27
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BU of 2m27 by Molmil
Major G-quadruplex structure formed in human VEGF promoter, a monomeric parallel-stranded quadruplex
Descriptor: DNA_(5'-D(*CP*GP*GP*GP*GP*CP*GP*GP*GP*CP*CP*TP*TP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')_
Authors:Agrawal, P, Hatzakis, E, Guo, K, Carver, M, Yang, D.
Deposit date:2012-12-14
Release date:2013-09-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the major G-quadruplex formed in the human VEGF promoter in K+: insights into loop interactions of the parallel G-quadruplexes.
Nucleic Acids Res., 41, 2013
6GDS
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BU of 6gds by Molmil
Holliday Junctions formed from Telomeric DNA
Descriptor: Telomeric DNA (5' CTAACCCTAA) 10mer, Telomeric DNA (5'-TTAGGGTTAG)-3') 10mer
Authors:Parkinson, G.N, Haider, S, Li, P, Khiali, S, Munnur, D, Ramanathan, A.
Deposit date:2018-04-24
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Holliday Junctions Formed from Human Telomeric DNA.
J. Am. Chem. Soc., 140, 2018
6G8Z
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BU of 6g8z by Molmil
Structure of the pore domain of homomeric mLRRC8A volume-regulated anion channel at 3.66 A resolution
Descriptor: Volume-regulated anion channel subunit LRRC8A
Authors:Sawicka, M, Deneka, D, Lam, A.K.M, Paulino, C, Dutzler, R.
Deposit date:2018-04-10
Release date:2018-05-16
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structure of a volume-regulated anion channel of the LRRC8 family.
Nature, 558, 2018
1P2L
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BU of 1p2l by Molmil
T4 Lysozyme Core Repacking Mutant V87I/TA
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME, ...
Authors:Mooers, B.H, Datta, D, Baase, W.A, Zollars, E.S, Mayo, S.L, Matthews, B.W.
Deposit date:2003-04-15
Release date:2003-10-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Repacking the Core of T4 lysozyme by automated design
J.Mol.Biol., 332, 2003
1OKD
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BU of 1okd by Molmil
NMR-structure of tryparedoxin 1
Descriptor: TRYPAREDOXIN 1
Authors:Krumme, D, Budde, H, Hecht, H.-J, Menge, U, Ohlenschlager, O, Ross, A, Wissing, J, Wray, V, Flohe, L.
Deposit date:2003-07-22
Release date:2003-08-28
Last modified:2018-01-17
Method:SOLUTION NMR
Cite:NMR studies of the interaction of tryparedoxin with redox-inactive substrate homologues.
Biochemistry, 42, 2003
8PNO
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BU of 8pno by Molmil
The MgF3(H2O) transition state analog complex of E. coli YihX
Descriptor: 1,2-ETHANEDIOL, Alpha-D-glucose 1-phosphate phosphatase YihX, CALCIUM ION, ...
Authors:Baumann, P, Zappala, D, Jin, Y.
Deposit date:2023-06-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The MgF3(H2O)- transition state analog complex of E. coli YihX
To Be Published
2MA7
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BU of 2ma7 by Molmil
Solution NMR Structure of Zinc finger protein Eos from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7992A
Descriptor: ZINC ION, Zinc finger protein Eos
Authors:Pulavarti, S.V, Mills, J.L, Wang, D, Jigabm, E, Hamilton, K, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-28
Release date:2013-09-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of Zinc finger protein Eos from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7992A
To be Published
3HOW
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BU of 3how by Molmil
Complete RNA polymerase II elongation complex III with a T-U mismatch and a frayed RNA 3'-uridine
Descriptor: 5'-D(*AP*CP*TP*AP*CP*TP*TP*GP*AP*GP*CP*T)-3', 5'-D(*AP*GP*CP*TP*C*AP*AP*GP*TP*AP*GP*TP*TP*AP*TP*GP*CP*CP*(BRU)P*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*UP*GP*CP*AP*UP*UP*U*CP*AP*AP*CP*CP*AP*GP*GP*CP*UP*U)-3', ...
Authors:Sydow, J.F, Brueckner, F, Cheung, A.C.M, Damsma, G.E, Dengl, S, Lehmann, E, Vassylyev, D, Cramer, P.
Deposit date:2009-06-03
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
Mol.Cell, 34, 2009
6G6M
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BU of 6g6m by Molmil
Crystal structure of the computationally designed Tako8 protein in P42212
Descriptor: SULFATE ION, Tako8
Authors:Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
2MAZ
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BU of 2maz by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for Bovine Apo Calbindin
Descriptor: Protein S100-G
Authors:Raikwal, N, Kumar, D.
Deposit date:2013-07-22
Release date:2013-08-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Prot3DNMR: A Simple and Swift NMR Strategy for Three-Dimensional Structure Determination of Proteins
To be Published
2MH5
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BU of 2mh5 by Molmil
Structure and NMR assignments of lantibiotic NAI-107 in DPC micelles
Descriptor: Lantibiotic 107891, dodecyl 2-(trimethylammonio)ethyl phosphate
Authors:Munch, D, Muller, A, Schneider, T, Kohl, B, Wenzel, M, Bandow, J, Maffioli, S, Sosio, M, Donadio, S, Wimmer, R, Sahl, H.
Deposit date:2013-11-18
Release date:2014-03-05
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:The Lantibiotic NAI-107 Binds to Bactoprenol-bound Cell Wall Precursors and Impairs Membrane Functions.
J.Biol.Chem., 289, 2014
6G6Q
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BU of 6g6q by Molmil
Crystal structure of the computationally designed Ika4 protein
Descriptor: Ika4
Authors:Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
1OGK
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BU of 1ogk by Molmil
The crystal structure of Trypanosoma cruzi dUTPase in complex with dUDP
Descriptor: DEOXYURIDINE TRIPHOSPHATASE, DEOXYURIDINE-5'-DIPHOSPHATE
Authors:Harkiolaki, M, Dodson, E.J, Bernier-Villamor, V, Turkenburg, J.P, Gonzalez-Pacanowska, D, Wilson, K.S.
Deposit date:2003-05-07
Release date:2004-01-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The Crystal Structure of Trypanosoma Cruzi Dutpase Reveals a Novel Dutp/Dudp Binding Fold
Structure, 12, 2004
6FP0
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BU of 6fp0 by Molmil
The crystal structure of P.fluorescens Kynurenine 3-monooxygenase (KMO) in complex with competitive inhibitor No. 4
Descriptor: (2~{R})-2-[[(2~{R})-5-chloranyl-1-methyl-2,3-dihydroindol-2-yl]carbonylamino]-2-cyclohexyl-ethanoic acid, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Levy, C.W, Leys, D.
Deposit date:2018-02-08
Release date:2019-08-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A brain-permeable inhibitor of the neurodegenerative disease target kynurenine 3-monooxygenase prevents accumulation of neurotoxic metabolites.
Commun Biol, 2, 2019
1OGL
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BU of 1ogl by Molmil
The crystal structure of native Trypanosoma cruzi dUTPase
Descriptor: DEOXYURIDINE TRIPHOSPHATASE
Authors:Harkiolaki, M, Dodson, E.J, Bernier-Villamor, V, Turkenburg, J.P, Gonzalez-Pacanowska, D, Wilson, K.S.
Deposit date:2003-05-07
Release date:2004-01-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Crystal Structure of Trypanosoma Cruzi Dutpase Reveals a Novel Dutp/Dudp Binding Fold
Structure, 12, 2004
8PIU
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BU of 8piu by Molmil
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
Authors:Zdanowicz, R, Afanasyev, P, Boehringer, D, Glockshuber, R.
Deposit date:2023-06-22
Release date:2024-07-10
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Stoichiometry and architecture of the human pyruvate dehydrogenase complex.
Sci Adv, 10, 2024
6FPT
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BU of 6fpt by Molmil
Crystal structure of Danio rerio Lin41 filamin-NHL domains
Descriptor: E3 ubiquitin-protein ligase TRIM71
Authors:Kumari, P, Aeschimann, F, Gaidatzis, D, Keusch, J.J, Ghosh, P, Neagu, A, Pachulska-Wieczorek, K, Bujnicki, J.M, Gut, H, Grosshans, H, Ciosk, R.
Deposit date:2018-02-12
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition.
Nat Commun, 9, 2018
1OHD
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BU of 1ohd by Molmil
structure of cdc14 in complex with tungstate
Descriptor: CDC14B2 PHOSPHATASE, TUNGSTATE(VI)ION
Authors:Gray, C.H, Good, V.M, Tonks, N.K, Barford, D.
Deposit date:2003-05-24
Release date:2003-07-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structure of the Cell Cycle Protein Cdc14 Reveals a Proline-Directed Protein Phosphatase
Embo J., 22, 2003
6FQL
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BU of 6fql by Molmil
Crystal structure of Danio rerio Lin41 filamin-NHL domains in complex with mab-10 3'UTR 13mer RNA
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase TRIM71, RNA (5'-R(*UP*GP*CP*AP*UP*UP*UP*AP*AP*UP*GP*CP*A)-3')
Authors:Kumari, P, Aeschimann, F, Gaidatzis, D, Keusch, J.J, Ghosh, P, Neagu, A, Pachulska-Wieczorek, K, Bujnicki, J.M, Gut, H, Grosshans, H, Ciosk, R.
Deposit date:2018-02-14
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition.
Nat Commun, 9, 2018
5LDG
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BU of 5ldg by Molmil
Isopiperitenone reductase from Mentha piperita in complex with Isopiperitenone and NADP
Descriptor: (-)-Isopiperitenone, (-)-isopiperitenone reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Karuppiah, V, Toogood, H.S, Leys, D, Scrutton, N.S.
Deposit date:2016-06-26
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Pinpointing a Mechanistic Switch Between Ketoreduction and "Ene" Reduction in Short-Chain Dehydrogenases/Reductases.
Angew.Chem.Int.Ed.Engl., 55, 2016
1OLT
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BU of 1olt by Molmil
Coproporphyrinogen III oxidase (HemN) from Escherichia coli is a Radical SAM enzyme.
Descriptor: IRON/SULFUR CLUSTER, OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE, S-ADENOSYLMETHIONINE
Authors:Layer, G, Moser, J, Heinz, D.W, Jahn, D, Schubert, W.-D.
Deposit date:2003-08-13
Release date:2003-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal Structure of Coproporphyrinogen III Oxidase Reveals Cofactor Geometry of Radical Sam Enzymes
Embo J., 22, 2003
5LFA
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BU of 5lfa by Molmil
Crystal structure of iron-sulfur cluster containing bacterial (6-4) photolyase PhrB - Y424F mutant with impaired DNA repair activity
Descriptor: (6-4) photolyase, 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kwiatkowski, D, Zhang, F, Krauss, N, Lamparter, T, Scheerer, P.
Deposit date:2016-06-30
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of Bacterial (6-4) Photolyase Mutants with Impaired DNA Repair Activity.
Photochem. Photobiol., 93, 2017

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