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2I9T
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BU of 2i9t by Molmil
Structure of NF-kB p65-p50 heterodimer bound to PRDII element of B-interferon promoter
Descriptor: 5'-D(*AP*GP*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*TP*CP*TP*G)-3', 5'-D(*CP*AP*GP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*CP*AP*CP*T)-3', Nuclear factor NF-kappa-B p105 subunit, ...
Authors:Escalante, C.R, Shen, L, Thanos, D, Aggarwal, A.K.
Deposit date:2006-09-06
Release date:2007-02-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of NF-kappaB p50/p65 heterodimer bound to the PRDII DNA element from the interferon-beta promoter
Structure, 10, 2002
1IF1
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BU of 1if1 by Molmil
INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
Descriptor: DNA (26-MER), PROTEIN (INTERFERON REGULATORY FACTOR 1)
Authors:Escalante, C.R, Yie, J, Thanos, D, Aggarwal, A.
Deposit date:1997-09-12
Release date:1998-02-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of IRF-1 with bound DNA reveals determinants of interferon regulation.
Nature, 391, 1998
2PI0
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BU of 2pi0 by Molmil
Crystal Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-B enhancer
Descriptor: Interferon regulatory factor 3, PRDIII-I region of human interferon-B promoter strand 1, PRDIII-I region of human interferon-B promoter strand 2
Authors:Escalante, C.R, Nistal-Villan, E, Leyi, S, Garcia-Sastre, A, Aggarwal, A.K.
Deposit date:2007-04-12
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-beta enhancer.
Mol.Cell, 26, 2007
6XB8
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BU of 6xb8 by Molmil
Adeno-Associated Virus Origin Binding Domain in complex with ssDNA
Descriptor: DNA (5'-D(*GP*CP*TP*CP*TP*T)-3'), Protein Rep68, ZINC ION
Authors:Escalante, C.R, Musayev, F.N.
Deposit date:2020-06-05
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSH
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BU of 7jsh by Molmil
Adeno-Associated Virus 2 Rep68 HD Heptamer-ssAAVS1 with ATPgS
Descriptor: DNA (5'-D(P*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*C)-3'), Protein Rep68
Authors:Escalante, C.R.
Deposit date:2020-08-14
Release date:2020-12-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSG
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BU of 7jsg by Molmil
Adeno-Associated Virus 2 Rep68 HD-Heptamer-ssDNA with ATPgS
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Protein Rep68
Authors:Escalante, C.R.
Deposit date:2020-08-14
Release date:2020-12-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSI
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BU of 7jsi by Molmil
Adeno-Associated Virus 2 Rep68 HD Hexamer-ssDNA with ATPgS
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*T)-3'), Protein Rep68
Authors:Escalante, C.R.
Deposit date:2020-08-14
Release date:2020-12-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.01 Å)
Cite:The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSF
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BU of 7jsf by Molmil
Adeno-Associated Virus Helicase domain Heptamer with ssDNA
Descriptor: DNA (5'-D(P*TP*TP*TP*T)-3'), Protein Rep68
Authors:Escalante, C.R.
Deposit date:2020-08-14
Release date:2020-12-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSE
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BU of 7jse by Molmil
Adeno-Associated Virus Origin Binding Domain in complex with ssDNA
Descriptor: DNA (5'-D(*TP*TP*TP*T)-3'), Protein Rep68
Authors:Escalante, C.R.
Deposit date:2020-08-14
Release date:2020-12-09
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
6NP6
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BU of 6np6 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Descriptor: Crp/Fnr family transcriptional regulator, GLYCEROL
Authors:Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Scarsdale, J.N, Lewis, J.P.
Deposit date:2019-01-17
Release date:2019-06-26
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Nitrosative Stress Sensing in Porphyromonas gingivalis: Structure and Mechanisms of the Heme Binding Transcriptional Regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
5V30
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BU of 5v30 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Descriptor: GLYCEROL, SULFATE ION, Transcriptional regulator
Authors:Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Lewis, J.P.
Deposit date:2017-03-06
Release date:2018-06-13
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Nitrosative stress sensing in Porphyromonas gingivalis: structure of and heme binding by the transcriptional regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
4ZO0
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BU of 4zo0 by Molmil
X-ray Structure of AAV-2 Origin Binding Domain
Descriptor: ISOPROPYL ALCOHOL, MAGNESIUM ION, Protein Rep68
Authors:Musayev, F.N, Zarate-Perez, F, Escalante, C.R.
Deposit date:2015-05-05
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Studies of AAV2 Rep68 Reveal a Partially Structured Linker and Compact Domain Conformation.
Biochemistry, 54, 2015
4ZQ9
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BU of 4zq9 by Molmil
X-ray structure of AAV-2 OBD bound to AAVS1 site 3:1
Descriptor: DNA (5'-D(*CP*GP*CP*CP*CP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*GP*GP*GP*C)-3'), MANGANESE (II) ION, ...
Authors:Musayev, F.N, Zarate-Perez, F, Escalante, C.R.
Deposit date:2015-05-08
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
J.Biol.Chem., 290, 2015
5EYB
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BU of 5eyb by Molmil
X-ray Structure of Reb1-Ter Complex
Descriptor: DNA (26-MER), DNA-binding protein reb1
Authors:Jaiswal, R, Choudhury, M, Zaman, S, Singh, S, Santosh, V, Bastia, D, Escalante, C.R.
Deposit date:2015-11-24
Release date:2016-04-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Functional architecture of the Reb1-Ter complex of Schizosaccharomyces pombe.
Proc.Natl.Acad.Sci.USA, 113, 2016
1U0J
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BU of 1u0j by Molmil
Crystal Structure of AAV2 Rep40-ADP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein
Authors:James, J.A, Aggarwal, A.K, Linden, R.M, Escalante, C.R.
Deposit date:2004-07-13
Release date:2004-08-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of adeno-associated virus type 2 Rep40-ADP complex: Insight into nucleotide recognition and catalysis by superfamily 3 helicases
Proc.Natl.Acad.Sci.USA, 101, 2004
5BYG
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BU of 5byg by Molmil
X-ray structure of AAV2 OBD-AAVS1 complex 2:1
Descriptor: CITRIC ACID, DNA (5'-D(*CP*TP*CP*GP*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*T)-3'), DNA (5'-D(*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*CP*CP*GP*A)-3'), ...
Authors:Musayev, F.N, Escalante, C.R.
Deposit date:2015-06-10
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
J.Biol.Chem., 290, 2015
3QU3
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BU of 3qu3 by Molmil
Crystal structure of IRF-7 DBD apo form
Descriptor: 1,2-ETHANEDIOL, Interferon regulatory factor 7, SODIUM ION
Authors:De Ioannes, P.E, Escalante, C.R, Aggarwal, A.K.
Deposit date:2011-02-23
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of apo IRF-3 and IRF-7 DNA binding domains: effect of loop L1 on DNA binding.
Nucleic Acids Res., 39, 2011
3QU6
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BU of 3qu6 by Molmil
Crystal structure of IRF-3 DBD free form
Descriptor: CHLORIDE ION, IRF3 protein, SODIUM ION, ...
Authors:De Ioannes, P.E, Escalante, C.R, Aggarwal, A.K.
Deposit date:2011-02-23
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of apo IRF-3 and IRF-7 DNA binding domains: effect of loop L1 on DNA binding.
Nucleic Acids Res., 39, 2011
1MX3
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BU of 1mx3 by Molmil
Crystal structure of CtBP dehydrogenase core holo form
Descriptor: ACETIC ACID, C-terminal binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kumar, V, Carlson, J.E, Ohgi, K.E, Edwards, T.E, Rose, D.W, Escalante, C.R, Aggarwal, A.K.
Deposit date:2002-10-01
Release date:2002-12-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Transcription Corepressor CtBP Is an NAD+-Regulated Dehydrogenase
Mol.Cell, 10, 2002
1S97
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BU of 1s97 by Molmil
DPO4 with GT mismatch
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*G)-3', 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Trincao, J, Johnson, R.E, Wolfle, W.T, Escalante, C.R, Prakash, S, Prakash, L, Aggarwal, A.K.
Deposit date:2004-02-03
Release date:2004-04-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dpo4 is hindered in extending a G.T mismatch by a reverse wobble
Nat.Struct.Mol.Biol., 11, 2004
1SDO
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BU of 1sdo by Molmil
Crystal Structure of Restriction Endonuclease BstYI
Descriptor: BstYI
Authors:Townson, S.A, Samuelson, J.C, Vanamee, E.S, Edwards, T.A, Escalante, C.R, Xu, S.Y, Aggarwal, A.K.
Deposit date:2004-02-13
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of BstYI at 1.85 A Resolution: A Thermophilic Restriction Endonuclease with Overlapping Specificities to BamHI and BglII
J.Mol.Biol., 338, 2004
1S9F
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BU of 1s9f by Molmil
DPO with AT matched
Descriptor: 2',3'-DIDEOXYCYTOSINE-5'-DIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Trincao, J, Johnson, R.E, Wolfle, W.T, Escalante, C.R, Prakash, S, Prakash, L, Aggarwal, A.K.
Deposit date:2004-02-04
Release date:2005-02-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dpo4 is hindered in extending a G.T mismatch by a reverse wobble
Nat.Struct.Mol.Biol., 11, 2004
1S9H
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BU of 1s9h by Molmil
Crystal Structure of Adeno-associated virus Type 2 Rep40
Descriptor: Rep 40 protein
Authors:James, J.A, Escalante, C.R, Yoon-Robarts, M, Edwards, T.A, Linden, R.M, Aggarwal, A.K.
Deposit date:2004-02-04
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the SF3 Helicase from Adeno-Associated Virus Type 2
Structure, 11, 2003
1JIH
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BU of 1jih by Molmil
Yeast DNA Polymerase ETA
Descriptor: DNA Polymerase ETA
Authors:Trincao, J, Johnson, R.E, Escalante, C.R, Prakash, S, Prakash, L, Aggarwal, A.K.
Deposit date:2001-07-02
Release date:2002-01-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of the catalytic core of S. cerevisiae DNA polymerase eta: implications for translesion DNA synthesis
Mol.Cell, 8, 2001
5BVI
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BU of 5bvi by Molmil
X-ray Structure of Interferon Regulatory Factor 4 IAD Domain
Descriptor: CHLORIDE ION, Interferon regulatory factor 4
Authors:Escalate, C.R, Remesh, S.G.
Deposit date:2015-06-05
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Studies of IRF4 Reveal a Flexible Autoinhibitory Region and a Compact Linker Domain.
J.Biol.Chem., 290, 2015

 

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