Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8ZWM
DownloadVisualize
BU of 8zwm by Molmil
Heparin bound Tau fibril polymorph 4
Descriptor: Isoform Tau-F of Microtubule-associated protein tau
Authors:Tao, Y.Q, Liu, C, Li, D.
Deposit date:2024-06-13
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Heparin bound Tau fibril polymorph 4
To Be Published
8YTD
DownloadVisualize
BU of 8ytd by Molmil
Crystal Structure of TrkA D5 domain in complex with two different macrocyclic peptides
Descriptor: 1,2-ETHANEDIOL, High affinity nerve growth factor receptor, Macrocyclic Peptide
Authors:Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H.
Deposit date:2024-03-25
Release date:2024-07-10
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists.
J.Med.Chem., 67, 2024
8YTE
DownloadVisualize
BU of 8yte by Molmil
Crystal Structure of TrkA D5 domain in complex with macrocyclic peptide
Descriptor: 1,2-ETHANEDIOL, AMINOMETHYLAMIDE, High affinity nerve growth factor receptor, ...
Authors:Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H.
Deposit date:2024-03-25
Release date:2024-07-10
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists.
J.Med.Chem., 67, 2024
7AEH
DownloadVisualize
BU of 7aeh by Molmil
SARS-CoV-2 main protease in a covalent complex with a pyridine derivative of ABT-957, compound 1
Descriptor: (2~{R})-5-oxidanylidene-~{N}-[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(pyridin-2-ylmethylamino)butan-2-yl]-1-(phenylmethyl)pyrrolidine-2-carboxamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
Authors:Owen, C.D, Redhead, M.A, Lukacik, P, Strain-Damerell, C, Fearon, D, Brewitz, L, Collette, A, Robinson, C, Collins, P, Radoux, C, Navratilova, I, Douangamath, A, von Delft, F, Malla, T.R, Nugen, T, Hull, H, Tumber, A, Schofield, C.J, Hallet, D, Stuart, D.I, Hopkins, A.L, Walsh, M.A.
Deposit date:2020-09-17
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19.
Sci Rep, 11, 2021
8Y7G
DownloadVisualize
BU of 8y7g by Molmil
Crystal structure of the Marinitoga sp. Csx1-Crn2 H495A mutant in complex with cyclic-tetraadenylate (cA4)
Descriptor: ACETATE ION, CRISPR-associated protein, RNA (5'-R(P*AP*A)-3'), ...
Authors:Zhang, D, Yuan, C, Lin, Z.
Deposit date:2024-02-04
Release date:2024-07-17
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system.
Nucleic Acids Res., 52, 2024
8Y75
DownloadVisualize
BU of 8y75 by Molmil
Crystal structure of the CARF-HTH domain of Csx1-Crn2 from Marinitoga sp.
Descriptor: CRISPR-associated protein
Authors:Zhang, D, Yuan, C, Lin, Z.
Deposit date:2024-02-03
Release date:2024-07-17
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system.
Nucleic Acids Res., 52, 2024
8Y85
DownloadVisualize
BU of 8y85 by Molmil
Human AE3 with NaHCO3- and DIDS
Descriptor: 2,2'-ethane-1,2-diylbis{5-[(sulfanylmethyl)amino]benzenesulfonic acid}, Anion exchange protein 3, BICARBONATE ION
Authors:Jian, L, Zhang, Q, Yao, D, Wang, Q, Xia, Y, Qin, A, Cao, Y.
Deposit date:2024-02-05
Release date:2024-07-31
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:The structural insight into the functional modulation of human anion exchanger 3.
Nat Commun, 15, 2024
8Y86
DownloadVisualize
BU of 8y86 by Molmil
Human AE3 with NaHCO3-
Descriptor: Anion exchange protein 3, BICARBONATE ION
Authors:Jian, L, Zhang, Q, Yao, D, Cao, Y.
Deposit date:2024-02-06
Release date:2024-07-31
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:The structural insight into the functional modulation of human anion exchanger 3.
Nat Commun, 15, 2024
8Y6Z
DownloadVisualize
BU of 8y6z by Molmil
Crystal structure of the Marinitoga sp. Csx1-Crn2 fusion ribonuclease of type III CRISPR
Descriptor: CRISPR-associated protein
Authors:Zhang, D, Yuan, C.
Deposit date:2024-02-03
Release date:2024-07-17
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system.
Nucleic Acids Res., 52, 2024
8ZLE
DownloadVisualize
BU of 8zle by Molmil
hAE3NTD2TMD with PT5,CLR, and Y01
Descriptor: CHOLESTEROL, CHOLESTEROL HEMISUCCINATE, [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate, ...
Authors:Jian, L, Zhang, Q, Yao, D, Wang, Q, Xia, Y, Qin, A, Cao, Y.
Deposit date:2024-05-19
Release date:2024-07-31
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:The structural insight into the functional modulation of human anion exchanger 3.
Nat Commun, 15, 2024
8Y8K
DownloadVisualize
BU of 8y8k by Molmil
The structure of hAE3
Descriptor: Anion exchange protein 3
Authors:Jian, L, Zhang, Q, Yao, D, Wang, Q, Xia, Y, Qin, A, Cao, Y.
Deposit date:2024-02-06
Release date:2024-07-31
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:The structural insight into the functional modulation of human anion exchanger 3.
Nat Commun, 15, 2024
8Y7F
DownloadVisualize
BU of 8y7f by Molmil
Crystal structure of CARF domain-truncated Csx1-Crn2 from Marinitoga sp.
Descriptor: CRISPR-associated protein
Authors:Zhang, D, Yuan, C, Lin, Z.
Deposit date:2024-02-04
Release date:2024-07-17
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system.
Nucleic Acids Res., 52, 2024
8ZMV
DownloadVisualize
BU of 8zmv by Molmil
Structure of a triple-helix region of human Collagen type XVII from Trautec
Descriptor: collagen type XVII
Authors:Chu, Y, Zhai, Y, Fan, X, Fu, S, Li, J, Wu, X, Cai, H, Wang, X, Li, D, Feng, P, Cao, K, Qian, S.
Deposit date:2024-05-24
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a triple-helix region of human Collagen type XVII from Trautec
To Be Published
7ZFW
DownloadVisualize
BU of 7zfw by Molmil
Structure of human 80S ribosome obtained from ssDNA coated grid
Descriptor: RNA (615-MER)
Authors:Hrebik, D, Plevka, P.
Deposit date:2022-04-01
Release date:2022-11-23
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Polyelectrolyte coating of cryo-EM grids improves lateral distribution and prevents aggregation of macromolecules.
Acta Crystallogr D Struct Biol, 78, 2022
9D6M
DownloadVisualize
BU of 9d6m by Molmil
Nitrile hydratase BR157K mutant
Descriptor: Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta
Authors:Miller, C.G, Holz, R.C, Liu, D, Kaley, N.
Deposit date:2024-08-15
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Role of second-sphere arginine residues in metal binding and metallocentre assembly in nitrile hydratases.
J Inorg Biochem, 256, 2024
7ZOA
DownloadVisualize
BU of 7zoa by Molmil
cryo-EM structure of CGT ABC transporter in presence of CBG substrate
Descriptor: Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, Cyclooctadecakis-(1-2)-(beta-D-glucopyranose)
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-24
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
9D65
DownloadVisualize
BU of 9d65 by Molmil
Nitrile hydratase BR52A mutant
Descriptor: Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta
Authors:Miller, C.G, Holz, R.C, Liu, D, Kaley, N.
Deposit date:2024-08-14
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Role of second-sphere arginine residues in metal binding and metallocentre assembly in nitrile hydratases.
J Inorg Biochem, 256, 2024
7ZO8
DownloadVisualize
BU of 7zo8 by Molmil
cryo-EM structure of CGT ABC transporter in nanodisc apo state
Descriptor: Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, DIUNDECYL PHOSPHATIDYL CHOLINE
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-24
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
7ZO9
DownloadVisualize
BU of 7zo9 by Molmil
cryo-EM structure of CGT ABC transporter in vanadate trapped state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, VANADATE ION
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-24
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
9D6J
DownloadVisualize
BU of 9d6j by Molmil
Nitrile hydratase BR52K mutant
Descriptor: Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta
Authors:Miller, C.G, Holz, R.C, Liu, D, Kaley, N.
Deposit date:2024-08-15
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Role of second-sphere arginine residues in metal binding and metallocentre assembly in nitrile hydratases.
J Inorg Biochem, 256, 2024
7ZNU
DownloadVisualize
BU of 7znu by Molmil
cryo-EM structure of CGT ABC transporter in detergent micelle
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, VANADATE ION
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-22
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
7ZZ6
DownloadVisualize
BU of 7zz6 by Molmil
Cryo-EM structure of "CT-CT dimer" of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, PYRUVIC ACID, ...
Authors:Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
Deposit date:2022-05-25
Release date:2022-12-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.15 Å)
Cite:CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
8A6M
DownloadVisualize
BU of 8a6m by Molmil
Phosphatidylserine-dependent synaptic vesicle membrane sculpting by synaptogyrin
Descriptor: Isoform 1B of Synaptogyrin-1
Authors:Yu, T.K, Eastep, G.N, Flores, D, Zweckstetter, M.
Deposit date:2022-06-18
Release date:2023-05-24
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Phosphatidylserine-dependent structure of synaptogyrin remodels the synaptic vesicle membrane.
Nat.Struct.Mol.Biol., 30, 2023
1NI0
DownloadVisualize
BU of 1ni0 by Molmil
Structure of the Y94F mutant of the restriction endonuclease PvuII
Descriptor: Type II restriction enzyme PvuII
Authors:Tucker, P.A, Kokkinidis, M, Nicolaki, S, Kotsifaki, D.
Deposit date:2002-12-20
Release date:2003-02-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Y94F mutant of the restriction endonuclease PvuII
To be Published
1NIP
DownloadVisualize
BU of 1nip by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII
Descriptor: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Komiya, H, Georgiadis, M.M, Chakrabarti, P, Woo, D, Kornuc, J.J, Rees, D.C.
Deposit date:1992-09-29
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic structure of the nitrogenase iron protein from Azotobacter vinelandii.
Science, 257, 1992

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon