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4QC8
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BU of 4qc8 by Molmil
Structural annotation of pathogenic bovine Parvovirus-1
Descriptor: VP2
Authors:Kailasan, S, Halder, S, Gurda, B.L, Bladek, H, Chipman, P.R, McKenna, R, Brown, K, Agbandje-McKenna, M.
Deposit date:2014-05-09
Release date:2015-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of an enteric pathogen, bovine parvovirus.
J.Virol., 89, 2015
2X5I
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BU of 2x5i by Molmil
Crystal structure echovirus 7
Descriptor: LAURIC ACID, VP1, VP2, ...
Authors:Plevka, P, Hafenstein, S, Zhang, Y, Bowman, V.D, Chipman, P.R, Bator, C.M, Rossmann, M.G.
Deposit date:2010-02-08
Release date:2010-12-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Interaction of Decay-Accelerating Factor with Echovirus 7.
J.Virol., 84, 2010
3C6R
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BU of 3c6r by Molmil
Low pH Immature Dengue Virus
Descriptor: Envelope protein, Peptide pr
Authors:Yu, I, Zhang, W, Holdway, H.A, Li, L, Kostyuchenko, V.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J.
Deposit date:2008-02-05
Release date:2008-04-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (25 Å)
Cite:Structure of the immature dengue virus at low pH primes proteolytic maturation
Science, 319, 2008
1TJA
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BU of 1tja by Molmil
Fitting of gp8, gp9, and gp11 into the cryo-EM reconstruction of the bacteriophage T4 contracted tail
Descriptor: Baseplate structural protein Gp11, Baseplate structural protein Gp8, Baseplate structural protein Gp9
Authors:Leiman, P.G, Chipman, P.R, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2004-06-03
Release date:2004-08-31
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Three-dimensional rearrangement of proteins in the tail of bacteriophage t4 on infection of its host
Cell(Cambridge,Mass.), 118, 2004
1UON
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BU of 1uon by Molmil
REOVIRUS POLYMERASE LAMBDA-3 LOCALIZED BY ELECTRON CRYOMICROSCOPY OF VIRIONS AT 7.6-A RESOLUTION
Descriptor: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, 5'-R(*GP*GP*GP*GP*GP*)-3', 5'-R(*UP*AP*GP*CP*CP*CP*CP*CP*)-3', ...
Authors:Zhang, X, Walker, S.B, Chipman, P.R, Nibert, M.L, Baker, T.S.
Deposit date:2003-09-21
Release date:2003-11-13
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Reovirus Polymerase Lambda3 Localized by Cryo-Electron Microscopy of Virions at a Resolution of 7.6 A
Nat.Struct.Biol., 10, 2003
1P58
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BU of 1p58 by Molmil
Complex Organization of Dengue Virus Membrane Proteins as Revealed by 9.5 Angstrom Cryo-EM reconstruction
Descriptor: Envelope protein M, Major envelope protein E
Authors:Zhang, W, Chipman, P.R, Corver, J, Johnson, P.R, Zhang, Y, Mukhopadhyay, S, Baker, T.S, Strauss, J.H, Rossmann, M.G, Kuhn, R.J.
Deposit date:2003-04-25
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Visualization of membrane protein domains by cryo-electron microscopy of dengue virus
Nat.Struct.Biol., 10, 2003
1Z7Z
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BU of 1z7z by Molmil
Cryo-em structure of human coxsackievirus A21 complexed with five domain icam-1kilifi
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Intercellular adhesion molecule-1, human coxsackievirus A21
Authors:Xiao, C, Bator-Kelly, C.M, Rieder, E, Chipman, P.R, Craig, A, Kuhn, R.J, Wimmer, E, Rossmann, M.G.
Deposit date:2005-03-28
Release date:2005-08-02
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (8 Å)
Cite:The crystal structure of coxsackievirus a21 and its interaction with icam-1.
Structure, 13, 2005
1Z7S
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BU of 1z7s by Molmil
The crystal structure of coxsackievirus A21
Descriptor: CALCIUM ION, GUANOSINE-5'-MONOPHOSPHATE, Human COXSACKIEVIRUS A21, ...
Authors:Xiao, C, Bator-Kelly, C.M, Rieder, E, Chipman, P.R, Craig, A, Kuhn, R.J, Wimmer, E, Rossmann, M.G.
Deposit date:2005-03-28
Release date:2005-08-02
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of coxsackievirus a21 and its interaction with icam-1.
Structure, 13, 2005
1YXN
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BU of 1yxn by Molmil
Pseudo-atomic model of a fiberless isometric variant of bacteriophage phi29
Descriptor: Major head protein
Authors:Morais, M.C, Choi, K.H, Koti, J.S, Chipman, P.R, Anderson, D.L, Rossmann, M.G.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Conservation of the Capsid Structure in Tailed dsDNA Bacteriophages: the Pseudoatomic Structure of phi29
Mol.Cell, 18, 2005
1Z8Y
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BU of 1z8y by Molmil
Mapping the E2 Glycoprotein of Alphaviruses
Descriptor: Capsid protein C, Spike glycoprotein E1, Spike glycoprotein E2
Authors:Mukhopadhyay, S, Zhang, W, Gabler, S, Chipman, P.R, Strauss, E.G, Strauss, J.H, Baker, T.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2005-03-31
Release date:2006-02-07
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Mapping the structure and function of the E1 and E2 glycoproteins in alphaviruses.
Structure, 14, 2006
2B6B
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BU of 2b6b by Molmil
Cryo EM structure of Dengue complexed with CRD of DC-SIGN
Descriptor: CD209 antigen, envelope glycoprotein
Authors:Pokidysheva, E, Zhang, Y, Battisti, A.J, Bator-Kelly, C.M, Chipman, P.R, Gregorio, G, Hendrickson, W.A, Kuhn, R.J, Rossmann, M.G.
Deposit date:2005-09-30
Release date:2006-03-07
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (25 Å)
Cite:Cryo-EM reconstruction of dengue virus in complex with the carbohydrate recognition domain of DC-SIGN
Cell(Cambridge,Mass.), 124, 2006
2BSG
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BU of 2bsg by Molmil
The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4
Descriptor: FIBRITIN
Authors:Kostyuchenko, V.A, Chipman, P.R, Leiman, P.G, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2005-05-20
Release date:2005-09-21
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (15 Å)
Cite:The Tail Structure of Bacteriophage T4 and its Mechanism of Contraction.
Nat.Struct.Mol.Biol., 12, 2005
1K28
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BU of 1k28 by Molmil
The Structure of the Bacteriophage T4 Cell-Puncturing Device
Descriptor: BASEPLATE STRUCTURAL PROTEIN GP27, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Kanamaru, S, Leiman, P.G, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Arisaka, F, Rossmann, M.G.
Deposit date:2001-09-26
Release date:2002-02-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the cell-puncturing device of bacteriophage T4.
Nature, 415, 2002
1K4R
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BU of 1k4r by Molmil
Structure of Dengue Virus
Descriptor: MAJOR ENVELOPE PROTEIN E
Authors:Kuhn, R.J, Zhang, W, Rossmann, M.G, Pletnev, S.V, Corver, J, Lenches, E, Jones, C.T, Mukhopadhyay, S, Chipman, P.R, Strauss, E.G, Baker, T.S, Strauss, J.H.
Deposit date:2001-10-08
Release date:2002-03-13
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Structure of dengue virus: implications for flavivirus organization, maturation, and fusion.
Cell(Cambridge,Mass.), 108, 2002
1M06
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BU of 1m06 by Molmil
Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography
Descriptor: 5'-D(P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR))-3', Capsid Protein, Major spike protein, ...
Authors:Bernal, R.A, Hafenstein, S, Olson, N.H, Bowman, V, Chipman, P.R, Baker, T.S, Fane, B.A, Rossmann, M.G.
Deposit date:2002-06-12
Release date:2002-12-25
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Studies of Bacteriophage alpha3 Assembly
J.Mol.Biol., 325, 2003
1M11
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BU of 1m11 by Molmil
structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy
Descriptor: COAT PROTEIN VP1, COAT PROTEIN VP2, COAT PROTEIN VP3, ...
Authors:He, Y, Lin, F, Chipman, P.R, Bator, C.M, Baker, T.S, Shoham, M, Kuhn, R.J, Medof, M.E, Rossmann, M.G.
Deposit date:2002-06-17
Release date:2002-08-28
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structure of decay-accelerating factor bound to echovirus 7: a virus-receptor complex.
Proc.Natl.Acad.Sci.USA, 99, 2002
1M0F
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BU of 1m0f by Molmil
Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy
Descriptor: Capsid Protein F, Major Spike Protein G, Scaffolding Protein B, ...
Authors:Bernal, R.A, Hafenstein, S, Olson, N.H, Bowman, V.D, Chipman, P.R, Baker, T.S, Fane, B.A, Rossmann, M.G.
Deposit date:2002-06-12
Release date:2002-12-25
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structural Studies of Bacteriophage alpha3 Assembly
J.Mol.Biol., 325, 2003
1PDM
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BU of 1pdm by Molmil
Fitting of gp8 structure into the cryoEM reconstruction of the bacteriophage T4 baseplate
Descriptor: Baseplate structural protein Gp8
Authors:Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2003-05-19
Release date:2003-09-09
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDL
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BU of 1pdl by Molmil
Fitting of gp5 in the cryoEM reconstruction of the bacteriophage T4 baseplate
Descriptor: Tail-associated lysozyme
Authors:Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2003-05-19
Release date:2003-09-09
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDJ
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BU of 1pdj by Molmil
Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate
Descriptor: Baseplate structural protein Gp27
Authors:Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2003-05-19
Release date:2003-09-09
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
2OF6
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BU of 2of6 by Molmil
Structure of immature West Nile virus
Descriptor: envelope glycoprotein E
Authors:Zhang, Y, Kaufmann, B, Chipman, P.R, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-01-02
Release date:2007-04-03
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Structure of immature west nile virus.
J.Virol., 81, 2007
2QZH
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BU of 2qzh by Molmil
SCR2/3 of DAF from the NMR structure 1nwv fitted into a cryoEM reconstruction of CVB3-RD complexed with DAF
Descriptor: Complement decay-accelerating factor
Authors:Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
Deposit date:2007-08-16
Release date:2007-10-30
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
2R29
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BU of 2r29 by Molmil
Neutralization of dengue virus by a serotype cross-reactive antibody elucidated by cryoelectron microscopy and x-ray crystallography
Descriptor: Envelope protein E, Heavy chain of Fab 1A1D-2, Light chain of Fab 1A1D-2
Authors:Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-08-24
Release date:2007-12-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
2QZF
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BU of 2qzf by Molmil
SCR1 of DAF from 1ojv fitted into cryoEM density
Descriptor: Complement decay-accelerating factor
Authors:Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
Deposit date:2007-08-16
Release date:2007-10-30
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
2QZD
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BU of 2qzd by Molmil
Fitted structure of SCR4 of DAF into cryoEM density
Descriptor: Complement decay-accelerating factor
Authors:Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
Deposit date:2007-08-16
Release date:2007-10-30
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007

 

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