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4X57
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BU of 4x57 by Molmil
Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex
Descriptor: Membrane-anchored ubiquitin-fold protein 3, SULFATE ION, Ubiquitin-conjugating enzyme E2 8
Authors:Korolev, S, Koroleva, O, Lu, X, Downes, B.
Deposit date:2014-12-04
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold ProteinComplex
To Be Published
8G1I
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BU of 8g1i by Molmil
SpCas9 with sgRNA and target DNA
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, DNA E2_NTS, DNA E2_TS, ...
Authors:Korolev, S, Gagnon, K.
Deposit date:2023-02-02
Release date:2023-05-17
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:SpCas9 with sgRNA and target DNA
To Be Published
8FZT
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BU of 8fzt by Molmil
SpCas9 with dual-guide RNA and target DNA
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, CrE2, E2-NTS, ...
Authors:Korolev, S, Gagnon, K.
Deposit date:2023-01-30
Release date:2023-05-31
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:SpCas9 with dual-guide RNA and target DNA
To Be Published
1UAA
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BU of 1uaa by Molmil
E. COLI REP HELICASE/DNA COMPLEX
Descriptor: DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), PROTEIN (ATP-DEPENDENT DNA HELICASE REP.)
Authors:Korolev, S, Waksman, G.
Deposit date:1997-06-30
Release date:1998-07-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP.
Cell(Cambridge,Mass.), 90, 1997
1JQ3
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BU of 1jq3 by Molmil
Crystal Structure of Spermidine Synthase in Complex with Transition State Analogue AdoDATO
Descriptor: S-ADENOSYL-1,8-DIAMINO-3-THIOOCTANE, Spermidine synthase
Authors:Korolev, S, Ikeguchi, Y, Skarina, T, Beasley, S, Edwards, A, Joachimiak, A, Pegg, A.E, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-08-03
Release date:2001-11-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of spermidine synthase with a multisubstrate adduct inhibitor.
Nat.Struct.Biol., 9, 2002
1KXJ
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BU of 1kxj by Molmil
The Crystal Structure of Glutamine Amidotransferase from Thermotoga maritima
Descriptor: Amidotransferase hisH, PHOSPHATE ION
Authors:Korolev, S, Skarina, T, Evdokimova, E, Beasley, S, Edwards, A, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-01-31
Release date:2002-03-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of glutamine amidotransferase from Thermotoga maritima
Proteins, 49, 2002
1INL
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BU of 1inl by Molmil
Crystal Structure of Spermidine Synthase from Thermotoga Maritima
Descriptor: Spermidine synthase
Authors:Korolev, S, Skarina, T, Ikeguchi, Y, Pegg, A.E, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-05-14
Release date:2001-11-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of spermidine synthase with a multisubstrate adduct inhibitor.
Nat.Struct.Biol., 9, 2002
1K6D
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BU of 1k6d by Molmil
CRYSTAL STRUCTURE OF ACETATE COA-TRANSFERASE ALPHA SUBUNIT
Descriptor: ACETATE COA-TRANSFERASE ALPHA SUBUNIT, MAGNESIUM ION
Authors:Korolev, S, Koroleva, O, Petterson, K, Collart, F, Dementieva, I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-10-15
Release date:2002-06-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Autotracing of Escherichia coli acetate CoA-transferase alpha-subunit structure using 3.4 A MAD and 1.9 A native data.
Acta Crystallogr.,Sect.D, 58, 2002
1KTQ
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BU of 1ktq by Molmil
DNA POLYMERASE
Descriptor: DNA POLYMERASE I
Authors:Korolev, S, Waksman, G.
Deposit date:1995-08-16
Release date:1996-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the large fragment of Thermus aquaticus DNA polymerase I at 2.5-A resolution: structural basis for thermostability.
Proc.Natl.Acad.Sci.USA, 92, 1995
1ML8
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BU of 1ml8 by Molmil
structural genomics
Descriptor: hypothetical protein (crp region)
Authors:Korolev, S, Skarina, T, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-08-30
Release date:2003-04-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural genomics
To be Published
7S4A
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BU of 7s4a by Molmil
MRG15 complex with PALB2 peptide
Descriptor: Mortality factor 4-like protein 1, Partner and localizer of BRCA2
Authors:Korolev, S, Deveryshetty, J.
Deposit date:2021-09-08
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Structural Insight into the Mechanism of PALB2 Interaction with MRG15.
Genes (Basel), 12, 2021
3LFU
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BU of 3lfu by Molmil
Crystal Structure of E. coli UvrD
Descriptor: DNA helicase II, SULFATE ION
Authors:Korolev, S, Waksman, G, Lohman, T.M.
Deposit date:2010-01-18
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding.
J.Mol.Biol., 411, 2011
7N94
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BU of 7n94 by Molmil
LINE-1 endonuclease domain complex with DNA
Descriptor: DNA (5'-D(*AP*GP*CP*CP*CP*TP*TP*AP*AP*AP*AP*AP*GP*GP*AP*GP*CP*T)-3'), DNA (5'-D(*GP*CP*TP*CP*CP*TP*TP*TP*TP*TP*AP*AP*GP*GP*GP*CP*TP*A)-3'), LINE-1 retrotransposable element ORF2 protein
Authors:Korolev, S, Miller, I.
Deposit date:2021-06-16
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
7N8K
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BU of 7n8k by Molmil
LINE-1 endonuclease domain complex with Mg
Descriptor: ACETATE ION, LINE-1 retrotransposable element ORF2 protein, MAGNESIUM ION, ...
Authors:Korolev, S, Miller, I.
Deposit date:2021-06-15
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
7N8S
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BU of 7n8s by Molmil
LINE-1 endonuclease domain complex with DNA
Descriptor: DNA (5'-D(*CP*CP*TP*TP*AP*AP*AP*AP*AP*GP*GP*AP*GP*CP*T)-3'), DNA (5'-D(*GP*CP*TP*CP*CP*TP*TP*TP*TP*TP*AP*AP*GP*GP*A)-3'), LINE-1 retrotransposable element ORF2 protein
Authors:Korolev, S, Miller, I.
Deposit date:2021-06-15
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
2O5V
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BU of 2o5v by Molmil
Recombination mediator RecF
Descriptor: DNA replication and repair protein recF, SULFATE ION
Authors:Korolev, S, Koroleva, O.
Deposit date:2006-12-06
Release date:2007-02-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural conservation of RecF and Rad50: implications for DNA recognition and RecF function.
Embo J., 26, 2007
1NPY
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BU of 1npy by Molmil
Structure of shikimate 5-dehydrogenase-like protein HI0607
Descriptor: ACETYL GROUP, Hypothetical shikimate 5-dehydrogenase-like protein HI0607
Authors:Korolev, S, Koroleva, O, Zarembinski, T, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-01-20
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of a Novel Shikimate Dehydrogenase from Haemophilus influenzae.
J.Biol.Chem., 280, 2005
5KTQ
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BU of 5ktq by Molmil
LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO DCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, PROTEIN (DNA POLYMERASE I)
Authors:Li, Y, Kong, Y, Korolev, S, Waksman, G.
Deposit date:1998-09-22
Release date:1998-09-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of the Klenow fragment of Thermus aquaticus DNA polymerase I complexed with deoxyribonucleoside triphosphates.
Protein Sci., 7, 1998
3Q8D
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BU of 3q8d by Molmil
E. coli RecO complex with SSB C-terminus
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, D-MALATE, DNA repair protein recO, ...
Authors:Koroleva, O, Ryzhikov, M, Korolev, S.
Deposit date:2011-01-06
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein.
Nucleic Acids Res., 39, 2011
6AUN
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BU of 6aun by Molmil
calcium-independent phospholipase A2 beta
Descriptor: PLA2G6, iPLA2beta
Authors:Malley, K, Koroleva, O, Miller, I, Sanishvili, R, Jenkins, C.M, Gross, R.W, Korolev, S.
Deposit date:2017-09-01
Release date:2018-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.951 Å)
Cite:The structure of iPLA2beta reveals dimeric active sites and suggests mechanisms of regulation and localization.
Nat Commun, 9, 2018
3ULP
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BU of 3ulp by Molmil
Plasmodium falciparum SSB complex with ssDNA
Descriptor: DNA (35-MER), Single-strand binding protein
Authors:Antony, E, Lohman, T.M, Korolev, S.
Deposit date:2011-11-11
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Plasmodium falciparum SSB Tetramer Wraps Single-Stranded DNA with Similar Topology but Opposite Polarity to E. coli SSB.
J.Mol.Biol., 420, 2012
1FGU
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BU of 1fgu by Molmil
SSDNA-BINDING DOMAIN OF THE LARGE SUBUNIT OF REPLICATION PROTEIN A
Descriptor: REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT
Authors:Bochkareva, E, Belegu, V, Korolev, S, Bochkarev, A.
Deposit date:2000-07-28
Release date:2001-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the major single-stranded DNA-binding domain of replication protein A suggests a dynamic mechanism for DNA binding.
EMBO J., 20, 2001
1U5K
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BU of 1u5k by Molmil
Recombinational repair protein RecO
Descriptor: ZINC ION, hypothetical protein
Authors:Makharashvili, N, Koroleva, O, Bera, S, Grandgenett, D.P, Korolev, S.
Deposit date:2004-07-27
Release date:2004-10-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Novel Structure of DNA Repair Protein RecO from Deinococcus radiodurans
STRUCTURE, 12, 2004
1YMP
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BU of 1ymp by Molmil
The Crystal Structure of a Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve an Ankyrin Fold
Descriptor: Notch 1 protein
Authors:Lubman, O.Y, Kopan, R, Waksman, G, Korolev, S.
Deposit date:2005-01-21
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of a partial mouse Notch-1 ankyrin domain: repeats 4 through 7 preserve an ankyrin fold.
Protein Sci., 14, 2005
1L1O
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BU of 1l1o by Molmil
Structure of the human Replication Protein A (RPA) trimerization core
Descriptor: Replication protein A 14 kDa subunit, Replication protein A 32 kDa subunit, Replication protein A 70 kDa DNA-binding subunit, ...
Authors:Bochkareva, E.V, Korolev, S, Lees-Miller, S.P, Bochkarev, A.
Deposit date:2002-02-19
Release date:2002-06-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA.
EMBO J., 21, 2002

 

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