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PDB: 22488 results

2M5T
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Solution structure of the 2A proteinase from a common cold agent, human rhinovirus RV-C02, strain W12
Descriptor: ZINC ION, human rhinovirus 2A proteinase
Authors:Lee, W, Frederick, R, Tonelli, M, Troupis, A.T, Reinin, N, Suchy, F.P, Moyer, K, Watters, K, Aceti, D, Palmenberg, A.C, Markley, J.L.
Deposit date:2013-03-07
Release date:2014-03-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the 2A Protease from a Common Cold Agent, Human Rhinovirus C2, Strain W12.
Plos One, 9, 2014
3I3E
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BU of 3i3e by Molmil
E. COLI (lacZ) BETA-GALACTOSIDASE (M542A)
Descriptor: Beta-galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Dugdale, M.L, Dymianiw, D, Minhas, B, Huber, R.E.
Deposit date:2009-06-30
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Role of Met-542 as a guide for the conformational changes of Phe-601 that occur during the reaction of β-galactosidase (Escherichia coli).
Biochem.Cell Biol., 88, 2010
2LUZ
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Solution NMR Structure of CalU16 from Micromonospora echinospora, Northeast Structural Genomics Consortium (NESG) Target MiR12
Descriptor: CalU16
Authors:Ramelot, T.A, Yang, Y, Lee, H, Pederson, K, Lee, D, Kohan, E, Janjua, H, Xiao, R, Acton, T.B, Everett, J.K, Wrobel, R.L, Bingman, C.A, Singh, S, Thorson, J.S, Prestegard, J.H, Montelione, G.T, Phillips Jr, G.N, Kennedy, M.A, Enzyme Discovery for Natural Product Biosynthesis (NatPro), Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-06-22
Release date:2012-10-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure-Guided Functional Characterization of Enediyne Self-Sacrifice Resistance Proteins, CalU16 and CalU19.
Acs Chem.Biol., 9, 2014
2MBC
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Solution Structure of human holo-PRL-3 in complex with vanadate
Descriptor: Protein tyrosine phosphatase type IVA 3
Authors:Jeong, K, Kang, D, Kim, J, Shin, S, Jin, B, Lee, C, Kim, E, Jeon, Y.H, Kim, Y.
Deposit date:2013-07-29
Release date:2013-10-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and backbone dynamics of vanadate-bound PRL-3: comparison of 15N nuclear magnetic resonance relaxation profiles of free and vanadate-bound PRL-3.
Biochemistry, 53, 2014
2M8G
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Structure, function, and tethering of DNA-binding domains in 54 transcriptional activators
Descriptor: Transcriptional regulator
Authors:Hong, E, Wemmer, D.
Deposit date:2013-05-19
Release date:2013-08-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
2MCZ
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CR1 Sushi domains 1 and 2
Descriptor: Complement receptor type 1
Authors:Park, H.J, Guariento, M.J, Maciejewski, M, Hauart, R, Tham, W, Cowman, A.F, Schmidt, C.Q, Martens, H, Liszewski, K.M, Hourcade, D, Barlow, P.N, Atkinson, J.P.
Deposit date:2013-08-27
Release date:2013-11-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Using Mutagenesis and Structural Biology to Map the Binding Site for the Plasmodium falciparum Merozoite Protein PfRh4 on the Human Immune Adherence Receptor.
J.Biol.Chem., 289, 2014
6PQA
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BU of 6pqa by Molmil
GAVVGG segment 119-124 from human prion
Descriptor: Major prion protein
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2019-07-08
Release date:2020-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core.
Nat.Struct.Mol.Biol., 27, 2020
2MPB
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NMR structure of BA42 protein from the psychrophilic bacteria Bizionia argentinensis sp. nov
Descriptor: BA42
Authors:Cicero, D, Aran, M, Smal, C, Pellizza, L, Gallo, M.
Deposit date:2014-05-14
Release date:2014-08-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution and crystal structure of BA42, a protein from the Antarctic bacterium Bizionia argentinensis comprised of a stand-alone TPM domain.
Proteins, 82, 2014
2N2N
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Tom1 negatively modulates binding of Tollip to phosphatidylinositol 3-phosphate via a coupled folding and binding mechanism
Descriptor: Target of Myb protein 1
Authors:Xiao, S, Armstrong, G, Capelluto, D.
Deposit date:2015-05-11
Release date:2015-09-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Tom1 Modulates Binding of Tollip to Phosphatidylinositol 3-Phosphate via a Coupled Folding and Binding Mechanism.
Structure, 23, 2015
2MRY
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BU of 2mry by Molmil
NMR solution structure of copper binding protein in the apo form
Descriptor: Uncharacterized protein
Authors:Fu, Y, Wu, H, Bruce, K, Giedroc, D.
Deposit date:2014-07-17
Release date:2015-07-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The S2 Cu(i) site in CupA from Streptococcus pneumoniae is required for cellular copper resistance.
Metallomics, 8, 2016
2MT8
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Solution structure MTAbl13, a grafted MCoTI-II
Descriptor: MTAbl13 of grafted MCoTI-II
Authors:Huang, Y, Wang, C, Craik, D.
Deposit date:2014-08-15
Release date:2015-10-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Design of substrate-based BCR-ABL kinase inhibitors using the cyclotide scaffold.
Sci Rep, 5, 2015
2MZN
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BU of 2mzn by Molmil
NMR structure of the HLTF HIRAN domain in its DNA-bound conformation
Descriptor: Helicase-like transcription factor
Authors:Korzhnev, D, Eldirany, S.
Deposit date:2015-02-18
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:HLTF's Ancient HIRAN Domain Binds 3' DNA Ends to Drive Replication Fork Reversal.
Mol.Cell, 58, 2015
2MXS
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BU of 2mxs by Molmil
Solution NMR-structure of the neomycin sensing riboswitch RNA bound to paromomycin
Descriptor: PAROMOMYCIN, RNA (27-MER)
Authors:Schmidtke, S, Duchardt-Ferner, E, Ohlenschlaeger, O, Gottstein, D, Wohnert, J.
Deposit date:2015-01-14
Release date:2015-12-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.
Angew.Chem.Int.Ed.Engl., 55, 2016
3IQY
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BU of 3iqy by Molmil
Active site mutants of B. subtilis SecA
Descriptor: Protein translocase subunit secA, SULFATE ION
Authors:Kim, D, Hunt, J.F.
Deposit date:2009-08-21
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:ATPase Active-Site Electrostatic Interactions Control the Global Conformation of the 100 kDa SecA Translocase.
J.Am.Chem.Soc., 135, 2013
2N0K
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BU of 2n0k by Molmil
Chemical shift assignments and structure of the alpha-crystallin domain from human, HSPB5
Descriptor: Alpha-crystallin B chain
Authors:Rajagopal, P, Klevit, R.E, Shi, L, Baker, D.
Deposit date:2015-03-09
Release date:2015-06-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A conserved histidine modulates HSPB5 structure to trigger chaperone activity in response to stress-related acidosis.
Elife, 4, 2015
2N8E
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Three-dimensional structure of cyclic PVIIA
Descriptor: Kappa-conotoxin PVIIA
Authors:Kwon, S, Schroeder, C, Craik, D.
Deposit date:2015-10-13
Release date:2016-08-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Efficient enzymatic cyclization of an inhibitory cystine knot-containing peptide.
Biotechnol.Bioeng., 113, 2016
2MYH
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BU of 2myh by Molmil
Omega-Tbo-IT1: selective inhibitor of insect calcium channels isolated from Tibellus oblongus spider venom
Descriptor: Omega-Tbo-IT1 toxin
Authors:Altukhov, D, Bozin, T, Bocharov, E, Kozlov, S, Mikov, A.
Deposit date:2015-01-23
Release date:2015-12-09
Method:SOLUTION NMR
Cite:omega-Tbo-IT1-New Inhibitor of Insect Calcium Channels Isolated from Spider Venom.
Sci Rep, 5, 2015
2N1G
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Structure of C-terminal domain of human polymerase Rev1 in complex with PolD3 RIR-motif
Descriptor: DNA polymerase delta subunit 3, DNA repair protein REV1
Authors:Pustovalova, Y, Korzhnev, D.
Deposit date:2015-04-01
Release date:2016-04-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Interaction between the Rev1 C-Terminal Domain and the PolD3 Subunit of Pol zeta Suggests a Mechanism of Polymerase Exchange upon Rev1/Pol zeta-Dependent Translesion Synthesis.
Biochemistry, 55, 2016
3IFW
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BU of 3ifw by Molmil
Crystal structure of the S18Y variant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester.
Descriptor: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase isozyme L1
Authors:Das, C, Boudreaux, D, Maiti, T.
Deposit date:2009-07-26
Release date:2010-06-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ubiquitin vinyl methyl ester binding orients the misaligned active site of the ubiquitin hydrolase UCHL1 into productive conformation.
Proc.Natl.Acad.Sci.USA, 107, 2010
6Q64
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BU of 6q64 by Molmil
BT1044SeMet E190Q
Descriptor: Endoglycosidase
Authors:Basle, A, Paterson, N, Crouch, L, Bolam, D.
Deposit date:2018-12-10
Release date:2019-05-08
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Complex N-glycan breakdown by gut Bacteroides involves an extensive enzymatic apparatus encoded by multiple co-regulated genetic loci.
Nat Microbiol, 4, 2019
2N31
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BU of 2n31 by Molmil
Tom1 negatively modulates binding of Tollip to phosphatidylinositol 3-phosphate via a coupled folding and binding mechanism
Descriptor: Toll interacting protein variant
Authors:Xiao, S, Armstrong, G, Capelluto, D.
Deposit date:2015-05-19
Release date:2015-09-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Tom1 Modulates Binding of Tollip to Phosphatidylinositol 3-Phosphate via a Coupled Folding and Binding Mechanism.
Structure, 23, 2015
2NBI
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BU of 2nbi by Molmil
Structure of the PSCD-region of the cell wall protein pleuralin-1
Descriptor: HEP200 protein
Authors:De Sanctis, S, Wenzler, M, Kroeger, N, Malloni, W.M, Sumper, M, Rainer, D, Zadravec, P, Brunner, E, Kremer, W, Kalbitzer, H.R.
Deposit date:2016-02-23
Release date:2016-12-21
Method:SOLUTION NMR
Cite:PSCD Domains of Pleuralin-1 from the Diatom Cylindrotheca fusiformis: NMR Structures and Interactions with Other Biosilica-Associated Proteins.
Structure, 24, 2016
3ICV
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BU of 3icv by Molmil
Structural Consequences of a Circular Permutation on Lipase B from Candida Antartica
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase B
Authors:Horton, J.R, Qian, Z, Jia, D, Lutz, S, Cheng, X.
Deposit date:2009-07-18
Release date:2009-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural redesign of lipase B from Candida antarctica by circular permutation and incremental truncation.
J.Mol.Biol., 393, 2009
3IFT
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BU of 3ift by Molmil
Crystal structure of glycine cleavage system protein H from Mycobacterium tuberculosis, using X-rays from the Compact Light Source.
Descriptor: Glycine cleavage system H protein
Authors:Edwards, T.E, Abendroth, J, Staker, B, Mayer, C, Phan, I, Kelley, A, Analau, E, Leibly, D, Rifkin, J, Loewen, R, Ruth, R.D, Stewart, L.J, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)
Deposit date:2009-07-25
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure determination of the glycine cleavage system protein H of Mycobacterium tuberculosis using an inverse Compton synchrotron X-ray source.
J.Struct.Funct.Genom., 11, 2010
2N86
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BU of 2n86 by Molmil
NMR structure of OtTx1a - ICK
Descriptor: Spiderine-1a
Authors:Nadezhdin, K, Romanovskaya, D, Sachkova, M, Vassilevski, A, Grishin, E, Kovalchuk, S, Arseniev, A.
Deposit date:2015-10-05
Release date:2016-10-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Modular toxin from the lynx spider Oxyopes takobius: Structure of spiderine domains in solution and membrane-mimicking environment.
Protein Sci., 26, 2017

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