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1V0O
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BU of 1v0o by Molmil
Structure of P. falciparum PfPK5-Indirubin-5-sulphonate ligand complex
Descriptor: 2',3-DIOXO-1,1',2',3-TETRAHYDRO-2,3'-BIINDOLE-5'-SULFONIC ACID, CELL DIVISION CONTROL PROTEIN 2 HOMOLOG
Authors:Holton, S, Merckx, A, Burgess, D, Doerig, C, Noble, M, Endicott, J.
Deposit date:2004-03-31
Release date:2004-04-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
1YQQ
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BU of 1yqq by Molmil
Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
Descriptor: GUANINE, PHOSPHATE ION, Xanthosine phosphorylase
Authors:Dandanell, G, Szczepanowski, R.H, Kierdaszuk, B, Shugar, D, Bochtler, M.
Deposit date:2005-02-02
Release date:2005-04-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Escherichia coli Purine Nucleoside Phosphorylase II, the Product of the xapA Gene
J.Mol.Biol., 348, 2005
1V0P
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BU of 1v0p by Molmil
Structure of P. falciparum PfPK5-Purvalanol B ligand complex
Descriptor: CELL DIVISION CONTROL PROTEIN 2 HOMOLOG, PURVALANOL B
Authors:Holton, S, Merckx, A, Burgess, D, Doerig, C, Noble, M, Endicott, J.
Deposit date:2004-04-01
Release date:2004-05-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
1YO2
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BU of 1yo2 by Molmil
Proton Transfer from His200 in Human Carbonic Anhydrase II
Descriptor: Carbonic anhydrase II, ZINC ION
Authors:Bhatt, D, Tu, C, Fisher, S.Z, Hernandez Prada, J.A, McKenna, R, Silverman, D.N.
Deposit date:2005-01-26
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Proton transfer in a Thr200His mutant of human carbonic anhydrase II
Proteins, 61, 2005
1YOB
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BU of 1yob by Molmil
C69A Flavodoxin II from Azotobacter vinelandii
Descriptor: FLAVIN MONONUCLEOTIDE, Flavodoxin 2, SULFATE ION
Authors:Alagaratnam, S, van Pouderoyen, G, Pijning, T, Dijkstra, B.W, Cavazzini, D, Rossi, G.L, Canters, G.W.
Deposit date:2005-01-27
Release date:2005-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A crystallographic study of Cys69Ala flavodoxin II from Azotobacter vinelandii: structural determinants of redox potential
Protein Sci., 14, 2005
7PJB
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BU of 7pjb by Molmil
Crystal structure of YTHDC1 with compound PSI_DC1_004
Descriptor: (R)-homoproline, GLYCEROL, SULFATE ION, ...
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2021-08-23
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
6Z01
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BU of 6z01 by Molmil
DNA Topoisomerase
Descriptor: CHLORIDE ION, DNA topoisomerase I
Authors:Takahashi, T.S, Gadelle, D, Forterre, P, Mayer, C, Petrella, S.
Deposit date:2020-05-07
Release date:2021-11-17
Last modified:2023-05-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Topoisomerase I (TOP1) dynamics: conformational transition from open to closed states.
Nat Commun, 13, 2022
6Z03
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BU of 6z03 by Molmil
DNA Topoisomerase
Descriptor: DNA topoisomerase I
Authors:Takahashi, T.S, Gadelle, D, Forterre, P, Mayer, C, Petrella, S.
Deposit date:2020-05-07
Release date:2021-11-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Topoisomerase I (TOP1) dynamics: conformational transition from open to closed states.
Nat Commun, 13, 2022
1YSD
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BU of 1ysd by Molmil
Yeast Cytosine Deaminase Double Mutant
Descriptor: CALCIUM ION, Cytosine deaminase, ZINC ION
Authors:Korkegian, A, Black, M.E, Baker, D, Stoddard, B.L.
Deposit date:2005-02-08
Release date:2005-05-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Computational thermostabilization of an enzyme.
Science, 308, 2005
1YSP
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BU of 1ysp by Molmil
Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.
Descriptor: SULFATE ION, Transcriptional regulator kdgR
Authors:Bochkarev, A, Lunin, V.V, Ezersky, A, Evdokimova, E, Skarina, T, Xu, X, Borek, D, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-02-08
Release date:2005-03-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study of effector binding specificity in IclR transcriptional regulators
To be Published
7PJ8
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BU of 7pj8 by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_225
Descriptor: N-methyl-1H-indole-4-carboxamide, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2021-08-23
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
6Z3E
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BU of 6z3e by Molmil
Crystal structure of GDP-bound human GIMAP5, amino acid residues 1-276
Descriptor: GTPase IMAP family member 5, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Schwefel, D, Daumke, O.
Deposit date:2020-05-20
Release date:2021-12-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.800387 Å)
Cite:Crystal structure of GDP-bound human GIMAP5
To Be Published
7PJP
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BU of 7pjp by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_226
Descriptor: 5-(furan-2-yl)-N-methyl-1H-pyrazole-3-carboxamide, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2021-08-24
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
1YT8
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BU of 1yt8 by Molmil
Crystal Structure of Thiosulfate sulfurtransferase from Pseudomonas aeruginosa
Descriptor: GLYCEROL, SULFITE ION, thiosulfate sulfurtransferase
Authors:Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-02-10
Release date:2005-03-22
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Thiosulfate sulfurtransferase from Pseudomonas aeruginosa
To be Published
7PER
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BU of 7per by Molmil
Model of the inner ring of the human nuclear pore complex
Descriptor: Nuclear pore complex protein Nup155, Nuclear pore complex protein Nup205, Nuclear pore complex protein Nup93, ...
Authors:Schuller, A.P, Wojtynek, M, Mankus, D, Tatli, M, Kronenberg-Tenga, R, Regmi, S.G, Dasso, M, Weis, K, Medalia, O, Schwartz, T.U.
Deposit date:2021-08-11
Release date:2021-10-20
Last modified:2021-11-24
Method:ELECTRON MICROSCOPY (35 Å)
Cite:The cellular environment shapes the nuclear pore complex architecture.
Nature, 598, 2021
7PJ9
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BU of 7pj9 by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_232
Descriptor: 5-bromanyl-N-methyl-1H-indazole-3-carboxamide, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2021-08-23
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
1SEG
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BU of 1seg by Molmil
Crystal structure of a toxin chimera between Lqh-alpha-IT from the scorpion Leiurus quinquestriatus hebraeus and AAH2 from Androctonus australis hector
Descriptor: AAH2: LQH-ALPHA-IT (FACE) CHIMERIC TOXIN, NITRATE ION, PROPANOIC ACID, ...
Authors:Karbat, I, Frolow, F, Froy, O, Gilles, N, Cohen, L, Turkov, M, Gordon, D, Gurevitz, M.
Deposit date:2004-02-17
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Molecular basis of the high insecticidal potency of scorpion alpha-toxins.
J.Biol.Chem., 279, 2004
1YNP
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BU of 1ynp by Molmil
aldo-keto reductase AKR11C1 from Bacillus halodurans (apo form)
Descriptor: GLYCEROL, SODIUM ION, SULFATE ION, ...
Authors:Marquardt, T, Kostrewa, D, Winkler, F.K, Li, X.D.
Deposit date:2005-01-25
Release date:2005-12-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:High-resolution Crystal Structure of AKR11C1 from Bacillus halodurans: An NADPH-dependent 4-Hydroxy-2,3-trans-nonenal Reductase
J.Mol.Biol., 354, 2005
1YO4
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BU of 1yo4 by Molmil
Solution Structure of the SARS Coronavirus ORF 7a coded X4 protein
Descriptor: Hypothetical protein X4
Authors:Haenel, K, Stangler, T, Stoldt, M, Willbold, D.
Deposit date:2005-01-26
Release date:2006-01-17
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of the X4 protein coded by the SARS related coronavirus reveals an immunoglobulin like fold and suggests a binding activity to integrin I domains.
J.Biomed.Sci., 13, 2006
1SEN
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BU of 1sen by Molmil
Endoplasmic reticulum protein Rp19 O95881
Descriptor: CHLORIDE ION, PLATINUM (II) ION, Thioredoxin-like protein p19
Authors:Liu, Z.-J, Chen, L, Tempel, W, Shah, A, Lee, D, Dailey, T.A, Mayer, M.R, Rose, J.P, Richardson, D.C, Richardson, J.S, Dailey, H.A, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-02-17
Release date:2004-07-13
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:Endoplasmic reticulum protein Rp19
To be Published
7PKX
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BU of 7pkx by Molmil
Crystal structure of a DyP-type peroxidase from Bacillus subtilis in P3121 space group
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Borges, P.T, Rodrigues, C, Silva, D, Taborda, A, Brissos, V, Frazao, C, Martins, L.O.
Deposit date:2021-08-27
Release date:2021-10-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:Loops around the Heme Pocket Have a Critical Role in the Function and Stability of Bs DyP from Bacillus subtilis .
Int J Mol Sci, 22, 2021
8BLO
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BU of 8blo by Molmil
Human Urea Transporter UT-A (N-Terminal Domain Model)
Descriptor: Lauryl Maltose Neopentyl Glycol, Urea transporter 2, di-heneicosanoyl phosphatidyl choline
Authors:Chi, G, Pike, A.C.W, Maclean, E.M, Mukhopadhyay, S.M.M, Bohstedt, T, Scacioc, A, Wang, D, McKinley, G, Fernandez-Cid, A, Arrowsmith, C.H, Bountra, C, Edwards, A, Burgess-Brown, N.A, van Putte, W, Duerr, K.
Deposit date:2022-11-10
Release date:2023-10-04
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural characterization of human urea transporters UT-A and UT-B and their inhibition.
Sci Adv, 9, 2023
3GDF
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BU of 3gdf by Molmil
Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum.
Descriptor: Probable NADP-dependent mannitol dehydrogenase, ZINC ION
Authors:Nuess, D, Goettig, P, Magler, I, Denk, U, Breitenbach, M, Schneider, P.B, Brandstetter, H, Simon-Nobbe, B.
Deposit date:2009-02-24
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum: Implications for oligomerisation and catalysis.
Biochimie, 92, 2010
1H2Z
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BU of 1h2z by Molmil
PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, S554A MUTANT WITH BOUND PEPTIDE LIGAND SUC-GLY-PRO
Descriptor: GLYCEROL, GLYCINE, PROLINE, ...
Authors:Rea, D, Fulop, V.
Deposit date:2002-08-20
Release date:2002-11-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Electrostatic Effects and Binding Determinants in the Catalysis of Prolyl Oligopeptidase: Site Specific Mutagenesis at the Oxyanion Binding Site
J.Biol.Chem., 277, 2002
7PL0
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BU of 7pl0 by Molmil
Crystal structure of a DyP-type peroxidase 5G5 variant from Bacillus subtilis
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Borges, P.T, Rodrigues, C, Silva, D, Taborda, A, Brissos, V, Frazao, C, Martins, L.O.
Deposit date:2021-08-27
Release date:2021-10-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Loops around the Heme Pocket Have a Critical Role in the Function and Stability of Bs DyP from Bacillus subtilis .
Int J Mol Sci, 22, 2021

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