Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22488 件

4RGE
DownloadVisualize
BU of 4rge by Molmil
Crystal structure of the in-line aligned env22 twister ribozyme
分子名称: MAGNESIUM ION, env22 twister ribozyme
著者Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D.
登録日2014-09-30
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
8D03
DownloadVisualize
BU of 8d03 by Molmil
Hallucinated C2 protein assembly HALC2_068
分子名称: HALC2_068
著者Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D.
登録日2022-05-25
公開日2022-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Hallucinating symmetric protein assemblies.
Science, 378, 2022
4RJE
DownloadVisualize
BU of 4rje by Molmil
Aerococcus viridans L-lactate oxidase mutant
分子名称: 1,2-ETHANEDIOL, 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, Lactate oxidase, ...
著者Rainer, D, Nidetzky, B, Wilson, D.K.
登録日2014-10-08
公開日2014-12-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Ala95-to-Gly substitution in Aerococcus viridans l-lactate oxidase revisited - structural consequences at the catalytic site and effect on reactivity with O2 and other electron acceptors.
Febs J., 282, 2015
4NE5
DownloadVisualize
BU of 4ne5 by Molmil
Human MHF1-MHF2 complex
分子名称: Centromere protein S, Centromere protein X
著者Zhao, Q, Saro, D, Sachpatzidis, A, Sung, P, Xiong, Y.
登録日2013-10-28
公開日2013-12-25
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
Nat Commun, 5, 2014
4RGA
DownloadVisualize
BU of 4rga by Molmil
Phage 1358 receptor binding protein in complex with the trisaccharide GlcNAc-Galf-GlcOMe
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-galactofuranose-(1-6)-methyl alpha-D-glucopyranoside, Phage 1358 receptor binding protein (ORF20)
著者Spinelli, S, Mccabe, O, Farenc, C, Tremblay, D, Blangy, S, Oscarson, S, Moineau, S, Cambillau, C.
登録日2014-09-29
公開日2015-05-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The targeted recognition of Lactococcus lactis phages to their polysaccharide receptors.
Mol.Microbiol., 96, 2015
5VHJ
DownloadVisualize
BU of 5vhj by Molmil
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
分子名称: 26S proteasome non-ATPase regulatory subunit 10, 26S proteasome non-ATPase regulatory subunit 2, 26S proteasome regulatory subunit 10B, ...
著者Lu, Y, Wu, J, Dong, Y, Chen, S, Sun, S, Ma, Y.B, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
登録日2017-04-13
公開日2017-08-23
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
1M9G
DownloadVisualize
BU of 1m9g by Molmil
Solution structure of G16A-MNEI, a structural mutant of single chain monellin MNEI
分子名称: Monellin chain B and Monellin chain A
著者Spadaccini, R, Trabucco, F, Saviano, G, Picone, D, Crescenzi, O, Tancredi, T, Temussi, P.A.
登録日2002-07-29
公開日2003-06-10
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The Mechanism of Interaction of Sweet Proteins with the T1R2-T1R3 Receptor: Evidence from the Solution Structure of G16A-MNEI
J.MOL.BIOL., 328, 2003
5VFR
DownloadVisualize
BU of 5vfr by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VHQ
DownloadVisualize
BU of 5vhq by Molmil
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
分子名称: 26S proteasome non-ATPase regulatory subunit 10, 26S proteasome non-ATPase regulatory subunit 2, 26S proteasome regulatory subunit 10B, ...
著者Lu, Y, Wu, J, Dong, Y, Chen, S, Sun, S, Ma, Y.B, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
登録日2017-04-13
公開日2017-08-23
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
1MBU
DownloadVisualize
BU of 1mbu by Molmil
Crystal Structure Analysis of ClpSN heterodimer
分子名称: ATP-Dependent clp Protease ATP-Binding Subunit clp A, BIS-(2-HYDROXYETHYL)AMINO-TRIS(HYDROXYMETHYL)METHANE YTTRIUM, CHLORIDE ION, ...
著者Guo, F, Esser, L, Singh, S.K, Maurizi, M.R, Xia, D.
登録日2002-08-03
公開日2002-12-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the Heterodimeric Complex of the Adaptor, ClpS, with the N-domain of the AAA+ Chaperone, ClpA
J.Biol.Chem., 277, 2002
4RH8
DownloadVisualize
BU of 4rh8 by Molmil
Crystal structure of the outer membrane lipopolysaccharide transport protein LptE (RlpB) from Escherichia coli in the tetragonal crystal form
分子名称: FORMIC ACID, LPS-assembly lipoprotein LptE
著者Malojcic, G, Kahne, D.
登録日2014-10-01
公開日2015-11-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of lipopolysaccharide insertion into the bacterial outer membrane
To be Published
4RHB
DownloadVisualize
BU of 4rhb by Molmil
Crystal structure of the lipopolysaccharide assembly complex LptD-LptE from the Escherichia coli outer membrane
分子名称: CHLORIDE ION, LPS-assembly lipoprotein LptE, LPS-assembly protein LptD, ...
著者Malojcic, G, Garner, R.A, Kahne, D.
登録日2014-10-01
公開日2015-08-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.355 Å)
主引用文献Structural basis of lipopolysaccharide insertion into the bacterial outer membrane
To be Published
7QZA
DownloadVisualize
BU of 7qza by Molmil
Crystal structure of a DyP-type peroxidase 29E4 variant from Pseudomonas putida
分子名称: Dyp-type peroxidase family protein, PROTOPORPHYRIN IX CONTAINING FE
著者Borges, P.T, Silva, D, Frazao, C, Martins, L.O.
登録日2022-01-30
公開日2022-08-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.698 Å)
主引用文献Unveiling molecular details behind improved activity at neutral to alkaline pH of an engineered DyP-type peroxidase.
Comput Struct Biotechnol J, 20, 2022
1MG4
DownloadVisualize
BU of 1mg4 by Molmil
STRUCTURE OF N-TERMINAL DOUBLECORTIN DOMAIN FROM DCLK: WILD TYPE PROTEIN
分子名称: DOUBLECORTIN-LIKE KINASE (N-TERMINAL DOMAIN), SULFATE ION
著者Kim, M.H, Cierpickil, T, Derewenda, U, Krowarsch, D, Feng, Y, Devedjiev, Y, Dauter, Z, Walsh, C.A, Otlewski, J, Bushweller, J.H, Derewenda, Z.
登録日2002-08-14
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.504 Å)
主引用文献The DCX-domain Tandems of Doublecortin and Doublecortin-like Kinase
Nat.Struct.Biol., 10, 2003
5VPV
DownloadVisualize
BU of 5vpv by Molmil
Crystal structure of Apo Cryptococcus neoformans H99 Acetyl-CoA Synthetase with an Acetylated Active Site Lysine
分子名称: Acetyl-coenzyme A synthetase, GLYCEROL, PHOSPHATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID), Fox III, D, Davies, D.R, Calhoun, B.
登録日2017-05-05
公開日2017-05-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Apo Cryptococcus neoformans H99 Acetyl-CoA Synthetase with an Acetylated Active Site Lysine
to be published
8D3A
DownloadVisualize
BU of 8d3a by Molmil
Crystal Structure of DH475 Fab in complex with Man9
分子名称: DH475 Fab heavy chain, DH475 Fab light chain, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Finkelstein, M, Fera, D.
登録日2022-06-01
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Analysis of two cooperating antibodies unveils immune pressure imposed on HIV Env to elicit a V3-glycan supersite broadly neutralizing antibody lineage.
Front Immunol, 13, 2022
5VRK
DownloadVisualize
BU of 5vrk by Molmil
Crystal structure of SsoPox AsA6 mutant (F46L-C258A-W263M-I280T) - open form
分子名称: 1,2-ETHANEDIOL, Aryldialkylphosphatase, COBALT (II) ION, ...
著者Hiblot, J, Gotthard, G, Jacquet, P, Daude, D, Bergonzi, C, Chabriere, E, Elias, M.
登録日2017-05-10
公開日2018-01-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase.
Sci Rep, 7, 2017
7RMY
DownloadVisualize
BU of 7rmy by Molmil
De Novo designed tunable protein pockets, D_3-337
分子名称: De Novo designed tunable homodimer, D_3-337
著者Bera, A.K, Hicks, D.R, Kang, A, Sankaran, B, Baker, D.
登録日2021-07-28
公開日2022-08-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献De novo design of protein homodimers containing tunable symmetric protein pockets.
Proc.Natl.Acad.Sci.USA, 119, 2022
4RHW
DownloadVisualize
BU of 4rhw by Molmil
Crystal structure of Apaf-1 CARD and caspase-9 CARD complex
分子名称: Apoptotic protease-activating factor 1, CHLORIDE ION, Caspase-9, ...
著者Hu, Q, Wu, D, Yan, C, Shi, Y.
登録日2014-10-03
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular determinants of caspase-9 activation by the Apaf-1 apoptosome.
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
4RHT
DownloadVisualize
BU of 4rht by Molmil
Crystal structures of Mycobacterium tuberculosis 6-oxopurine phosphoribosyltransferase which is a potential target for drug development against this disease
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Hypoxanthine-guanine phosphoribosyltransferase Hpt, MAGNESIUM ION, ...
著者Eng, W.S, Hockova, D, Spacek, P, West, N.P, Woods, K, Naesens, L.M.J, Keough, D.T, Guddat, L.W.
登録日2014-10-03
公開日2015-05-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7633 Å)
主引用文献First Crystal Structures of Mycobacterium tuberculosis 6-Oxopurine Phosphoribosyltransferase: Complexes with GMP and Pyrophosphate and with Acyclic Nucleoside Phosphonates Whose Prodrugs Have Antituberculosis Activity.
J.Med.Chem., 58, 2015
7RMX
DownloadVisualize
BU of 7rmx by Molmil
Structure of De Novo designed tunable symmetric protein pockets
分子名称: Tunable symmetric protein, D_3_212
著者Bera, A.K, Hicks, D.R, Kang, A, Sankaran, B, Baker, D.
登録日2021-07-28
公開日2022-08-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献De novo design of protein homodimers containing tunable symmetric protein pockets.
Proc.Natl.Acad.Sci.USA, 119, 2022
7QYZ
DownloadVisualize
BU of 7qyz by Molmil
Crystal structure of a DyP-type peroxidase 6E10 variant from Pseudomonas putida
分子名称: Dyp-type peroxidase family protein, PROTOPORPHYRIN IX CONTAINING FE
著者Borges, P.T, Silva, D, Martins, L.O, Frazao, C.
登録日2022-01-30
公開日2022-08-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.452 Å)
主引用文献Unveiling molecular details behind improved activity at neutral to alkaline pH of an engineered DyP-type peroxidase.
Comput Struct Biotechnol J, 20, 2022
4RHY
DownloadVisualize
BU of 4rhy by Molmil
Crystal structures of Mycobacterium tuberculosis 6-oxopurine phosphoribosyltransferase which is a potential target for drug development against this disease
分子名称: Hypoxanthine-guanine phosphoribosyltransferase, MAGNESIUM ION, [2-({2-[bis(2-phosphonoethyl)amino]ethyl}[2-(6-oxo-3,6-dihydro-9H-purin-9-yl)ethyl]amino)ethyl]phosphonic acid
著者Eng, W.S, Hockova, D, Spacek, P, West, N.P, Woods, K, Naesens, L.M.J, Keough, D.T, Guddat, L.W.
登録日2014-10-03
公開日2015-05-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3196 Å)
主引用文献First Crystal Structures of Mycobacterium tuberculosis 6-Oxopurine Phosphoribosyltransferase: Complexes with GMP and Pyrophosphate and with Acyclic Nucleoside Phosphonates Whose Prodrugs Have Antituberculosis Activity.
J.Med.Chem., 58, 2015
4RHX
DownloadVisualize
BU of 4rhx by Molmil
Structures of Mycobacterium tuberculosis 6-oxopurine phosphoribosyltransferase which is a potential target for drug development against this disease
分子名称: Hypoxanthine-guanine phosphoribosyltransferase, MAGNESIUM ION, [2-([2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)ethyl]{2-[(2-oxoethyl)(2-phosphonoethyl)amino]ethyl}amino)ethyl]phosphonic acid
著者Eng, W.S, Hockova, D, Spacek, P, West, N.P, Woods, K, Naesens, L.M.J, Keough, D.T, Guddat, L.W.
登録日2014-10-03
公開日2015-05-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.0322 Å)
主引用文献First Crystal Structures of Mycobacterium tuberculosis 6-Oxopurine Phosphoribosyltransferase: Complexes with GMP and Pyrophosphate and with Acyclic Nucleoside Phosphonates Whose Prodrugs Have Antituberculosis Activity.
J.Med.Chem., 58, 2015
4RHU
DownloadVisualize
BU of 4rhu by Molmil
Crystal structures of Mycobacterium tuberculosis 6-oxopurine phosphoribosyltransferase which is a potential target for drug development against this disease
分子名称: Hypoxanthine-guanine phosphoribosyltransferase Hpt, MAGNESIUM ION, {[(2R)-3-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)propane-1,2-diyl]bis(oxyethane-2,1-diyl)}bis(phosphonic acid), ...
著者Eng, W.S, Hockova, D, Spacek, P, West, N.P, Woods, K, Naesens, L.M.J, Keough, D.T, Guddat, L.W.
登録日2014-10-03
公開日2015-05-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.573 Å)
主引用文献First Crystal Structures of Mycobacterium tuberculosis 6-Oxopurine Phosphoribosyltransferase: Complexes with GMP and Pyrophosphate and with Acyclic Nucleoside Phosphonates Whose Prodrugs Have Antituberculosis Activity.
J.Med.Chem., 58, 2015

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon